version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2908 51.65 0 3087745..3088956 + 403 170684131 - EcSMS35_3005 - M20/DapE family protein YgeY 2909 52.58 0 3088997..3090394 + 465 170682443 hyuA EcSMS35_3006 - dihydropyrimidinase 2910 49.52 0 3090442..3091374 + 310 170680720 - EcSMS35_3007 - carbamate kinase arcC-like protein 2911 52.58 0 3091415..3093040 - 541 170680222 - EcSMS35_3008 - putative xanthine dehydrogenase accessory factor 2912 50.19 0 3093088..3093858 - 256 170680868 - EcSMS35_3009 - hypothetical protein 2913 42.49 -1 3093961..3094539 + 192 170681481 - EcSMS35_3010 - hypothetical protein 2914 52.40 0 3094861..3097959 + 1032 170681388 - EcSMS35_3011 - pyridine nucleotide-disulfide family oxidoreductase 2915 52.52 0 3097962..3099290 + 442 170680729 ssnA EcSMS35_3012 - amidohydrolase family protein SsnA 2916 54.23 0 3099341..3100120 + 259 170682210 - EcSMS35_3013 - putative selenate reductase, FAD-binding subunit 2917 53.05 0 3100117..3102987 + 956 170683442 - EcSMS35_3014 - putative hypoxanthine oxidase XdhD 2918 49.18 0 3103152..3104552 + 466 170681803 - EcSMS35_3015 - xanthine/uracil permease family protein 2919 48.75 0 3104570..3105886 + 438 170682427 guaD EcSMS35_3016 - guanine deaminase 2920 52.85 0 3105922..3107289 + 455 170680723 - EcSMS35_3017 - sulfate permease family inorganic anion transporter 2921 55.21 0 3107325..3107813 - 162 170680835 - EcSMS35_3018 - 4Fe-4S binding protein 2922 53.13 0 3107813..3109747 - 644 170683856 aegA2 EcSMS35_3019 - protein aegA 2923 48.80 0 3110039..3111616 + 525 170679688 - EcSMS35_3020 - putative xanthine permease 2924 35.71 -2 3111618..3111743 + 41 170683489 - EcSMS35_3021 - hypothetical protein 2925 49.91 0 3111866..3112414 + 182 170684006 idi EcSMS35_3022 - isopentenyl-diphosphate delta-isomerase, type 1 2926 53.10 0 3112457..3113974 - 505 170682698 lysS EcSMS35_3023 - lysyl-tRNA synthetase LysS 2927 53.23 0 3113984..3115082 - 365 170682178 prfB EcSMS35_3024 - peptide chain release factor 2 2928 56.98 +1 3115173..3116906 - 577 170683389 recJ EcSMS35_3025 - single-stranded-DNA-specific exonuclease RecJ 2929 48.24 0 3116912..3117622 - 236 170682633 dsbC EcSMS35_3026 - thiol:disulfide interchange protein DsbC 2930 53.40 0 3117647..3118543 - 298 170681991 xerD EcSMS35_3027 - tyrosine recombinase XerD 2931 51.72 0 3118655..3119176 + 173 170683925 fldB EcSMS35_3028 - flavodoxin 2932 54.66 0 3119216..3119623 - 135 170683382 - EcSMS35_3029 - hypothetical protein 2933 49.44 0 3119604..3119870 - 88 170679885 - EcSMS35_3030 - TPR repeat-containing protein 2934 54.43 0 3120113..3121093 + 326 170683930 ygfZ EcSMS35_3031 - tRNA-modifying protein ygfZ 2935 52.58 0 3121170..3121829 - 219 170682502 - EcSMS35_3032 - hemolysin III family channel protein 2936 45.83 0 3121993..3122304 - 103 170683063 - EcSMS35_3033 - hypothetical protein 2937 50.76 0 3122343..3123782 + 479 170681438 bglA EcSMS35_3034 - 6-phospho-beta-glucosidase BglA 2938 55.88 0 3123946..3126819 - 957 170679779 gcvP EcSMS35_3035 - glycine dehydrogenase (decarboxylating) 2939 52.82 0 3126938..3127327 - 129 170680437 gcvH EcSMS35_3036 - glycine cleavage system H protein 2940 54.52 0 3127351..3128445 - 364 170683423 gcvT EcSMS35_3037 - glycine cleavage system T protein 2941 21.71 -2 3128621..3128749 - 42 170683999 - EcSMS35_3038 - hypothetical protein 2942 21.93 -2 3128706..3128819 + 37 170682333 - EcSMS35_3039 - hypothetical protein 2943 55.20 0 3128893..3130095 - 400 170683096 - EcSMS35_3040 - UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 2944 60.22 +1 3130118..3131296 - 392 170680909 ubiH EcSMS35_3041 - 2-octaprenyl-6-methoxyphenol hydroxylase 2945 53.39 0 3131293..3132618 - 441 170680916 pepP EcSMS35_3042 - Xaa-Pro aminopeptidase 2946 52.31 0 3132644..3133228 - 194 170681497 - EcSMS35_3043 - YecA family protein 2947 46.97 0 3133390..3133719 + 109 170681951 - EcSMS35_3044 - hypothetical protein 2948 51.24 0 3133965..3134567 + 200 170683068 - EcSMS35_3045 - 5,10-methenyltetrahydrofolate synthetase 2949 52.64 0 3134956..3136188 - 410 170683573 serA EcSMS35_3046 - phosphoglycerate dehydrogenase 2950 53.03 0 3136444..3137103 - 219 170684222 rpiA EcSMS35_3047 - ribose 5-phosphate isomerase A 2951 57.53 +1 3137159..3138055 - 298 170680003 - EcSMS35_3048 - LysR family transcriptional regulator 2952 48.25 0 3138156..3138785 + 209 170680497 - EcSMS35_3049 - azoreductase type 1 family protein 2953 39.08 -2 3138802..3139062 + 86 170680314 - EcSMS35_3050 - hypothetical protein 2954 44.49 -1 3139124..3140449 + 441 170680814 - EcSMS35_3051 - ferric reductase/oxidoreductase, FAD/NAD binding 2955 54.36 0 3140520..3141413 + 297 170684145 iciA EcSMS35_3052 - chromosome initiation inhibitor 2956 54.55 0 3141616..3143760 + 714 170683251 msm EcSMS35_3053 - methylmalonyl-CoA mutase 2957 53.61 0 3143753..3144748 + 331 170683019 - EcSMS35_3054 - LAO/AO transport system ATPase 2958 49.49 0 3144759..3145544 + 261 170682071 - EcSMS35_3055 - methylmalonyl-CoA decarboxylase 2959 53.08 0 3145568..3147046 + 492 170681655 - EcSMS35_3057 - acetyl-CoA hydrolase/transferase 2960 44.82 -1 3147043..3147939 - 298 170681536 - EcSMS35_3056 - LysR family transcriptional regulator 2961 52.90 0 3148107..3148847 - 246 170681135 - EcSMS35_3058 - hypothetical protein 2962 50.94 0 3148940..3149575 - 211 170680655 argO EcSMS35_3059 - arginine exporter protein ArgO 2963 44.73 -1 3149691..3150734 + 347 170679959 - EcSMS35_3060 - solute-binding family 7 protein 2964 49.77 0 3150776..3151651 - 291 170682680 mscS EcSMS35_3061 - small-conductance mechanosensitive channel 2965 51.11 0 3152009..3153088 - 359 170681392 fbaA EcSMS35_3062 - fructose-bisphosphate aldolase 2966 52.23 0 3153302..3154465 - 387 170681168 pgk EcSMS35_3063 - phosphoglycerate kinase 2967 51.18 0 3154515..3155534 - 339 170679808 epd EcSMS35_3064 - D-erythrose-4-phosphate dehydrogenase 2968 55.09 0 3155906..3156337 + 143 170680119 - EcSMS35_3065 - hypothetical protein 2969 57.17 +1 3156360..3156938 + 192 170684110 - EcSMS35_3066 - hypothetical protein 2970 56.64 +1 3156939..3157646 + 235 170683038 - EcSMS35_3067 - hypothetical protein 2971 53.95 0 3157628..3158311 + 227 170682493 - EcSMS35_3068 - ABC transporter, ATP-binding protein 2972 53.54 0 3158305..3158982 + 225 170680805 - EcSMS35_3070 - ABC transporter, ATP-binding protein 2973 52.24 0 3158954..3159667 - 237 170681606 - EcSMS35_3069 - hypothetical protein 2974 49.02 0 3159664..3160173 - 169 170679690 - EcSMS35_3071 - mannitol operon repressor 2975 56.31 +1 3160195..3161160 - 321 170680034 glpX2 EcSMS35_3072 - fructose-1,6-bisphosphatase, class II 2976 51.41 0 3161157..3162434 - 425 170683729 sorE EcSMS35_3073 - L-sorbose 1-phosphate reductase 2977 42.34 -1 3163865..3164308 - 147 170680302 cmtB EcSMS35_3075 - mannitol-specific cryptic phosphotransferase enzyme IIA component 2978 47.96 0 3164685..3165593 + 302 170680516 - EcSMS35_3076 - SPFH domain-containing protein/band 7 family protein 2979 56.33 +1 3165813..3167804 - 663 170681853 tktA EcSMS35_3077 - transketolase 2980 52.31 0 3168082..3168840 + 252 170682269 - EcSMS35_3078 - M48B family peptidase 2981 55.27 0 3168888..3169808 - 306 170682959 speB EcSMS35_3079 - agmatinase 2982 48.63 0 3169944..3170675 - 243 170683310 - EcSMS35_3080 - putative lipoprotein 2983 54.66 0 3170821..3172719 - 632 170679666 speA EcSMS35_3081 - arginine decarboxylase 2984 40.91 -1 3172806..3172937 - 43 170681127 - EcSMS35_3082 - hypothetical protein 2985 42.86 -1 3173285..3173536 - 83 170680030 - EcSMS35_3083 - hypothetical protein 2986 53.07 0 3173592..3174746 + 384 170681721 metK EcSMS35_3084 - S-adenosylmethionine synthetase 2987 53.41 0 3175182..3176576 + 464 170681091 galP EcSMS35_3085 - galactose-proton symporter 2988 56.22 +1 3176653..3177150 + 165 170682825 sprT EcSMS35_3086 - protein SprT 2989 54.24 0 3177245..3177952 + 235 170682683 endA EcSMS35_3087 - endonuclease I 2990 53.55 0 3178032..3178763 + 243 170682172 rsmE EcSMS35_3088 - 16S rRNA methyltransferase RsmE 2991 53.52 0 3178776..3179726 + 316 170683849 gshB EcSMS35_3089 - glutathione synthase 2992 51.60 0 3179835..3180398 + 187 170680665 - EcSMS35_3090 - hypothetical protein 2993 53.24 0 3180398..3180814 + 138 170681746 - EcSMS35_3091 - putative Holliday junction resolvase 2994 54.97 0 3180993..3182018 - 341 170680393 - EcSMS35_3092 - twitching motility family protein 2995 51.49 0 3181991..3182695 + 234 170683383 - EcSMS35_3093 - alanine racemase 2996 51.50 0 3182713..3183279 + 188 170683909 - EcSMS35_3094 - YGGT family protein 2997 47.77 0 3183276..3183566 + 96 170681809 - EcSMS35_3095 - hypothetical protein 2998 55.22 0 3183574..3184167 + 197 170679994 rdgB EcSMS35_3096 - RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 2999 52.15 0 3184160..3185296 + 378 170681312 - EcSMS35_3097 - putative oxygen-independent coproporphyrinogen III oxidase 3000 43.95 -1 3185365..3186372 - 335 170681863 - EcSMS35_3098 - hypothetical protein 3001 53.10 0 3186489..3187535 - 348 170682068 ansB_1 EcSMS35_3099 - L-asparaginase 2 3002 52.64 0 3187711..3188430 - 239 170682570 - EcSMS35_3100 - hypothetical protein 3003 50.35 0 3188451..3188591 - 46 170679978 - EcSMS35_3101 - hypothetical protein 3004 48.62 0 3188614..3188940 - 108 170682631 - EcSMS35_3102 - hypothetical protein 3005 53.19 0 3188940..3189659 - 239 170682679 trmB EcSMS35_3103 - tRNA (guanine-N(7)-)-methyltransferase 3006 54.70 0 3189820..3190872 + 350 170682894 mutY EcSMS35_3104 - A/G-specific adenine glycosylase 3007 47.46 0 3190900..3191175 + 91 170683828 - EcSMS35_3105 - hypothetical protein 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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