version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2677 52.13 0 2842745..2843611 + 288 170681191 - EcSMS35_2763 - putative cytochrome C assembly protein 2678 50.91 0 2843656..2844918 + 420 170681983 - EcSMS35_2764 - CBS/transporter associated domain-containing protein 2679 42.74 -1 2845042..2845647 + 201 170681847 - EcSMS35_2765 - hypothetical protein 2680 50.93 0 2845682..2846272 - 196 170681212 grpE EcSMS35_2766 - co-chaperone GrpE 2681 50.06 0 2846395..2847273 + 292 170679880 ppnK EcSMS35_2767 - NAD(+) kinase 2682 51.99 0 2847359..2849020 + 553 170683348 recN EcSMS35_2768 - DNA repair protein RecN 2683 50.00 0 2849169..2849510 + 113 170680255 - EcSMS35_2769 - SmpA/OmlA family lipoprotein 2684 51.20 0 2849572..2849862 - 96 170681237 - EcSMS35_2770 - RnfH family protein 2685 47.17 0 2849852..2850328 - 158 170683083 - EcSMS35_2771 - polyketide cyclase/dehydrase family protein 2686 51.55 0 2850460..2850942 + 160 170679596 smpB EcSMS35_2772 - SsrA-binding protein 2687 49.72 0 2851680..2856377 - 1565 170679851 - EcSMS35_2773 - hypothetical protein 2688 46.67 0 2856313..2856432 - 39 170681339 - EcSMS35_2774 - hypothetical protein 2689 36.67 -2 2857184..2857933 - 249 170680843 - EcSMS35_2775 - hypothetical protein 2690 37.95 -2 2860012..2862264 + 750 170681220 - EcSMS35_2778 - alpha amylase family protein 2691 53.37 0 2862601..2863578 + 325 170682703 - EcSMS35_2779 - protein CsiD 2692 57.05 +1 2863598..2864866 + 422 170682247 - EcSMS35_2780 - FAD dependent oxidoreductase 2693 57.49 +1 2864889..2866337 + 482 170679622 gabD EcSMS35_2781 - succinate-semialdehyde dehydrogenase (NAD(P)(+)) 2694 59.80 +1 2866351..2867631 + 426 170683877 gabT2 EcSMS35_2782 - 4-aminobutyrate transaminase 2695 51.25 0 2867868..2869268 + 466 170680659 gabP EcSMS35_2783 - gamma-aminobutyrate permease 2696 53.70 0 2869289..2869951 + 220 170683260 csiR EcSMS35_2784 - gab operon transcriptional repressor CsiR 2697 49.11 0 2869952..2870401 - 149 170681151 - EcSMS35_2785 - phospholipid-binding protein 2698 50.94 0 2870485..2870643 - 52 170681644 - EcSMS35_2786 - hypothetical protein 2699 53.00 0 2870826..2871125 + 99 170681146 - EcSMS35_2787 - ArsR family transcriptional regulator 2700 46.10 0 2871135..2871659 + 174 170681672 - EcSMS35_2788 - putative inner membrane protein 2701 49.38 0 2871706..2872110 - 134 170679595 stpA EcSMS35_2789 - H-NS histone family protein StpA 2702 49.11 0 2872778..2873227 + 149 170680685 - EcSMS35_2790 - hypothetical protein 2703 46.38 0 2873264..2873608 - 114 170683315 - EcSMS35_2791 - hypothetical protein 2704 53.64 0 2873760..2874089 + 109 170683774 - EcSMS35_2792 - hypothetical protein 2705 52.58 0 2874146..2875480 - 444 170681638 - EcSMS35_2793 - GntR family transcriptional regulator 2706 52.08 0 2875568..2875999 + 143 170681664 - EcSMS35_2794 - carboxymuconolactone decarboxylase family protein 2707 54.07 0 2876208..2876453 + 81 170682324 nrdH EcSMS35_2795 - glutaredoxin 2708 56.45 +1 2876450..2876860 + 136 170683274 nrdI EcSMS35_2796 - nrdI protein 2709 51.98 0 2876833..2878977 + 714 170683654 nrdE EcSMS35_2797 - ribonucleoside-diphosphate reductase, alpha subunit 2710 47.60 0 2878987..2879946 + 319 170684037 nrdF EcSMS35_2798 - ribonucleoside-diphosphate reductase, beta subunit 2711 48.71 0 2880302..2881504 + 400 170679605 proV EcSMS35_2799 - glycine betaine/L-proline ABC transporter, ATP binding protein 2712 58.50 +1 2881497..2882561 + 354 170680258 proW EcSMS35_2800 - glycine betaine/L-proline ABC transporter, permease protein 2713 51.66 0 2882619..2883611 + 330 170681945 proX EcSMS35_2801 - glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein 2714 38.78 -2 2883664..2883810 + 48 170682617 - EcSMS35_2802 - hypothetical protein 2715 55.36 0 2883803..2884987 + 394 170682932 - EcSMS35_2803 - major facilitator family transporter 2716 52.24 0 2885156..2885848 + 230 170680260 - EcSMS35_2804 - branched chain amino acid ABC transporter 2717 55.06 0 2885838..2886173 + 111 170682354 - EcSMS35_2805 - hypothetical protein 2718 49.15 0 2886264..2886794 + 176 170681637 mprA EcSMS35_2806 - transcriptional repressor MprA 2719 52.77 0 2886921..2888093 + 390 170682707 emrA EcSMS35_2807 - multidrug resistance protein A 2720 56.47 +1 2888110..2889648 + 512 170682086 emrB EcSMS35_2808 - multidrug resistance protein B 2721 52.13 0 2889712..2890227 - 171 170683741 luxS EcSMS35_2809 - S-ribosylhomocysteinase (LuxS) 2722 51.57 0 2890377..2891933 - 518 170683222 gshA EcSMS35_2810 - glutamate--cysteine ligase 2723 49.18 0 2892006..2892434 - 142 170681345 - EcSMS35_2811 - hypothetical protein 2724 53.79 0 2892431..2892997 - 188 170680864 - EcSMS35_2812 - HAD family hydrolase 2725 49.46 0 2894185..2894370 - 61 170682990 csrA EcSMS35_2818 - carbon storage regulator 2726 43.59 -1 2894480..2894596 + 38 170681206 - EcSMS35_2819 - hypothetical protein 2727 53.40 0 2894605..2897235 - 876 170682603 alaS EcSMS35_2820 - alanyl-tRNA synthetase 2728 51.50 0 2897364..2897864 - 166 170682194 recX EcSMS35_2821 - regulatory protein RecX 2729 53.67 0 2897933..2898994 - 353 170683219 recA EcSMS35_2822 - protein RecA 2730 56.22 +1 2899074..2899571 - 165 170680608 - EcSMS35_2823 - competence/damage inducible protein CinA 2731 54.14 0 2899716..2900801 - 361 170680146 mltB EcSMS35_2824 - lytic murein transglycosylase B 2732 49.29 0 2901058..2901621 + 187 170681685 srlA EcSMS35_2825 - PTS system, glucitol/sorbitol-specific, IIC component 2733 54.58 0 2901618..2902577 + 319 170681652 srlE EcSMS35_2826 - PTS system, glucitol/sorbitol-specific, IIB component 2734 56.18 +1 2902588..2902959 + 123 170681142 srlB EcSMS35_2827 - PTS system, glucitol/sorbitol-specific, IIA component 2735 52.95 0 2902963..2903742 + 259 170682204 srlD EcSMS35_2828 - sorbitol-6-phosphate 2-dehydrogenase 2736 54.72 0 2903848..2904207 + 119 170683226 gutM EcSMS35_2829 - glucitol operon activator protein 2737 48.06 0 2904274..2905047 + 257 170680292 srlR EcSMS35_2830 - glucitol operon repressor 2738 56.83 +1 2905040..2906005 + 321 170680279 gutQ EcSMS35_2832 - gutQ protein 2739 57.23 +1 2906002..2907516 - 504 170679621 norR EcSMS35_2831 - anaerobic nitric oxide reductase transcription regulator NorR 2740 53.40 0 2907703..2909142 + 479 170679642 norV EcSMS35_2833 - anaerobic nitric oxide reductase flavorubredoxin 2741 53.97 0 2909139..2910272 + 377 170681646 norW EcSMS35_2834 - nitric oxide reductase FlRd-NAD(+) reductase 2742 57.97 +1 2910351..2912639 - 762 170680945 hypF EcSMS35_2835 - [NiFe] hydrogenase maturation protein HypF 2743 52.27 0 2912744..2913271 - 175 170682992 - EcSMS35_2836 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2744 35.12 -2 2913249..2913416 - 55 170682276 - EcSMS35_2837 - hypothetical protein 2745 52.61 0 2913420..2914472 - 350 170683113 ascG EcSMS35_2838 - transcriptional regulator AscG 2746 55.90 0 2914690..2916147 + 485 170682118 ascF EcSMS35_2839 - PTS system, arbutin-, cellobiose-, and salicin-specific, EIIBC component 2747 52.56 0 2916156..2917580 + 474 170680422 ascB EcSMS35_2840 - 6-phospho-beta-glucosidase 2748 50.79 0 2917667..2918422 - 251 170679781 - EcSMS35_2841 - hypothetical protein 2749 55.63 0 2918465..2918935 - 156 170679984 hycI EcSMS35_2842 - hydrogenase maturation peptidase HycI 2750 52.55 0 2918928..2919338 - 136 170684245 - EcSMS35_2843 - formate hydrogenlyase maturation protein 2751 57.42 +1 2919335..2920102 - 255 170683663 hycG EcSMS35_2844 - formate hydrogenlyase, subunit G 2752 55.43 0 2920102..2920644 - 180 170682605 hycF EcSMS35_2845 - formate hydrogenlyase, subunit F 2753 56.67 +1 2920654..2922384 - 576 170681957 hycE EcSMS35_2846 - formate hydrogenlyase, subunit E 2754 58.23 +1 2922381..2923304 - 307 170681545 hycD EcSMS35_2847 - formate hydrogenlyase, subunit D 2755 58.02 +1 2923307..2925133 - 608 170679710 hycC EcSMS35_2848 - formate hydrogenlyase, subunit C 2756 56.37 +1 2925130..2925741 - 203 170684164 hycB EcSMS35_2849 - formate hydrogenlyase, subunit B 2757 49.35 0 2925866..2926327 - 153 170682463 hycA EcSMS35_2850 - formate hydrogenlyase regulatory protein HycA 2758 52.62 0 2926527..2926889 + 120 170682833 hypA2 EcSMS35_2851 - hydrogenase nickel insertion protein HypA 2759 55.21 0 2926893..2927765 + 290 170682287 hypB EcSMS35_2852 - hydrogenase isoenzymes nickel incorporation protein HypB 2760 54.58 0 2927756..2928028 + 90 170682922 hypC2 EcSMS35_2853 - hydrogenase assembly chaperone HypC/HupF 2761 55.70 0 2928028..2929149 + 373 170680888 hypD EcSMS35_2854 - hydrogenase expression/formation protein HypD 2762 57.67 +1 2929146..2930156 + 336 170681565 hypE EcSMS35_2855 - hydrogenase expression/formation protein HypE 2763 52.43 0 2930230..2932308 + 692 170679601 fhlA EcSMS35_2856 - formate hydrogenlyase transcriptional activator 2764 48.93 0 2932314..2932781 + 155 170683621 - EcSMS35_2857 - molybdenum-pterin binding protein 2765 51.59 0 2932820..2933164 - 114 170684241 - EcSMS35_2858 - hypothetical protein 2766 44.44 -1 2933241..2933375 - 44 170680236 - EcSMS35_2859 - hypothetical protein 2767 56.17 +1 2933451..2936012 + 853 170680116 mutS EcSMS35_2860 - DNA mismatch repair protein MutS 2768 42.31 -1 2936118..2936774 + 218 170680634 pphB EcSMS35_2861 - serine/threonine-protein phosphatase 2 2769 55.27 0 2936816..2937052 - 78 170681138 kpdD EcSMS35_2862 - 4-hydroxybenzoate decarboxylase, subunit D 2770 57.70 +1 2937063..2938490 - 475 170681645 kpdC EcSMS35_2863 - 4-hydroxybenzoate decarboxylase, subunit C 2771 58.08 +1 2938490..2939083 - 197 170682784 kpdB EcSMS35_2864 - 4-hydroxybenzoate decarboxylase, subunit B 2772 51.47 0 2939230..2939637 + 135 170683273 - EcSMS35_2865 - MarR family transcriptional regulator 2773 52.17 0 2939757..2940749 - 330 170684160 rpoS EcSMS35_2866 - RNA polymerase sigma factor RpoS 2774 52.54 0 2940812..2941951 - 379 170679671 nlpD EcSMS35_2867 - lipoprotein NlpD 2775 53.75 0 2942091..2942717 - 208 170682160 pcm EcSMS35_2868 - protein-L-isoaspartate O-methyltransferase 2776 54.69 0 2942711..2943478 - 255 170681369 surE EcSMS35_2869 - multifunctional protein SurE 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0