version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2940 54.52 0 3127351..3128445 - 364 170683423 gcvT EcSMS35_3037 - glycine cleavage system T protein 2941 21.71 -2 3128621..3128749 - 42 170683999 - EcSMS35_3038 - hypothetical protein 2942 21.93 -2 3128706..3128819 + 37 170682333 - EcSMS35_3039 - hypothetical protein 2943 55.20 0 3128893..3130095 - 400 170683096 - EcSMS35_3040 - UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 2944 60.22 +1 3130118..3131296 - 392 170680909 ubiH EcSMS35_3041 - 2-octaprenyl-6-methoxyphenol hydroxylase 2945 53.39 0 3131293..3132618 - 441 170680916 pepP EcSMS35_3042 - Xaa-Pro aminopeptidase 2946 52.31 0 3132644..3133228 - 194 170681497 - EcSMS35_3043 - YecA family protein 2947 46.97 0 3133390..3133719 + 109 170681951 - EcSMS35_3044 - hypothetical protein 2948 51.24 0 3133965..3134567 + 200 170683068 - EcSMS35_3045 - 5,10-methenyltetrahydrofolate synthetase 2949 52.64 0 3134956..3136188 - 410 170683573 serA EcSMS35_3046 - phosphoglycerate dehydrogenase 2950 53.03 0 3136444..3137103 - 219 170684222 rpiA EcSMS35_3047 - ribose 5-phosphate isomerase A 2951 57.53 +1 3137159..3138055 - 298 170680003 - EcSMS35_3048 - LysR family transcriptional regulator 2952 48.25 0 3138156..3138785 + 209 170680497 - EcSMS35_3049 - azoreductase type 1 family protein 2953 39.08 -2 3138802..3139062 + 86 170680314 - EcSMS35_3050 - hypothetical protein 2954 44.49 -1 3139124..3140449 + 441 170680814 - EcSMS35_3051 - ferric reductase/oxidoreductase, FAD/NAD binding 2955 54.36 0 3140520..3141413 + 297 170684145 iciA EcSMS35_3052 - chromosome initiation inhibitor 2956 54.55 0 3141616..3143760 + 714 170683251 msm EcSMS35_3053 - methylmalonyl-CoA mutase 2957 53.61 0 3143753..3144748 + 331 170683019 - EcSMS35_3054 - LAO/AO transport system ATPase 2958 49.49 0 3144759..3145544 + 261 170682071 - EcSMS35_3055 - methylmalonyl-CoA decarboxylase 2959 53.08 0 3145568..3147046 + 492 170681655 - EcSMS35_3057 - acetyl-CoA hydrolase/transferase 2960 44.82 -1 3147043..3147939 - 298 170681536 - EcSMS35_3056 - LysR family transcriptional regulator 2961 52.90 0 3148107..3148847 - 246 170681135 - EcSMS35_3058 - hypothetical protein 2962 50.94 0 3148940..3149575 - 211 170680655 argO EcSMS35_3059 - arginine exporter protein ArgO 2963 44.73 -1 3149691..3150734 + 347 170679959 - EcSMS35_3060 - solute-binding family 7 protein 2964 49.77 0 3150776..3151651 - 291 170682680 mscS EcSMS35_3061 - small-conductance mechanosensitive channel 2965 51.11 0 3152009..3153088 - 359 170681392 fbaA EcSMS35_3062 - fructose-bisphosphate aldolase 2966 52.23 0 3153302..3154465 - 387 170681168 pgk EcSMS35_3063 - phosphoglycerate kinase 2967 51.18 0 3154515..3155534 - 339 170679808 epd EcSMS35_3064 - D-erythrose-4-phosphate dehydrogenase 2968 55.09 0 3155906..3156337 + 143 170680119 - EcSMS35_3065 - hypothetical protein 2969 57.17 +1 3156360..3156938 + 192 170684110 - EcSMS35_3066 - hypothetical protein 2970 56.64 +1 3156939..3157646 + 235 170683038 - EcSMS35_3067 - hypothetical protein 2971 53.95 0 3157628..3158311 + 227 170682493 - EcSMS35_3068 - ABC transporter, ATP-binding protein 2972 53.54 0 3158305..3158982 + 225 170680805 - EcSMS35_3070 - ABC transporter, ATP-binding protein 2973 52.24 0 3158954..3159667 - 237 170681606 - EcSMS35_3069 - hypothetical protein 2974 49.02 0 3159664..3160173 - 169 170679690 - EcSMS35_3071 - mannitol operon repressor 2975 56.31 +1 3160195..3161160 - 321 170680034 glpX2 EcSMS35_3072 - fructose-1,6-bisphosphatase, class II 2976 51.41 0 3161157..3162434 - 425 170683729 sorE EcSMS35_3073 - L-sorbose 1-phosphate reductase 2977 42.34 -1 3163865..3164308 - 147 170680302 cmtB EcSMS35_3075 - mannitol-specific cryptic phosphotransferase enzyme IIA component 2978 47.96 0 3164685..3165593 + 302 170680516 - EcSMS35_3076 - SPFH domain-containing protein/band 7 family protein 2979 56.33 +1 3165813..3167804 - 663 170681853 tktA EcSMS35_3077 - transketolase 2980 52.31 0 3168082..3168840 + 252 170682269 - EcSMS35_3078 - M48B family peptidase 2981 55.27 0 3168888..3169808 - 306 170682959 speB EcSMS35_3079 - agmatinase 2982 48.63 0 3169944..3170675 - 243 170683310 - EcSMS35_3080 - putative lipoprotein 2983 54.66 0 3170821..3172719 - 632 170679666 speA EcSMS35_3081 - arginine decarboxylase 2984 40.91 -1 3172806..3172937 - 43 170681127 - EcSMS35_3082 - hypothetical protein 2985 42.86 -1 3173285..3173536 - 83 170680030 - EcSMS35_3083 - hypothetical protein 2986 53.07 0 3173592..3174746 + 384 170681721 metK EcSMS35_3084 - S-adenosylmethionine synthetase 2987 53.41 0 3175182..3176576 + 464 170681091 galP EcSMS35_3085 - galactose-proton symporter 2988 56.22 +1 3176653..3177150 + 165 170682825 sprT EcSMS35_3086 - protein SprT 2989 54.24 0 3177245..3177952 + 235 170682683 endA EcSMS35_3087 - endonuclease I 2990 53.55 0 3178032..3178763 + 243 170682172 rsmE EcSMS35_3088 - 16S rRNA methyltransferase RsmE 2991 53.52 0 3178776..3179726 + 316 170683849 gshB EcSMS35_3089 - glutathione synthase 2992 51.60 0 3179835..3180398 + 187 170680665 - EcSMS35_3090 - hypothetical protein 2993 53.24 0 3180398..3180814 + 138 170681746 - EcSMS35_3091 - putative Holliday junction resolvase 2994 54.97 0 3180993..3182018 - 341 170680393 - EcSMS35_3092 - twitching motility family protein 2995 51.49 0 3181991..3182695 + 234 170683383 - EcSMS35_3093 - alanine racemase 2996 51.50 0 3182713..3183279 + 188 170683909 - EcSMS35_3094 - YGGT family protein 2997 47.77 0 3183276..3183566 + 96 170681809 - EcSMS35_3095 - hypothetical protein 2998 55.22 0 3183574..3184167 + 197 170679994 rdgB EcSMS35_3096 - RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 2999 52.15 0 3184160..3185296 + 378 170681312 - EcSMS35_3097 - putative oxygen-independent coproporphyrinogen III oxidase 3000 43.95 -1 3185365..3186372 - 335 170681863 - EcSMS35_3098 - hypothetical protein 3001 53.10 0 3186489..3187535 - 348 170682068 ansB_1 EcSMS35_3099 - L-asparaginase 2 3002 52.64 0 3187711..3188430 - 239 170682570 - EcSMS35_3100 - hypothetical protein 3003 50.35 0 3188451..3188591 - 46 170679978 - EcSMS35_3101 - hypothetical protein 3004 48.62 0 3188614..3188940 - 108 170682631 - EcSMS35_3102 - hypothetical protein 3005 53.19 0 3188940..3189659 - 239 170682679 trmB EcSMS35_3103 - tRNA (guanine-N(7)-)-methyltransferase 3006 54.70 0 3189820..3190872 + 350 170682894 mutY EcSMS35_3104 - A/G-specific adenine glycosylase 3007 47.46 0 3190900..3191175 + 91 170683828 - EcSMS35_3105 - hypothetical protein 3008 51.39 0 3191239..3192318 + 359 170683301 mltC EcSMS35_3106 - membrane-bound lytic murein transglycosylase C 3009 42.22 -1 3192324..3192458 - 44 170680733 - EcSMS35_3107 - hypothetical protein 3010 50.84 0 3192520..3193776 + 418 170679662 nupG EcSMS35_3108 - nucleoside permease NupG 3011 52.76 0 3193823..3195958 - 711 170681617 speC EcSMS35_3109 - ornithine decarboxylase, constitutive 3012 49.28 0 3197411..3198595 + 394 170679820 - EcSMS35_3112 - site-specific recombinase, phage integrase family protein 3013 48.47 0 3198745..3199755 + 336 170682779 rafR EcSMS35_3113 - HTH-type transcriptional regulator RafR 3014 51.15 0 3199851..3201977 + 708 170682126 rafA EcSMS35_3114 - alpha-galactosidase 3015 46.32 0 3202040..3203317 + 425 170683854 rafB EcSMS35_3115 - raffinose permease 3016 50.66 0 3203317..3204747 + 476 170683153 rafD EcSMS35_3116 - raffinose invertase 3017 39.50 -2 3204942..3206336 + 464 170680709 rafY1 EcSMS35_3117 - glycoporin RafY 3018 53.60 0 3206914..3207357 - 147 170683732 - EcSMS35_3118 - IS2 transposase orfB 3019 52.90 0 3207276..3207551 - 91 170683540 - EcSMS35_3119 - IS1 transposase orfA 3020 37.33 -2 3207580..3207804 - 74 170680853 - EcSMS35_3120 - hypothetical protein 3021 53.10 0 3210660..3211337 + 225 170682342 - EcSMS35_3124 - IS66 family transposase orfA 3022 59.44 +1 3211418..3211597 - 59 170681419 - EcSMS35_3125 - hypothetical protein 3023 56.44 +1 3211704..3213278 + 524 170683550 - EcSMS35_3126 - IS66 family transposase orfB 3024 44.73 -1 3213444..3213680 - 78 170680348 - EcSMS35_3127 - hypothetical protein 3025 51.68 0 3214175..3216262 - 695 170684240 - EcSMS35_3128 - putative exogenous TonB-dependent siderophore receptor R4 3026 38.25 -2 3216575..3216859 + 94 170683144 - EcSMS35_3129 - hypothetical protein 3027 43.50 -1 3217235..3217588 + 117 170683670 - EcSMS35_3130 - hypothetical protein 3028 51.94 0 3218016..3219047 - 343 170681851 - EcSMS35_3131 - IS630 transposase 3029 44.07 -1 3219190..3219366 - 58 170681183 - EcSMS35_3132 - hypothetical protein 3030 52.42 0 3223179..3223529 - 116 170680285 - EcSMS35_3136 - IS66 family transposase orfB 3031 49.06 0 3223526..3223951 - 141 170681295 - EcSMS35_3137 - IS66 family transposase orfA 3032 51.67 0 3227446..3228705 - 419 170683287 amiC2 EcSMS35_3140 - N-acetylmuramoyl-L-alanine amidase AmiC 3033 46.24 0 3229572..3229997 - 141 170682595 - EcSMS35_3141 - hypothetical protein 3034 54.57 0 3230570..3231313 - 247 170681926 - EcSMS35_3143 - IS21 transposase orfB 3035 52.86 0 3231313..3232485 - 390 170680910 - EcSMS35_3144 - IS2 transposase orfA 3036 51.01 0 3236889..3237533 - 214 170683482 ibrB EcSMS35_3152 - immunoglobulin-binding regulator B 3037 49.96 0 3237518..3238744 - 408 170679850 ibrA EcSMS35_3153 - immunoglobulin-binding regulator A 3038 60.00 +1 3240031..3240180 - 49 170682946 - EcSMS35_3155 - hypothetical protein 3039 52.33 0 3240501..3240800 + 99 170681351 - EcSMS35_3156 - ISEc16 transposase orfA 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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