version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3158 42.86 -1 3370252..3370398 - 48 170683937 - EcSMS35_3295 - hypothetical protein 3159 54.47 0 3370449..3371612 + 387 170682079 yqhD EcSMS35_3296 - alcohol dehydrogenase yqhD 3160 50.85 0 3371717..3372544 + 275 170682599 dkgA EcSMS35_3297 - 2,5-didehydrogluconate reductase A 3161 47.03 0 3372744..3373670 + 308 170680772 - EcSMS35_3298 - hypothetical protein 3162 48.84 0 3373721..3373978 + 85 170681297 - EcSMS35_3299 - putative lipoprotein 3163 54.37 0 3374020..3376239 - 739 170681820 - EcSMS35_3300 - radical SAM domain-containing protein 3164 44.27 -1 3376491..3377240 + 249 170684305 - EcSMS35_3301 - GntR family transcriptional regulator 3165 47.79 0 3377563..3379035 + 490 170683628 - EcSMS35_3302 - mannitol dehydrogenase 3166 47.10 0 3379032..3380048 + 338 170683214 - EcSMS35_3303 - zinc-binding dehydrogenase family protein 3167 47.38 0 3380059..3381069 + 336 170680163 - EcSMS35_3304 - malate/L-lactate dehydrogenase family protein 3168 41.87 -1 3381142..3382125 + 327 170683750 - EcSMS35_3305 - TRAP transporter solute receptor DctP family protein 3169 45.98 0 3382660..3383964 + 434 170682721 - EcSMS35_3307 - TRAP transporter, DctM subunit 3170 56.05 +1 3384035..3385447 - 470 170682156 sufI EcSMS35_3308 - protein SufI 3171 49.46 0 3385522..3386259 - 245 170681677 plsC EcSMS35_3309 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 3172 54.54 0 3386493..3388751 - 752 170681468 parC EcSMS35_3310 - DNA topoisomerase IV, A subunit 3173 52.55 0 3388889..3390496 - 535 170680624 - EcSMS35_3311 - solute-binding family 5 protein 3174 52.59 0 3390605..3391087 - 160 170679982 - EcSMS35_3312 - transcription activator effector binding domain/DNA gyrase inhibitor domain-containing protein 3175 50.38 0 3391140..3391532 - 130 170682123 - EcSMS35_3313 - hypothetical protein 3176 52.42 0 3391684..3392343 + 219 170683979 qseB EcSMS35_3314 - transcriptional regulatory protein QseB 3177 52.37 0 3392340..3393689 + 449 170682051 qseC EcSMS35_3315 - sensor histidine kinase QseC 3178 50.86 0 3393799..3394380 + 193 170682575 mdaB EcSMS35_3316 - modulator of drug activity B 3179 51.11 0 3394411..3394725 + 104 170681782 ygiN EcSMS35_3317 - quinol monooxygenase YgiN 3180 52.03 0 3394770..3395657 - 295 170681276 fitR EcSMS35_3318 - iron transport system regulatory protein FitR 3181 49.26 0 3395654..3396601 - 315 170681989 fitE EcSMS35_3319 - iron ABC transporter, periplasmic iron-binding protein FitE 3182 50.57 0 3396612..3397661 - 349 170683833 fitD EcSMS35_3320 - iron ABC transporter, permease protein FitD 3183 54.07 0 3397658..3398641 - 327 170683279 fitC EcSMS35_3321 - iron ABC transporter, permease protein FitC 3184 49.51 0 3398638..3399447 - 269 170680408 fitB EcSMS35_3322 - iron ABC transporter, ATP binding protein FitB 3185 23.33 -2 3399527..3399646 - 39 170679905 - EcSMS35_3323 - hypothetical protein 3186 47.81 0 3399821..3401962 + 713 170681849 fitA EcSMS35_3324 - TonB-dependent outer membrane ferric coprogen receptor FitA 3187 54.09 0 3402026..3403918 - 630 170679703 parE EcSMS35_3325 - DNA topoisomerase IV, B subunit 3188 53.78 0 3403947..3404528 - 193 170684219 yqiA EcSMS35_3326 - esterase YqiA 3189 56.76 +1 3404528..3405355 - 275 170683396 icc EcSMS35_3327 - protein icc 3190 48.23 0 3405380..3405802 - 140 170682587 - EcSMS35_3328 - hypothetical protein 3191 50.48 0 3405803..3406432 - 209 170683347 - EcSMS35_3329 - NUDIX family hydrolase 3192 51.01 0 3406637..3408118 + 493 170682545 tolC EcSMS35_3330 - outer membrane protein TolC 3193 56.40 +1 3408266..3408937 + 223 170681724 - EcSMS35_3331 - hypothetical protein 3194 50.90 0 3408943..3410103 + 386 170681476 - EcSMS35_3332 - glutathionylspermidine synthase family protein 3195 48.64 0 3410588..3412384 + 598 170680035 - EcSMS35_3333 - arylsulfate sulfotransferase 3196 44.84 -1 3412402..3413070 + 222 170681695 - EcSMS35_3334 - DsbA family thioredoxin 3197 48.40 0 3413100..3413756 + 218 170681279 - EcSMS35_3335 - DsbB family disulfide bond formation protein 3198 54.12 0 3413802..3414590 - 262 170680476 - EcSMS35_3336 - aromatic ring-opening dioxygenase 3199 52.97 0 3414733..3415506 + 257 170679914 zupT EcSMS35_3337 - zinc transporter ZupT 3200 41.54 -1 3415564..3415758 - 64 170679608 - EcSMS35_3338 - hypothetical protein 3201 52.75 0 3415996..3416649 - 217 170683968 ribB EcSMS35_3339 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 3202 47.50 0 3416963..3417322 + 119 170684291 - EcSMS35_3340 - hypothetical protein 3203 42.79 -1 3417357..3417557 - 66 170683608 glgS EcSMS35_3341 - glycogen synthesis protein GlgS 3204 42.22 -1 3417826..3418455 + 209 170682259 - EcSMS35_3342 - putative inner membrane protein 3205 50.90 0 3418482..3420143 + 553 170681594 - EcSMS35_3343 - SPFH domain-containing protein/band 7 family protein 3206 55.37 0 3420937..3422370 - 477 170683743 hldE EcSMS35_3344 - bifunctional protein HldE 3207 55.76 0 3422418..3425258 - 946 170680866 glnE EcSMS35_3345 - glutamate-ammonia ligase adenylyltransferase 3208 54.92 0 3425281..3426582 - 433 170682741 - EcSMS35_3346 - adenylate cyclase 3209 45.16 0 3426599..3426784 - 61 170681635 - EcSMS35_3347 - hypothetical protein 3210 52.33 0 3426824..3427444 + 206 170681115 - EcSMS35_3348 - hypothetical protein 3211 56.42 +1 3427508..3428746 + 412 170680641 cca EcSMS35_3349 - multifunctional CCA protein 3212 52.28 0 3428827..3429639 - 270 170680114 bacA EcSMS35_3350 - undecaprenyl-diphosphatase BacA 3213 51.22 0 3429739..3430107 - 122 170683805 folB EcSMS35_3351 - dihydroneopterin aldolase 3214 53.40 0 3430212..3430829 + 205 170683365 - EcSMS35_3352 - hypothetical protein 3215 49.95 0 3430842..3431774 - 310 170682678 ttdR EcSMS35_3353 - HTH-type transcriptional activator TtdR 3216 53.84 0 3431981..3432892 + 303 170683099 ddtA EcSMS35_3354 - L(+)-tartrate dehydratase, alpha subunit 3217 53.47 0 3432889..3433494 + 201 170683420 ttdB EcSMS35_3355 - L(+)-tartrate dehydratase, beta subunit 3218 55.33 0 3433542..3435005 + 487 170681701 - EcSMS35_3356 - anion transporter 3219 56.80 +1 3435048..3436061 - 337 170682206 gcp EcSMS35_3357 - O-sialoglycoprotein endopeptidase 3220 51.85 0 3436299..3436514 + 71 170680203 rpsU EcSMS35_3358 - ribosomal protein S21 3221 52.12 0 3436625..3438370 + 581 170680884 dnaG EcSMS35_3359 - DNA primase 3222 52.99 0 3438565..3440406 + 613 170683578 rpoD EcSMS35_3360 - RNA polymerase sigma factor RpoD 3223 51.42 0 3440465..3441028 + 187 170684265 - EcSMS35_3361 - hypothetical protein 3224 53.65 0 3441085..3441591 - 168 170682273 mug EcSMS35_3362 - G/U mismatch-specific DNA glycosylase 3225 56.99 +1 3441845..3442609 - 254 170682681 - EcSMS35_3364 - siderophore-interacting protein 3226 53.04 0 3442896..3443519 + 207 170680145 - EcSMS35_3365 - PadR family transcriptional regulator 3227 54.96 0 3443548..3445068 - 506 170682786 aer EcSMS35_3366 - aerotaxis receptor 3228 55.43 0 3445576..3446865 + 429 170681164 ygjG EcSMS35_3367 - putrescine aminotransferase 3229 51.35 0 3446907..3447239 - 110 170681948 - EcSMS35_3368 - putative methionyl-tRNA synthetase, beta subunit 3230 51.32 0 3447457..3448440 + 327 170682761 ebgR EcSMS35_3369 - HTH-type transcriptional regulator EbgR 3231 54.06 0 3448624..3451716 + 1030 170680616 ebgA EcSMS35_3370 - beta-galactosidase, subunit alpha 3232 45.33 0 3451713..3452162 + 149 170683783 ebgC EcSMS35_3371 - evolved beta-galactosidase, beta subunit 3233 49.51 0 3452225..3453658 + 477 170679908 - EcSMS35_3372 - amino acid permease family protein 3234 52.19 0 3453792..3454862 + 356 170680553 - EcSMS35_3373 - hypothetical protein 3235 54.12 0 3454879..3457230 + 783 170681156 - EcSMS35_3374 - hypothetical protein 3236 56.76 +1 3457401..3459419 + 672 170679814 fadH EcSMS35_3375 - 2,4-dienoyl-CoA reductase 3237 53.65 0 3459537..3460673 - 378 170684079 - EcSMS35_3376 - methyltransferase family protein 3238 52.18 0 3460758..3461261 + 167 170683556 - EcSMS35_3377 - hypothetical protein 3239 49.42 0 3461338..3462021 + 227 170682034 - EcSMS35_3378 - putative SanA protein 3240 52.18 0 3462100..3463086 + 328 170682416 - EcSMS35_3379 - oxidoreductase, NAD binding 3241 53.52 0 3463370..3464335 + 321 170681879 alx EcSMS35_3380 - protein Alx 3242 55.26 0 3464659..3465903 + 414 170681216 sstT EcSMS35_3381 - sodium:serine/threonine symporter 3243 50.91 0 3465907..3466458 - 183 170679962 - EcSMS35_3382 - putative inner membrane protein 3244 53.70 0 3466541..3468028 - 495 170681891 uxaA EcSMS35_3383 - altronate dehydratase 3245 53.72 0 3468043..3469455 - 470 170683343 uxaC EcSMS35_3384 - glucuronate isomerase 3246 54.43 0 3469938..3471236 + 432 170683899 exuT EcSMS35_3385 - hexuronate transporter 3247 47.95 0 3471312..3472406 - 364 170684132 - EcSMS35_3386 - pilus biogenesis initiator 3248 46.74 0 3472403..3475087 - 894 170682266 - EcSMS35_3387 - hypothetical protein 3249 46.31 0 3475178..3475678 - 166 170683018 - EcSMS35_3388 - CS1 type fimbrial major subunit 3250 39.61 -1 3475708..3476424 - 238 170681823 - EcSMS35_3389 - putative CFA/I fimbrial subunit A 3251 16.28 -2 3476504..3476632 - 42 170682044 - EcSMS35_3390 - hypothetical protein 3252 50.71 0 3476714..3477490 + 258 170680363 exuR EcSMS35_3391 - exu regulon transcriptional regulator 3253 37.61 -2 3477676..3477792 - 38 170681007 - EcSMS35_3392 - hypothetical protein 3254 50.83 0 3477835..3478497 + 220 170684106 - EcSMS35_3393 - putative inner membrane protein 3255 54.47 0 3478516..3478884 + 122 170680365 - EcSMS35_3394 - hypothetical protein 3256 48.24 0 3479031..3479399 + 122 170680273 - EcSMS35_3395 - hypothetical protein 3257 54.90 0 3479437..3479742 + 101 170681844 - EcSMS35_3396 - hypothetical protein 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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