version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2845 52.65 0 3014304..3015059 + 251 170681600 xni EcSMS35_2938 - exodeoxyribonuclease-9 2846 53.91 0 3015164..3016315 - 383 170682829 fucO EcSMS35_2939 - lactaldehyde reductase 2847 49.54 0 3016340..3016987 - 215 170682130 fucA EcSMS35_2940 - L-fuculose phosphate aldolase 2848 36.96 -2 3017177..3017314 + 45 170683834 - EcSMS35_2941 - hypothetical protein 2849 47.23 0 3017534..3018850 + 438 170683163 fucP EcSMS35_2942 - L-fucose:H+ symporter permease 2850 54.67 0 3018883..3020658 + 591 170682875 fucI EcSMS35_2943 - L-fucose isomerase 2851 50.88 0 3020767..3022185 + 472 170682163 fucK EcSMS35_2944 - L-fuculokinase 2852 48.46 0 3022187..3022609 + 140 170683884 fucU EcSMS35_2945 - fucose operon protein FucU 2853 48.50 0 3022667..3023398 + 243 170683158 fucR EcSMS35_2946 - L-fucose operon activator 2854 52.32 0 3023442..3024542 - 366 170680808 - EcSMS35_2947 - hypothetical protein 2855 54.29 0 3024535..3024930 - 131 170684153 - EcSMS35_2948 - hypothetical protein 2856 49.35 0 3024949..3025866 - 305 170681756 gcvA EcSMS35_2949 - glycine cleavage system transcriptional activator 2857 46.49 0 3026218..3026445 - 75 170682370 - EcSMS35_2950 - putative lipoprotein 2858 56.05 +1 3026637..3027842 + 401 170680672 csdA EcSMS35_2951 - cysteine desulfurase, catalytic subunit CsdA 2859 55.41 0 3027842..3028285 + 147 170681430 csdE EcSMS35_2952 - cysteine desulfurase, sulfur acceptor subunit CsdE 2860 54.43 0 3028336..3029136 - 266 170680315 - EcSMS35_2953 - ThiF family protein 2861 53.09 0 3029219..3030286 - 355 170681128 mltA EcSMS35_2954 - membrane-bound lytic murein transglycosylase A 2862 44.20 -1 3030901..3031848 - 315 170684118 - EcSMS35_2958 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 2863 43.72 -1 3031920..3032516 - 198 170680141 - EcSMS35_2959 - KpsF/GutQ family sugar isomerase 2864 37.93 -2 3032519..3033694 - 391 170682367 - EcSMS35_2960 - aminotransferase, classes I and II 2865 44.34 -1 3033694..3035274 - 526 170683282 - EcSMS35_2961 - PTS system, maltose and glucose-specific IIBC component family protein 2866 34.18 -2 3035306..3036130 - 274 170680940 - EcSMS35_2962 - putative transcriptional antiterminator 2867 32.68 -2 3036226..3036378 + 50 170681355 - EcSMS35_2963 - hypothetical protein 2868 53.27 0 3036388..3037641 - 417 170681690 amiC1 EcSMS35_2964 - N-acetylmuramoyl-L-alanine amidase AmiC 2869 52.63 0 3037873..3039204 + 443 170680431 argA EcSMS35_2965 - amino-acid N-acetyltransferase 2870 54.79 0 3039266..3041092 - 608 170683529 recD EcSMS35_2966 - exodeoxyribonuclease V, alpha subunit 2871 54.54 0 3041092..3044604 - 1170 170684073 recB EcSMS35_2967 - exodeoxyribonuclease V, beta subunit 2872 51.16 0 3044627..3047515 - 962 170682458 ptrA EcSMS35_2968 - protease III 2873 53.84 0 3047691..3051059 - 1122 170683034 recC EcSMS35_2969 - exodeoxyribonuclease V, gamma subunit 2874 54.02 0 3051072..3051419 - 115 170682705 ppdC EcSMS35_2970 - prepilin peptidase-dependent protein C 2875 53.68 0 3051380..3051787 - 135 170683020 - EcSMS35_2971 - hypothetical protein 2876 52.30 0 3051784..3052347 - 187 170680768 ppdB EcSMS35_2972 - prepilin peptidase dependent protein B 2877 53.93 0 3052338..3052808 - 156 170680414 ppdA EcSMS35_2973 - prepilin peptidase-dependent protein A 2878 51.70 0 3052993..3053787 - 264 170684262 thyA EcSMS35_2974 - thymidylate synthase 2879 52.63 0 3053794..3054669 - 291 170683817 lgt EcSMS35_2975 - prolipoprotein diacylglyceryl transferase 2880 53.85 0 3054820..3057066 - 748 170682936 ptsP EcSMS35_2976 - phosphoenolpyruvate-protein phosphotransferase 2881 48.96 0 3057079..3057609 - 176 170682263 nudH EcSMS35_2977 - (di)nucleoside polyphosphate hydrolase 2882 39.51 -2 3058054..3058215 + 53 170681598 - EcSMS35_2978 - hypothetical protein 2883 53.77 0 3058294..3058983 + 229 170680941 mutH EcSMS35_2979 - DNA mismatch repair endonuclease MutH 2884 50.70 0 3059052..3059765 + 237 170681603 - EcSMS35_2980 - TerC family integral membrane protein 2885 43.38 -1 3059903..3060121 + 72 170680635 - EcSMS35_2981 - putative lipoprotein 2886 53.70 0 3060229..3061269 + 346 170681174 tas EcSMS35_2982 - NADP(H)-dependent aldo-keto reductase Tas 2887 55.36 0 3061301..3062494 - 397 170683196 lplT EcSMS35_2983 - lysophospholipid transporter 2888 52.78 0 3062487..3064646 - 719 170683715 aas EcSMS35_2984 - 2-acyl-glycerophospho-ethanolamine acyltransferase/acyl-acyl-carrier protein synthetase 2889 52.33 0 3065232..3066263 + 343 170682732 galR EcSMS35_2985 - transcriptional regulator GalR 2890 52.73 0 3066270..3067532 - 420 170683211 lysA EcSMS35_2986 - diaminopimelate decarboxylase 2891 53.31 0 3067654..3068589 + 311 170682032 lysR EcSMS35_2988 - transcriptional activator protein LysR 2892 50.36 0 3068576..3069268 - 230 170681384 - EcSMS35_2987 - aspartate racemase family protein 2893 51.73 0 3069397..3070815 - 472 170681217 araE EcSMS35_2989 - arabinose-proton symporter 2894 51.44 0 3071130..3071891 - 253 170681878 kduD EcSMS35_2990 - 2-deoxy-D-gluconate 3-dehydrogenase 2895 49.34 0 3071921..3072757 - 278 170680558 kduI EcSMS35_2991 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 2896 53.47 0 3073044..3074225 - 393 170680410 - EcSMS35_2992 - acetyl-CoA acetyltransferase 2897 44.47 -1 3074481..3075710 + 409 170684281 - EcSMS35_2993 - serine transporter family protein 2898 36.80 -2 3076284..3076802 + 172 170679934 - EcSMS35_2994 - hypothetical protein 2899 51.64 0 3076987..3077199 + 70 170682718 - EcSMS35_2995 - IS1 transposase orfA 2900 54.96 0 3077210..3077713 + 167 170682615 - EcSMS35_2996 - IS1 transposase orfB 2901 51.26 0 3078118..3078870 - 250 170683156 - EcSMS35_2998 - M23B family peptidase 2902 52.74 0 3079286..3081583 + 765 170681574 xdhA EcSMS35_2999 - xanthine dehydrogenase 2903 53.01 0 3081594..3082472 + 292 170682040 xdhB EcSMS35_3000 - xanthine dehydrogenase, FAD-binding subunit 2904 52.08 0 3082469..3082948 + 159 170681118 xdhC EcSMS35_3001 - xanthine dehydrogenase, iron-sulfur binding subunit 2905 46.04 0 3082988..3084766 - 592 170681642 - EcSMS35_3002 - sigma-54 dependent trancsriptional regulator 2906 50.29 0 3085243..3086433 + 396 170682685 - EcSMS35_3003 - aspartate/ornithine carbamoyltransferase family protein 2907 53.22 0 3086491..3087687 + 398 170681063 - EcSMS35_3004 - diaminopropionate ammonia-lyase 2908 51.65 0 3087745..3088956 + 403 170684131 - EcSMS35_3005 - M20/DapE family protein YgeY 2909 52.58 0 3088997..3090394 + 465 170682443 hyuA EcSMS35_3006 - dihydropyrimidinase 2910 49.52 0 3090442..3091374 + 310 170680720 - EcSMS35_3007 - carbamate kinase arcC-like protein 2911 52.58 0 3091415..3093040 - 541 170680222 - EcSMS35_3008 - putative xanthine dehydrogenase accessory factor 2912 50.19 0 3093088..3093858 - 256 170680868 - EcSMS35_3009 - hypothetical protein 2913 42.49 -1 3093961..3094539 + 192 170681481 - EcSMS35_3010 - hypothetical protein 2914 52.40 0 3094861..3097959 + 1032 170681388 - EcSMS35_3011 - pyridine nucleotide-disulfide family oxidoreductase 2915 52.52 0 3097962..3099290 + 442 170680729 ssnA EcSMS35_3012 - amidohydrolase family protein SsnA 2916 54.23 0 3099341..3100120 + 259 170682210 - EcSMS35_3013 - putative selenate reductase, FAD-binding subunit 2917 53.05 0 3100117..3102987 + 956 170683442 - EcSMS35_3014 - putative hypoxanthine oxidase XdhD 2918 49.18 0 3103152..3104552 + 466 170681803 - EcSMS35_3015 - xanthine/uracil permease family protein 2919 48.75 0 3104570..3105886 + 438 170682427 guaD EcSMS35_3016 - guanine deaminase 2920 52.85 0 3105922..3107289 + 455 170680723 - EcSMS35_3017 - sulfate permease family inorganic anion transporter 2921 55.21 0 3107325..3107813 - 162 170680835 - EcSMS35_3018 - 4Fe-4S binding protein 2922 53.13 0 3107813..3109747 - 644 170683856 aegA2 EcSMS35_3019 - protein aegA 2923 48.80 0 3110039..3111616 + 525 170679688 - EcSMS35_3020 - putative xanthine permease 2924 35.71 -2 3111618..3111743 + 41 170683489 - EcSMS35_3021 - hypothetical protein 2925 49.91 0 3111866..3112414 + 182 170684006 idi EcSMS35_3022 - isopentenyl-diphosphate delta-isomerase, type 1 2926 53.10 0 3112457..3113974 - 505 170682698 lysS EcSMS35_3023 - lysyl-tRNA synthetase LysS 2927 53.23 0 3113984..3115082 - 365 170682178 prfB EcSMS35_3024 - peptide chain release factor 2 2928 56.98 +1 3115173..3116906 - 577 170683389 recJ EcSMS35_3025 - single-stranded-DNA-specific exonuclease RecJ 2929 48.24 0 3116912..3117622 - 236 170682633 dsbC EcSMS35_3026 - thiol:disulfide interchange protein DsbC 2930 53.40 0 3117647..3118543 - 298 170681991 xerD EcSMS35_3027 - tyrosine recombinase XerD 2931 51.72 0 3118655..3119176 + 173 170683925 fldB EcSMS35_3028 - flavodoxin 2932 54.66 0 3119216..3119623 - 135 170683382 - EcSMS35_3029 - hypothetical protein 2933 49.44 0 3119604..3119870 - 88 170679885 - EcSMS35_3030 - TPR repeat-containing protein 2934 54.43 0 3120113..3121093 + 326 170683930 ygfZ EcSMS35_3031 - tRNA-modifying protein ygfZ 2935 52.58 0 3121170..3121829 - 219 170682502 - EcSMS35_3032 - hemolysin III family channel protein 2936 45.83 0 3121993..3122304 - 103 170683063 - EcSMS35_3033 - hypothetical protein 2937 50.76 0 3122343..3123782 + 479 170681438 bglA EcSMS35_3034 - 6-phospho-beta-glucosidase BglA 2938 55.88 0 3123946..3126819 - 957 170679779 gcvP EcSMS35_3035 - glycine dehydrogenase (decarboxylating) 2939 52.82 0 3126938..3127327 - 129 170680437 gcvH EcSMS35_3036 - glycine cleavage system H protein 2940 54.52 0 3127351..3128445 - 364 170683423 gcvT EcSMS35_3037 - glycine cleavage system T protein 2941 21.71 -2 3128621..3128749 - 42 170683999 - EcSMS35_3038 - hypothetical protein 2942 21.93 -2 3128706..3128819 + 37 170682333 - EcSMS35_3039 - hypothetical protein 2943 55.20 0 3128893..3130095 - 400 170683096 - EcSMS35_3040 - UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 2944 60.22 +1 3130118..3131296 - 392 170680909 ubiH EcSMS35_3041 - 2-octaprenyl-6-methoxyphenol hydroxylase 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0