version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2747 52.56 0 2916156..2917580 + 474 170680422 ascB EcSMS35_2840 - 6-phospho-beta-glucosidase 2748 50.79 0 2917667..2918422 - 251 170679781 - EcSMS35_2841 - hypothetical protein 2749 55.63 0 2918465..2918935 - 156 170679984 hycI EcSMS35_2842 - hydrogenase maturation peptidase HycI 2750 52.55 0 2918928..2919338 - 136 170684245 - EcSMS35_2843 - formate hydrogenlyase maturation protein 2751 57.42 +1 2919335..2920102 - 255 170683663 hycG EcSMS35_2844 - formate hydrogenlyase, subunit G 2752 55.43 0 2920102..2920644 - 180 170682605 hycF EcSMS35_2845 - formate hydrogenlyase, subunit F 2753 56.67 +1 2920654..2922384 - 576 170681957 hycE EcSMS35_2846 - formate hydrogenlyase, subunit E 2754 58.23 +1 2922381..2923304 - 307 170681545 hycD EcSMS35_2847 - formate hydrogenlyase, subunit D 2755 58.02 +1 2923307..2925133 - 608 170679710 hycC EcSMS35_2848 - formate hydrogenlyase, subunit C 2756 56.37 +1 2925130..2925741 - 203 170684164 hycB EcSMS35_2849 - formate hydrogenlyase, subunit B 2757 49.35 0 2925866..2926327 - 153 170682463 hycA EcSMS35_2850 - formate hydrogenlyase regulatory protein HycA 2758 52.62 0 2926527..2926889 + 120 170682833 hypA2 EcSMS35_2851 - hydrogenase nickel insertion protein HypA 2759 55.21 0 2926893..2927765 + 290 170682287 hypB EcSMS35_2852 - hydrogenase isoenzymes nickel incorporation protein HypB 2760 54.58 0 2927756..2928028 + 90 170682922 hypC2 EcSMS35_2853 - hydrogenase assembly chaperone HypC/HupF 2761 55.70 0 2928028..2929149 + 373 170680888 hypD EcSMS35_2854 - hydrogenase expression/formation protein HypD 2762 57.67 +1 2929146..2930156 + 336 170681565 hypE EcSMS35_2855 - hydrogenase expression/formation protein HypE 2763 52.43 0 2930230..2932308 + 692 170679601 fhlA EcSMS35_2856 - formate hydrogenlyase transcriptional activator 2764 48.93 0 2932314..2932781 + 155 170683621 - EcSMS35_2857 - molybdenum-pterin binding protein 2765 51.59 0 2932820..2933164 - 114 170684241 - EcSMS35_2858 - hypothetical protein 2766 44.44 -1 2933241..2933375 - 44 170680236 - EcSMS35_2859 - hypothetical protein 2767 56.17 +1 2933451..2936012 + 853 170680116 mutS EcSMS35_2860 - DNA mismatch repair protein MutS 2768 42.31 -1 2936118..2936774 + 218 170680634 pphB EcSMS35_2861 - serine/threonine-protein phosphatase 2 2769 55.27 0 2936816..2937052 - 78 170681138 kpdD EcSMS35_2862 - 4-hydroxybenzoate decarboxylase, subunit D 2770 57.70 +1 2937063..2938490 - 475 170681645 kpdC EcSMS35_2863 - 4-hydroxybenzoate decarboxylase, subunit C 2771 58.08 +1 2938490..2939083 - 197 170682784 kpdB EcSMS35_2864 - 4-hydroxybenzoate decarboxylase, subunit B 2772 51.47 0 2939230..2939637 + 135 170683273 - EcSMS35_2865 - MarR family transcriptional regulator 2773 52.17 0 2939757..2940749 - 330 170684160 rpoS EcSMS35_2866 - RNA polymerase sigma factor RpoS 2774 52.54 0 2940812..2941951 - 379 170679671 nlpD EcSMS35_2867 - lipoprotein NlpD 2775 53.75 0 2942091..2942717 - 208 170682160 pcm EcSMS35_2868 - protein-L-isoaspartate O-methyltransferase 2776 54.69 0 2942711..2943478 - 255 170681369 surE EcSMS35_2869 - multifunctional protein SurE 2777 52.19 0 2943453..2944502 - 349 170681051 truD EcSMS35_2870 - tRNA pseudouridine synthase D 2778 55.00 0 2944499..2944978 - 159 170680373 ispF EcSMS35_2871 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2779 55.27 0 2944978..2945688 - 236 170681257 ispD EcSMS35_2872 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2780 51.60 0 2945707..2946018 - 103 170680593 ftsB EcSMS35_2873 - cell division protein FtsB 2781 50.83 0 2946006..2946125 - 39 170682170 - EcSMS35_2874 - hypothetical protein 2782 47.22 0 2946212..2946535 - 107 170681455 - EcSMS35_2875 - hypothetical protein 2783 51.98 0 2946585..2947190 - 201 170683859 cysC EcSMS35_2876 - adenylylsulfate kinase 2784 54.41 0 2947190..2948617 - 475 170683324 cysN EcSMS35_2877 - sulfate adenylyltransferase, subunit 1 2785 53.69 0 2948619..2949527 - 302 170679929 cysD EcSMS35_2878 - sulfate adenylyltransferase, subunit 2 2786 49.13 0 2949779..2950816 + 345 170683777 iap EcSMS35_2879 - alkaline phosphatase isozyme conversion peptidase 2787 57.37 +1 2950813..2951124 + 103 170683268 - EcSMS35_2880 - hypothetical protein 2788 57.02 +1 2951918..2952031 + 37 170682057 - EcSMS35_2881 - hypothetical protein 2789 49.31 0 2952306..2952593 - 95 170684220 cas2 EcSMS35_2882 - CRISPR-associated Cas2 family protein 2790 51.62 0 2952596..2953519 - 307 170681830 cas1 EcSMS35_2883 - CRISPR-associated Cas1 family protein 2791 54.99 0 2953516..2954166 - 216 170681320 cse3 EcSMS35_2884 - CRISPR-associated Cse3 family protein 2792 54.75 0 2954148..2954894 - 248 170680474 cas5e EcSMS35_2885 - CRISPR-associated Cas5 family protein 2793 50.57 0 2954905..2955960 - 351 170679971 cse4 EcSMS35_2886 - CRISPR-associated Cse4 family protein 2794 51.96 0 2955975..2956511 - 178 170680421 cse2 EcSMS35_2887 - CRISPR-associated Cse2 family protein 2795 49.65 0 2956508..2958070 - 520 170683207 cse1 EcSMS35_2888 - CRISPR-associated Cse1 family protein 2796 51.15 0 2958168..2960867 - 899 170680605 cas3 EcSMS35_2889 - CRISPR-associated helicase Cas3 2797 50.48 0 2961479..2962213 - 244 170680095 cysH EcSMS35_2890 - phosphoadenosine phosphosulfate reductase 2798 55.87 0 2962287..2963999 - 570 170681318 cysI EcSMS35_2891 - sulfite reductase (NADPH) hemoprotein, beta-component 2799 56.72 +1 2963999..2965798 - 599 170680548 cysJ EcSMS35_2892 - sulfite reductase [NADPH] flavoprotein, alpha-component 2800 39.47 -2 2966011..2966124 - 37 170682745 - EcSMS35_2893 - hypothetical protein 2801 49.59 0 2966117..2966479 + 120 170682185 queD EcSMS35_2894 - queuosine biosynthesis protein QueD 2802 55.42 0 2966557..2967828 + 423 170683360 - EcSMS35_2895 - pyridine nucleotide-disulphide oxidoreductase family protein 2803 52.87 0 2967819..2968079 + 86 170682567 - EcSMS35_2896 - putative ferredoxin 2804 47.22 0 2968096..2968671 + 191 170679687 - EcSMS35_2897 - glycerol-3-phosphate responsive antiterminator 2805 55.40 0 2968818..2969678 - 286 170682876 - EcSMS35_2898 - electron transfer flavoprotein 2806 55.51 0 2969675..2970454 - 259 170680852 - EcSMS35_2899 - electron transfer flavoprotein 2807 54.26 0 2970432..2971769 - 445 170681816 - EcSMS35_2900 - major facilitator family transporter 2808 50.79 0 2971863..2973317 - 484 170679795 - EcSMS35_2901 - FAD binding domain-containing protein 2809 45.29 0 2973387..2974172 - 261 170680420 - EcSMS35_2902 - short chain dehydrogenase/reductase family oxidoreductase 2810 49.06 0 2974490..2975767 + 425 170683431 - EcSMS35_2903 - major facilitator family transporter 2811 49.02 0 2975794..2977272 + 492 170679797 - EcSMS35_2904 - carbohydrate kinase, FGGY family protein 2812 47.77 0 2977437..2978357 + 306 170682402 scrK EcSMS35_2905 - fructokinase 2813 46.90 0 2978525..2980042 + 505 170682892 scrY EcSMS35_2906 - sucrose porin ScrY 2814 46.46 0 2980103..2981473 + 456 170681405 scrA EcSMS35_2907 - PTS system sucrose-specific EIIBC component ScrA 2815 48.50 0 2981479..2982882 + 467 170680697 scrB EcSMS35_2908 - beta-fructofuranosidase 2816 47.22 0 2982908..2983915 + 335 170682803 scrR EcSMS35_2909 - sucrose operon repressor 2817 51.79 0 2984001..2984672 - 223 170682101 - EcSMS35_2910 - hypothetical protein 2818 35.09 -2 2984706..2984819 + 37 170681100 - EcSMS35_2911 - hypothetical protein 2819 42.62 -1 2984845..2985447 + 200 170682799 - EcSMS35_2912 - LemA family protein 2820 48.43 0 2985461..2986354 + 297 170680054 - EcSMS35_2913 - hypothetical protein 2821 45.60 0 2986369..2987517 + 382 170681683 - EcSMS35_2914 - hypothetical protein 2822 43.28 -1 2987511..2988395 + 294 170683146 - EcSMS35_2915 - hypothetical protein 2823 53.88 0 2988512..2989840 + 442 170680259 - EcSMS35_2916 - IS4 transposase 2824 50.50 0 2989895..2991193 - 432 170684207 eno EcSMS35_2917 - phosphopyruvate hydratase 2825 51.95 0 2991280..2992917 - 545 170680423 pyrG EcSMS35_2918 - CTP synthase 2826 50.88 0 2993145..2993936 - 263 170682107 - EcSMS35_2919 - MazG family protein 2827 47.92 0 2994008..2994343 - 111 170683531 chpA EcSMS35_2920 - pemK protein 1 2828 47.79 0 2994343..2994591 - 82 170682877 chpR EcSMS35_2921 - pemI protein 1 2829 53.83 0 2994669..2996903 - 744 170682452 relA EcSMS35_2922 - GTP diphosphokinase 2830 50.92 0 2996951..2998252 - 433 170681551 rumA EcSMS35_2923 - 23S rRNA (uracil-5-)-methyltransferase RumA 2831 49.69 0 2998309..3001065 + 918 170680902 barA EcSMS35_2924 - sensor histidine kinase/response regulator BarA 2832 53.69 0 3001296..3002636 - 446 170680334 - EcSMS35_2925 - glucarate dehydratase 2833 54.14 0 3002657..3003997 - 446 170679833 - EcSMS35_2926 - glucarate dehydratase 2834 52.18 0 3003999..3005351 - 450 170684213 gudP EcSMS35_2927 - glucarate permease 2835 47.62 0 3005446..3005571 - 41 170683781 - EcSMS35_2928 - hypothetical protein 2836 41.86 -1 3005565..3005693 + 42 170681822 - EcSMS35_2929 - hypothetical protein 2837 51.78 0 3005786..3006235 - 149 170679697 - EcSMS35_2930 - flavodoxin 2838 54.53 0 3006253..3007035 - 260 170682843 truC EcSMS35_2931 - tRNA pseudouridine synthase C 2839 52.73 0 3007035..3007364 - 109 170681308 - EcSMS35_2932 - hypothetical protein 2840 47.99 0 3007986..3008531 - 181 170683510 - EcSMS35_2933 - syd protein 2841 49.12 0 3008599..3009447 + 282 170684047 queF EcSMS35_2934 - queuine synthase 2842 51.36 0 3009559..3010923 + 454 170680380 - EcSMS35_2935 - hypothetical protein 2843 52.25 0 3011479..3012768 + 429 170683290 - EcSMS35_2936 - serine transporter family protein 2844 54.31 0 3012826..3014193 + 455 170680778 sdaB EcSMS35_2937 - L-serine ammonia-lyase 2 2845 52.65 0 3014304..3015059 + 251 170681600 xni EcSMS35_2938 - exodeoxyribonuclease-9 2846 53.91 0 3015164..3016315 - 383 170682829 fucO EcSMS35_2939 - lactaldehyde reductase 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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