version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3086 50.04 0 3291344..3292492 + 382 170680931 kpsE EcSMS35_3220 - polysialic acid capsule export inner-membrane protein KpsE 3087 52.06 0 3292516..3294192 + 558 170681559 kpsD EcSMS35_3221 - polysialic acid capsule transport protein KpsD 3088 54.52 0 3294202..3294942 + 246 170680703 kpsU EcSMS35_3222 - 3-deoxy-D-manno-octulosonate cytidylyltransferase KpsU 3089 51.23 0 3294939..3296972 + 677 170680172 kpsC EcSMS35_3223 - polysialic acid capsule polysaccharide export protein KpsC 3090 45.36 0 3296995..3298200 + 401 170680977 kpsS EcSMS35_3224 - polysialic acid capsule biosynthesis protein KpsS 3091 26.67 -2 3299836..3301065 - 409 170681953 neuS EcSMS35_3228 - polysialic acid capsule biosynthesis polysialyltransferase NeuS 3092 26.62 -2 3301055..3302230 - 391 170682958 neuE EcSMS35_3229 - polysialic acid capsule biosynthesis protein NeuE 3093 32.14 -2 3302196..3303371 - 391 170683594 neuC EcSMS35_3230 - polysialic acid capsule biosynthesis protein NeuC 3094 30.95 -2 3303368..3304624 - 418 170683470 neuA EcSMS35_3231 - polysialic acid capsule biosynthesis N-acylneuraminate cytidylyltransferase NeuA 3095 32.37 -2 3304624..3305664 - 346 170684121 neuB EcSMS35_3232 - polysialic acid capsule biosynthesis sialic acid synthase NeuB 3096 31.09 -2 3305661..3306284 - 207 170679748 neuD EcSMS35_3233 - polysialic acid capsule biosynthesis protein NeuD 3097 34.85 -2 3306334..3306993 - 219 170680342 kpsT EcSMS35_3234 - polysialic acid capsule biosynthesis transport protein KpsT 3098 43.76 -1 3306990..3307766 - 258 170681020 kpsM EcSMS35_3235 - polysialic acid capsule biosynthesis transport protein KpsM 3099 48.08 0 3308800..3309999 - 399 170682393 - EcSMS35_3236 - IS200 transposase orfB 3100 46.91 0 3310058..3310462 + 134 170683194 - EcSMS35_3237 - IS200 transposase orfA 3101 53.45 0 3310702..3311238 - 178 170682883 gspM EcSMS35_3238 - general secretion pathway protein GspM 3102 56.57 +1 3311240..3312418 - 392 170683391 gspL EcSMS35_3239 - general secretion pathway protein GspL 3103 55.52 0 3312415..3313392 - 325 170684190 gspK EcSMS35_3240 - general secretion pathway protein GspK 3104 56.27 +1 3313392..3313997 - 201 170679969 gspJ EcSMS35_3241 - general secretion pathway protein GspJ 3105 55.38 0 3313994..3314365 - 123 170679735 gspI EcSMS35_3242 - general secretion pathway protein GspI 3106 54.26 0 3314362..3314925 - 187 170681274 gspH EcSMS35_3243 - general secretion pathway protein GspH 3107 53.07 0 3314929..3315384 - 151 170681001 gspG EcSMS35_3244 - general secretion pathway protein GspG 3108 59.15 +1 3315401..3316624 - 407 170681469 gspF EcSMS35_3245 - general secretion pathway protein GspF 3109 58.30 +1 3316624..3318117 - 497 170683342 gspE EcSMS35_3246 - general secretory pathway protein GspE 3110 54.73 0 3318117..3320177 - 686 170681179 gspD EcSMS35_3247 - general secretion pathway protein GspD 3111 50.52 0 3320207..3321166 - 319 170681120 gspC EcSMS35_3248 - general secretion pathway protein GspC 3112 44.04 -1 3321184..3321594 - 136 170680581 - EcSMS35_3249 - putative lipoprotein 3113 52.22 0 3321660..3322469 - 269 170680076 pppA EcSMS35_3250 - leader peptidase PppA 3114 51.96 0 3322667..3327223 - 1518 170683116 - EcSMS35_3251 - hypothetical protein 3115 53.48 0 3327708..3329390 - 560 170682106 glcA EcSMS35_3252 - glycolate permease GlcA 3116 53.73 0 3329745..3331916 - 723 170681765 glcB EcSMS35_3253 - malate synthase G 3117 54.81 0 3331938..3332342 - 134 170681117 - EcSMS35_3254 - GlcG protein 3118 55.96 0 3332347..3333570 - 407 170680842 glcF EcSMS35_3255 - glycolate oxidase, iron-sulfur subunit GlcF 3119 57.36 +1 3333581..3334633 - 350 170682017 glcE EcSMS35_3256 - glycolate oxidase, subunit GlcE 3120 56.87 +1 3334633..3336123 - 496 170682557 glcD EcSMS35_3257 - glycolate oxidase, subunit GlcD 3121 54.86 0 3336383..3337153 + 256 170683351 glcC EcSMS35_3258 - Glc operon transcriptional activator 3122 49.43 0 3337229..3338371 - 380 170683858 - EcSMS35_3259 - hypothetical protein 3123 53.01 0 3338775..3340466 + 563 170684019 - EcSMS35_3260 - AMP-binding enzyme 3124 54.32 0 3340463..3341377 + 304 170680110 - EcSMS35_3261 - NAD dependent epimerase/dehydratase family protein 3125 40.56 -1 3341409..3341657 + 82 170680622 - EcSMS35_3262 - putative acyl carrier protein 3126 51.66 0 3341657..3342829 + 390 170680202 - EcSMS35_3263 - putative serine palmitoyltransferase 3127 51.76 0 3342864..3343943 - 359 170681358 - EcSMS35_3264 - YjgP/YjgQ permease 3128 51.26 0 3343940..3345010 - 356 170683865 - EcSMS35_3265 - YjgP/YjgQ permease 3129 49.20 0 3345041..3345601 - 186 170682911 - EcSMS35_3266 - hypothetical protein 3130 45.94 0 3345613..3346437 - 274 170682555 - EcSMS35_3267 - hypothetical protein 3131 52.59 0 3346437..3347786 - 449 170681924 - EcSMS35_3268 - putative polysaccharide biosynthesis protein 3132 52.83 0 3347832..3348590 - 252 170681881 - EcSMS35_3269 - hypothetical protein 3133 50.21 0 3348622..3349320 - 232 170681235 - EcSMS35_3270 - putative lipoprotein 3134 48.05 0 3349509..3350201 + 230 170680580 - EcSMS35_3271 - hypothetical protein 3135 52.07 0 3350250..3351749 - 499 170680120 pitB EcSMS35_3272 - low-affinity inorganic phosphate transporter 2 3136 26.95 -2 3351809..3351949 + 46 170681899 - EcSMS35_3273 - hypothetical protein 3137 52.15 0 3352041..3353900 - 619 170681256 gsp EcSMS35_3274 - glutathionylspermidine amidase/glutathionylspermidine synthase 3138 54.79 0 3354105..3354971 + 288 170683583 - EcSMS35_3275 - glutathione S-transferase 3139 52.21 0 3355041..3355289 - 82 170683074 hybG EcSMS35_3276 - hydrogenase assembly chaperone HybG 3140 54.39 0 3355302..3355643 - 113 170681934 hypA1 EcSMS35_3277 - hydrogenase nickel insertion protein HypA 3141 54.81 0 3355636..3356124 - 162 170682513 hybE EcSMS35_3278 - hydrogenase-2 operon protein HybE 3142 55.15 0 3356117..3356611 - 164 170680954 hybD2 EcSMS35_3279 - hydrogenase 2 maturation peptidase 3143 53.52 0 3356611..3358314 - 567 170680167 hybC EcSMS35_3280 - hydrogenase-2, large subunit 3144 53.86 0 3358311..3359489 - 392 170680419 hybB EcSMS35_3281 - Ni/Fe-hydrogenase 2 b-type cytochrome subunit 3145 54.51 0 3359479..3360465 - 328 170679790 hybA EcSMS35_3282 - hydrogenase-2 electron transfer subunit 3146 54.33 0 3360468..3361586 - 372 170684089 hyb0 EcSMS35_3283 - hydrogenase-2 small chain 3147 37.21 -2 3361570..3361698 + 42 170683429 - EcSMS35_3284 - hypothetical protein 3148 46.18 0 3361775..3362062 - 95 170683677 - EcSMS35_3285 - hypothetical protein 3149 52.14 0 3362181..3363068 - 295 170684271 - EcSMS35_3286 - dienelactone hydrolase family protein 3150 52.55 0 3363225..3364265 + 346 170682381 - EcSMS35_3287 - aldo/keto reductase family oxidoreductase 3151 47.27 0 3364305..3364799 - 164 170682896 - EcSMS35_3288 - hypothetical protein 3152 54.24 0 3364990..3365874 + 294 170683631 - EcSMS35_3289 - short chain dehydrogenase/reductase family oxidoreductase 3153 49.53 0 3365912..3366337 - 141 170681759 exbD EcSMS35_3290 - TonB system transport protein ExbD 3154 53.20 0 3366344..3367078 - 244 170680008 exbB EcSMS35_3291 - TonB-system energizer ExbB 3155 51.85 0 3367330..3368517 + 395 170680690 metC EcSMS35_3292 - cystathionine beta-lyase 3156 50.45 0 3368657..3369316 + 219 170683149 - EcSMS35_3293 - hypothetical protein 3157 51.56 0 3369356..3370255 - 299 170683787 - EcSMS35_3294 - AraC family transcriptional regulator 3158 42.86 -1 3370252..3370398 - 48 170683937 - EcSMS35_3295 - hypothetical protein 3159 54.47 0 3370449..3371612 + 387 170682079 yqhD EcSMS35_3296 - alcohol dehydrogenase yqhD 3160 50.85 0 3371717..3372544 + 275 170682599 dkgA EcSMS35_3297 - 2,5-didehydrogluconate reductase A 3161 47.03 0 3372744..3373670 + 308 170680772 - EcSMS35_3298 - hypothetical protein 3162 48.84 0 3373721..3373978 + 85 170681297 - EcSMS35_3299 - putative lipoprotein 3163 54.37 0 3374020..3376239 - 739 170681820 - EcSMS35_3300 - radical SAM domain-containing protein 3164 44.27 -1 3376491..3377240 + 249 170684305 - EcSMS35_3301 - GntR family transcriptional regulator 3165 47.79 0 3377563..3379035 + 490 170683628 - EcSMS35_3302 - mannitol dehydrogenase 3166 47.10 0 3379032..3380048 + 338 170683214 - EcSMS35_3303 - zinc-binding dehydrogenase family protein 3167 47.38 0 3380059..3381069 + 336 170680163 - EcSMS35_3304 - malate/L-lactate dehydrogenase family protein 3168 41.87 -1 3381142..3382125 + 327 170683750 - EcSMS35_3305 - TRAP transporter solute receptor DctP family protein 3169 45.98 0 3382660..3383964 + 434 170682721 - EcSMS35_3307 - TRAP transporter, DctM subunit 3170 56.05 +1 3384035..3385447 - 470 170682156 sufI EcSMS35_3308 - protein SufI 3171 49.46 0 3385522..3386259 - 245 170681677 plsC EcSMS35_3309 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 3172 54.54 0 3386493..3388751 - 752 170681468 parC EcSMS35_3310 - DNA topoisomerase IV, A subunit 3173 52.55 0 3388889..3390496 - 535 170680624 - EcSMS35_3311 - solute-binding family 5 protein 3174 52.59 0 3390605..3391087 - 160 170679982 - EcSMS35_3312 - transcription activator effector binding domain/DNA gyrase inhibitor domain-containing protein 3175 50.38 0 3391140..3391532 - 130 170682123 - EcSMS35_3313 - hypothetical protein 3176 52.42 0 3391684..3392343 + 219 170683979 qseB EcSMS35_3314 - transcriptional regulatory protein QseB 3177 52.37 0 3392340..3393689 + 449 170682051 qseC EcSMS35_3315 - sensor histidine kinase QseC 3178 50.86 0 3393799..3394380 + 193 170682575 mdaB EcSMS35_3316 - modulator of drug activity B 3179 51.11 0 3394411..3394725 + 104 170681782 ygiN EcSMS35_3317 - quinol monooxygenase YgiN 3180 52.03 0 3394770..3395657 - 295 170681276 fitR EcSMS35_3318 - iron transport system regulatory protein FitR 3181 49.26 0 3395654..3396601 - 315 170681989 fitE EcSMS35_3319 - iron ABC transporter, periplasmic iron-binding protein FitE 3182 50.57 0 3396612..3397661 - 349 170683833 fitD EcSMS35_3320 - iron ABC transporter, permease protein FitD 3183 54.07 0 3397658..3398641 - 327 170683279 fitC EcSMS35_3321 - iron ABC transporter, permease protein FitC 3184 49.51 0 3398638..3399447 - 269 170680408 fitB EcSMS35_3322 - iron ABC transporter, ATP binding protein FitB 3185 23.33 -2 3399527..3399646 - 39 170679905 - EcSMS35_3323 - hypothetical protein 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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