version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3128 51.26 0 3343940..3345010 - 356 170683865 - EcSMS35_3265 - YjgP/YjgQ permease 3129 49.20 0 3345041..3345601 - 186 170682911 - EcSMS35_3266 - hypothetical protein 3130 45.94 0 3345613..3346437 - 274 170682555 - EcSMS35_3267 - hypothetical protein 3131 52.59 0 3346437..3347786 - 449 170681924 - EcSMS35_3268 - putative polysaccharide biosynthesis protein 3132 52.83 0 3347832..3348590 - 252 170681881 - EcSMS35_3269 - hypothetical protein 3133 50.21 0 3348622..3349320 - 232 170681235 - EcSMS35_3270 - putative lipoprotein 3134 48.05 0 3349509..3350201 + 230 170680580 - EcSMS35_3271 - hypothetical protein 3135 52.07 0 3350250..3351749 - 499 170680120 pitB EcSMS35_3272 - low-affinity inorganic phosphate transporter 2 3136 26.95 -2 3351809..3351949 + 46 170681899 - EcSMS35_3273 - hypothetical protein 3137 52.15 0 3352041..3353900 - 619 170681256 gsp EcSMS35_3274 - glutathionylspermidine amidase/glutathionylspermidine synthase 3138 54.79 0 3354105..3354971 + 288 170683583 - EcSMS35_3275 - glutathione S-transferase 3139 52.21 0 3355041..3355289 - 82 170683074 hybG EcSMS35_3276 - hydrogenase assembly chaperone HybG 3140 54.39 0 3355302..3355643 - 113 170681934 hypA1 EcSMS35_3277 - hydrogenase nickel insertion protein HypA 3141 54.81 0 3355636..3356124 - 162 170682513 hybE EcSMS35_3278 - hydrogenase-2 operon protein HybE 3142 55.15 0 3356117..3356611 - 164 170680954 hybD2 EcSMS35_3279 - hydrogenase 2 maturation peptidase 3143 53.52 0 3356611..3358314 - 567 170680167 hybC EcSMS35_3280 - hydrogenase-2, large subunit 3144 53.86 0 3358311..3359489 - 392 170680419 hybB EcSMS35_3281 - Ni/Fe-hydrogenase 2 b-type cytochrome subunit 3145 54.51 0 3359479..3360465 - 328 170679790 hybA EcSMS35_3282 - hydrogenase-2 electron transfer subunit 3146 54.33 0 3360468..3361586 - 372 170684089 hyb0 EcSMS35_3283 - hydrogenase-2 small chain 3147 37.21 -2 3361570..3361698 + 42 170683429 - EcSMS35_3284 - hypothetical protein 3148 46.18 0 3361775..3362062 - 95 170683677 - EcSMS35_3285 - hypothetical protein 3149 52.14 0 3362181..3363068 - 295 170684271 - EcSMS35_3286 - dienelactone hydrolase family protein 3150 52.55 0 3363225..3364265 + 346 170682381 - EcSMS35_3287 - aldo/keto reductase family oxidoreductase 3151 47.27 0 3364305..3364799 - 164 170682896 - EcSMS35_3288 - hypothetical protein 3152 54.24 0 3364990..3365874 + 294 170683631 - EcSMS35_3289 - short chain dehydrogenase/reductase family oxidoreductase 3153 49.53 0 3365912..3366337 - 141 170681759 exbD EcSMS35_3290 - TonB system transport protein ExbD 3154 53.20 0 3366344..3367078 - 244 170680008 exbB EcSMS35_3291 - TonB-system energizer ExbB 3155 51.85 0 3367330..3368517 + 395 170680690 metC EcSMS35_3292 - cystathionine beta-lyase 3156 50.45 0 3368657..3369316 + 219 170683149 - EcSMS35_3293 - hypothetical protein 3157 51.56 0 3369356..3370255 - 299 170683787 - EcSMS35_3294 - AraC family transcriptional regulator 3158 42.86 -1 3370252..3370398 - 48 170683937 - EcSMS35_3295 - hypothetical protein 3159 54.47 0 3370449..3371612 + 387 170682079 yqhD EcSMS35_3296 - alcohol dehydrogenase yqhD 3160 50.85 0 3371717..3372544 + 275 170682599 dkgA EcSMS35_3297 - 2,5-didehydrogluconate reductase A 3161 47.03 0 3372744..3373670 + 308 170680772 - EcSMS35_3298 - hypothetical protein 3162 48.84 0 3373721..3373978 + 85 170681297 - EcSMS35_3299 - putative lipoprotein 3163 54.37 0 3374020..3376239 - 739 170681820 - EcSMS35_3300 - radical SAM domain-containing protein 3164 44.27 -1 3376491..3377240 + 249 170684305 - EcSMS35_3301 - GntR family transcriptional regulator 3165 47.79 0 3377563..3379035 + 490 170683628 - EcSMS35_3302 - mannitol dehydrogenase 3166 47.10 0 3379032..3380048 + 338 170683214 - EcSMS35_3303 - zinc-binding dehydrogenase family protein 3167 47.38 0 3380059..3381069 + 336 170680163 - EcSMS35_3304 - malate/L-lactate dehydrogenase family protein 3168 41.87 -1 3381142..3382125 + 327 170683750 - EcSMS35_3305 - TRAP transporter solute receptor DctP family protein 3169 45.98 0 3382660..3383964 + 434 170682721 - EcSMS35_3307 - TRAP transporter, DctM subunit 3170 56.05 +1 3384035..3385447 - 470 170682156 sufI EcSMS35_3308 - protein SufI 3171 49.46 0 3385522..3386259 - 245 170681677 plsC EcSMS35_3309 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 3172 54.54 0 3386493..3388751 - 752 170681468 parC EcSMS35_3310 - DNA topoisomerase IV, A subunit 3173 52.55 0 3388889..3390496 - 535 170680624 - EcSMS35_3311 - solute-binding family 5 protein 3174 52.59 0 3390605..3391087 - 160 170679982 - EcSMS35_3312 - transcription activator effector binding domain/DNA gyrase inhibitor domain-containing protein 3175 50.38 0 3391140..3391532 - 130 170682123 - EcSMS35_3313 - hypothetical protein 3176 52.42 0 3391684..3392343 + 219 170683979 qseB EcSMS35_3314 - transcriptional regulatory protein QseB 3177 52.37 0 3392340..3393689 + 449 170682051 qseC EcSMS35_3315 - sensor histidine kinase QseC 3178 50.86 0 3393799..3394380 + 193 170682575 mdaB EcSMS35_3316 - modulator of drug activity B 3179 51.11 0 3394411..3394725 + 104 170681782 ygiN EcSMS35_3317 - quinol monooxygenase YgiN 3180 52.03 0 3394770..3395657 - 295 170681276 fitR EcSMS35_3318 - iron transport system regulatory protein FitR 3181 49.26 0 3395654..3396601 - 315 170681989 fitE EcSMS35_3319 - iron ABC transporter, periplasmic iron-binding protein FitE 3182 50.57 0 3396612..3397661 - 349 170683833 fitD EcSMS35_3320 - iron ABC transporter, permease protein FitD 3183 54.07 0 3397658..3398641 - 327 170683279 fitC EcSMS35_3321 - iron ABC transporter, permease protein FitC 3184 49.51 0 3398638..3399447 - 269 170680408 fitB EcSMS35_3322 - iron ABC transporter, ATP binding protein FitB 3185 23.33 -2 3399527..3399646 - 39 170679905 - EcSMS35_3323 - hypothetical protein 3186 47.81 0 3399821..3401962 + 713 170681849 fitA EcSMS35_3324 - TonB-dependent outer membrane ferric coprogen receptor FitA 3187 54.09 0 3402026..3403918 - 630 170679703 parE EcSMS35_3325 - DNA topoisomerase IV, B subunit 3188 53.78 0 3403947..3404528 - 193 170684219 yqiA EcSMS35_3326 - esterase YqiA 3189 56.76 +1 3404528..3405355 - 275 170683396 icc EcSMS35_3327 - protein icc 3190 48.23 0 3405380..3405802 - 140 170682587 - EcSMS35_3328 - hypothetical protein 3191 50.48 0 3405803..3406432 - 209 170683347 - EcSMS35_3329 - NUDIX family hydrolase 3192 51.01 0 3406637..3408118 + 493 170682545 tolC EcSMS35_3330 - outer membrane protein TolC 3193 56.40 +1 3408266..3408937 + 223 170681724 - EcSMS35_3331 - hypothetical protein 3194 50.90 0 3408943..3410103 + 386 170681476 - EcSMS35_3332 - glutathionylspermidine synthase family protein 3195 48.64 0 3410588..3412384 + 598 170680035 - EcSMS35_3333 - arylsulfate sulfotransferase 3196 44.84 -1 3412402..3413070 + 222 170681695 - EcSMS35_3334 - DsbA family thioredoxin 3197 48.40 0 3413100..3413756 + 218 170681279 - EcSMS35_3335 - DsbB family disulfide bond formation protein 3198 54.12 0 3413802..3414590 - 262 170680476 - EcSMS35_3336 - aromatic ring-opening dioxygenase 3199 52.97 0 3414733..3415506 + 257 170679914 zupT EcSMS35_3337 - zinc transporter ZupT 3200 41.54 -1 3415564..3415758 - 64 170679608 - EcSMS35_3338 - hypothetical protein 3201 52.75 0 3415996..3416649 - 217 170683968 ribB EcSMS35_3339 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 3202 47.50 0 3416963..3417322 + 119 170684291 - EcSMS35_3340 - hypothetical protein 3203 42.79 -1 3417357..3417557 - 66 170683608 glgS EcSMS35_3341 - glycogen synthesis protein GlgS 3204 42.22 -1 3417826..3418455 + 209 170682259 - EcSMS35_3342 - putative inner membrane protein 3205 50.90 0 3418482..3420143 + 553 170681594 - EcSMS35_3343 - SPFH domain-containing protein/band 7 family protein 3206 55.37 0 3420937..3422370 - 477 170683743 hldE EcSMS35_3344 - bifunctional protein HldE 3207 55.76 0 3422418..3425258 - 946 170680866 glnE EcSMS35_3345 - glutamate-ammonia ligase adenylyltransferase 3208 54.92 0 3425281..3426582 - 433 170682741 - EcSMS35_3346 - adenylate cyclase 3209 45.16 0 3426599..3426784 - 61 170681635 - EcSMS35_3347 - hypothetical protein 3210 52.33 0 3426824..3427444 + 206 170681115 - EcSMS35_3348 - hypothetical protein 3211 56.42 +1 3427508..3428746 + 412 170680641 cca EcSMS35_3349 - multifunctional CCA protein 3212 52.28 0 3428827..3429639 - 270 170680114 bacA EcSMS35_3350 - undecaprenyl-diphosphatase BacA 3213 51.22 0 3429739..3430107 - 122 170683805 folB EcSMS35_3351 - dihydroneopterin aldolase 3214 53.40 0 3430212..3430829 + 205 170683365 - EcSMS35_3352 - hypothetical protein 3215 49.95 0 3430842..3431774 - 310 170682678 ttdR EcSMS35_3353 - HTH-type transcriptional activator TtdR 3216 53.84 0 3431981..3432892 + 303 170683099 ddtA EcSMS35_3354 - L(+)-tartrate dehydratase, alpha subunit 3217 53.47 0 3432889..3433494 + 201 170683420 ttdB EcSMS35_3355 - L(+)-tartrate dehydratase, beta subunit 3218 55.33 0 3433542..3435005 + 487 170681701 - EcSMS35_3356 - anion transporter 3219 56.80 +1 3435048..3436061 - 337 170682206 gcp EcSMS35_3357 - O-sialoglycoprotein endopeptidase 3220 51.85 0 3436299..3436514 + 71 170680203 rpsU EcSMS35_3358 - ribosomal protein S21 3221 52.12 0 3436625..3438370 + 581 170680884 dnaG EcSMS35_3359 - DNA primase 3222 52.99 0 3438565..3440406 + 613 170683578 rpoD EcSMS35_3360 - RNA polymerase sigma factor RpoD 3223 51.42 0 3440465..3441028 + 187 170684265 - EcSMS35_3361 - hypothetical protein 3224 53.65 0 3441085..3441591 - 168 170682273 mug EcSMS35_3362 - G/U mismatch-specific DNA glycosylase 3225 56.99 +1 3441845..3442609 - 254 170682681 - EcSMS35_3364 - siderophore-interacting protein 3226 53.04 0 3442896..3443519 + 207 170680145 - EcSMS35_3365 - PadR family transcriptional regulator 3227 54.96 0 3443548..3445068 - 506 170682786 aer EcSMS35_3366 - aerotaxis receptor 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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