version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2237 51.79 0 2337411..2338499 + 362 170683507 - EcSMS35_2307 - PfkB family kinase 2238 51.08 0 2338555..2339805 - 416 170684054 - EcSMS35_2308 - NupC family nucleoside transporter 2239 51.70 0 2339905..2340846 - 313 170683370 - EcSMS35_2309 - inosine-uridine preferring nucleoside hydrolase family protein 2240 43.35 -1 2340976..2341674 + 232 170683945 nsr EcSMS35_2310 - regulatory protein Nsr 2241 50.76 0 2341742..2342992 - 416 170681919 - EcSMS35_2311 - NupC family nucleoside transporter 2242 48.56 0 2343086..2344024 - 312 170682601 - EcSMS35_2312 - indigoidine synthase A like protein 2243 47.13 0 2344012..2344953 - 313 170680599 - EcSMS35_2313 - kinase, pfkB family protein 2244 56.03 +1 2345377..2347068 - 563 170681268 fruA EcSMS35_2314 - PTS system, fructose-specific, IIBC component 2245 53.89 0 2347085..2348023 - 312 170681800 fruK EcSMS35_2315 - 1-phosphofructokinase 2246 55.53 0 2348023..2349153 - 376 170683388 fruB EcSMS35_2316 - PTS system fructose-specific phosphotransferase enzyme IIA component 2247 40.15 -1 2349319..2349450 + 43 170683990 - EcSMS35_2317 - hypothetical protein 2248 52.79 0 2349521..2350702 + 393 170680537 setB EcSMS35_2319 - sugar efflux transporter B 2249 55.69 0 2350699..2350953 - 84 170679926 - EcSMS35_2318 - hypothetical protein 2250 49.56 0 2351108..2351680 + 190 170681704 - EcSMS35_2320 - elongation factor P family protein 2251 51.87 0 2351903..2353369 + 488 170680151 - EcSMS35_2321 - mannitol dehydrogenase family protein 2252 54.61 0 2353487..2354473 + 328 170681990 - EcSMS35_2322 - CobW/P47K family protein 2253 43.70 -1 2354512..2355225 + 237 170682623 - EcSMS35_2323 - PAP2 family protein 2254 47.27 0 2355637..2356203 + 188 170681203 - EcSMS35_2324 - NlpC/P60 family protein 2255 49.78 0 2356384..2357940 + 518 170681845 - EcSMS35_2325 - putative cyclic diguanylate phosphodiesterase 2256 50.63 0 2358022..2359836 + 604 170681154 - EcSMS35_2326 - ABC transporter, periplasmic solute-binding protein 2257 51.69 0 2359837..2360931 + 364 170681691 - EcSMS35_2327 - ABC transporter, permease protein 2258 53.51 0 2360931..2361956 + 341 170680077 - EcSMS35_2328 - ABC transporter, permease protein 2259 51.45 0 2361958..2363547 + 529 170680600 - EcSMS35_2329 - ABC transporter, ATP-binding protein 2260 49.28 0 2363551..2363895 - 114 170682649 - EcSMS35_2330 - hypothetical protein 2261 53.15 0 2364229..2365419 - 396 170683634 bcr EcSMS35_2331 - bicyclomycin resistance protein 2262 53.30 0 2365447..2366142 - 231 170681582 rsuA EcSMS35_2332 - ribosomal small subunit pseudouridine synthase A 2263 53.15 0 2366292..2368052 + 586 170682105 - EcSMS35_2333 - putative helicase 2264 50.18 0 2368177..2368461 + 94 170680132 rplY EcSMS35_2334 - ribosomal L25p family protein 2265 52.38 0 2368600..2369607 - 335 170680719 ndpA EcSMS35_2335 - nucleoid-associated protein NdpA 2266 38.46 -2 2369652..2369768 - 38 170682652 - EcSMS35_2336 - hypothetical protein 2267 50.00 0 2369789..2370016 + 75 170683474 - EcSMS35_2337 - hypothetical protein 2268 52.07 0 2370036..2371796 + 586 170681591 - EcSMS35_2338 - sulfatase family protein 2269 52.78 0 2374961..2375608 + 215 170679777 narP EcSMS35_2341 - nitrate/nitrite response regulator NarP 2270 54.42 0 2375643..2376695 - 350 170680448 - EcSMS35_2342 - cytochrome c-type biogenesis family protein 2271 55.20 0 2376692..2377249 - 185 170684059 dsbE EcSMS35_2343 - thiol:disulfide interchange protein DsbE 2272 57.41 +1 2377246..2379189 - 647 170679920 ccmF EcSMS35_2344 - cytochrome c-type biogenesis protein CcmF 2273 53.33 0 2379186..2379665 - 159 170680024 ccmE EcSMS35_2345 - cytochrome c-type biogenesis protein CcmE 2274 58.10 +1 2379662..2379871 - 69 170681750 ccmD EcSMS35_2346 - heme exporter protein D 2275 55.69 0 2379868..2380605 - 245 170683112 ccmC EcSMS35_2347 - heme exporter protein C 2276 56.71 +1 2380647..2381309 - 220 170680661 ccmB EcSMS35_2348 - heme exporter protein CcmB 2277 55.83 0 2381306..2381923 - 205 170682203 ccmA EcSMS35_2349 - heme ABC exporter, ATP-binding protein CcmA 2278 51.58 0 2381942..2382544 - 200 170683912 napC EcSMS35_2350 - cytochrome c-type protein napC 2279 56.44 +1 2382554..2383003 - 149 170681658 napB EcSMS35_2351 - periplasmic nitrate reductase, diheme cytochrome c subunit 2280 55.79 0 2383000..2383863 - 287 170681157 napH EcSMS35_2352 - periplasmic nitrate reductase, NapH 2281 59.34 +1 2383850..2384545 - 231 170680735 napG EcSMS35_2353 - periplasmic nitrate reductase, NapG 2282 55.89 0 2384552..2387038 - 828 170679943 napA EcSMS35_2354 - periplasmic nitrate reductase, large subunit 2283 54.17 0 2387035..2387298 - 87 170683051 napD EcSMS35_2355 - NapD protein 2284 54.34 0 2387288..2387782 - 164 170682644 napF EcSMS35_2356 - ferredoxin-type protein NapF 2285 40.00 -1 2387891..2388055 + 54 170680170 - EcSMS35_2357 - hypothetical protein 2286 49.90 0 2388190..2388678 + 162 170679765 eco EcSMS35_2358 - ecotin 2287 54.22 0 2388828..2390474 - 548 170684210 mqo EcSMS35_2359 - malate dehydrogenase (acceptor) 2288 53.35 0 2390692..2392335 - 547 170683689 - EcSMS35_2360 - ABC transporter ATP-binding protein 2289 53.00 0 2392411..2393061 - 216 170682238 alkB EcSMS35_2361 - alkylated DNA repair protein AlkB 2290 57.18 +1 2393061..2394125 - 354 170684032 ada EcSMS35_2362 - regulatory protein Ada 2291 53.69 0 2394199..2395254 - 351 170681131 apbE EcSMS35_2363 - thiamine biosynthesis lipoprotein ApbE 2292 48.68 0 2395366..2396460 - 364 170680935 ompC EcSMS35_2364 - outer membrane protein C 2293 49.72 0 2397199..2399871 + 890 170683966 yojN EcSMS35_2365 - sensor histidine kinase YojN 2294 48.08 0 2399888..2400538 + 216 170682257 rcsB EcSMS35_2366 - capsular synthesis regulator component B 2295 50.74 0 2400624..2403473 - 949 170679899 rcsC EcSMS35_2367 - sensor histidine kinase/response regulator RcsC 2296 48.88 0 2403640..2405466 + 608 170680522 atoS EcSMS35_2368 - sensory box histidine kinase AtoS 2297 49.42 0 2405463..2406848 + 461 170681202 atoC EcSMS35_2369 - sigma-54 dependent response regulator AtoC 2298 53.54 0 2407044..2407706 + 220 170681854 pcaI EcSMS35_2370 - 3-oxoadipate CoA-transferase, subunit A 2299 53.15 0 2407706..2408356 + 216 170682047 - EcSMS35_2371 - 3-oxoacid CoA-transferase, B subunit 2300 53.06 0 2408353..2409675 + 440 170682719 - EcSMS35_2372 - putative short chain fatty acid transporter 2301 53.08 0 2409706..2410890 + 394 170683363 atoB EcSMS35_2373 - acetyl-CoA acetyltransferase 2302 53.54 0 2410964..2411740 - 258 170684048 - EcSMS35_2374 - hypothetical protein 2303 54.91 0 2411745..2413394 - 549 170680053 - EcSMS35_2375 - hypothetical protein 2304 53.42 0 2413395..2417909 - 1504 170680850 - EcSMS35_2376 - alpha-2-macroglobulin family protein 2305 50.64 0 2417933..2418556 - 207 170681110 - EcSMS35_2377 - hypothetical protein 2306 50.86 0 2418553..2420241 - 562 170682837 - EcSMS35_2378 - hypothetical protein 2307 54.03 0 2420390..2423017 - 875 170681961 gyrA EcSMS35_2379 - DNA gyrase, A subunit 2308 40.81 -1 2423517..2424719 - 400 170684206 - EcSMS35_2380 - mandelate racemase/muconate lactonizing enzyme family protein 2309 40.11 -1 2424732..2426060 - 442 170683353 - EcSMS35_2381 - major facilitator transporter 2310 35.62 -2 2426298..2426996 + 232 170680188 - EcSMS35_2382 - GntR family transcriptional regulator 2311 52.84 0 2427074..2427796 + 240 170680509 ubiG EcSMS35_2383 - 3-demethylubiquinone-9 3-O-methyltransferase 2312 49.93 0 2427935..2431699 - 1254 170679991 - EcSMS35_2384 - outer membrane autotransporter 2313 53.72 0 2432395..2434680 + 761 170682262 nrdA EcSMS35_2385 - ribonucleoside-diphosphate reductase, alpha subunit 2314 50.59 0 2434775..2435956 + 393 170682190 nrdB EcSMS35_2386 - ribonucleoside-diphosphate reductase, beta subunit 2315 56.47 +1 2435956..2436210 + 84 170682918 - EcSMS35_2387 - 2Fe-2S iron-sulfur cluster-binding protein 2316 49.77 0 2436264..2436914 - 216 170683449 - EcSMS35_2388 - putative lipopolysaccharide kinase InaA 2317 48.70 0 2436995..2438185 - 396 170683695 - EcSMS35_2389 - major facilitator transporter 2318 43.11 -1 2438337..2439236 + 299 170680085 - EcSMS35_2390 - LysR family transcriptional regulator 2319 46.15 0 2439256..2440332 - 358 170679810 glpQ EcSMS35_2391 - glycerophosphoryl diester phosphodiesterase GlpQ 2320 53.35 0 2440337..2441695 - 452 170680293 glpT EcSMS35_2392 - glycerol-3-phosphate transporter 2321 57.70 +1 2441967..2443595 + 542 170681702 glpA EcSMS35_2393 - anaerobic glycerol-3-phosphate dehydrogenase subunit, A 2322 56.35 +1 2443585..2444844 + 419 170681464 glpB EcSMS35_2394 - anaerobic glycerol-3-phosphate dehydrogenase, subunit B 2323 53.74 0 2444841..2446031 + 396 170683880 glpC EcSMS35_2395 - sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit 2324 49.21 0 2446056..2446181 + 41 170679950 - EcSMS35_2396 - hypothetical protein 2325 48.75 0 2446224..2447183 + 319 170680731 - EcSMS35_2397 - hypothetical protein 2326 51.61 0 2447196..2447381 + 61 170681046 - EcSMS35_2398 - hypothetical protein 2327 53.98 0 2447422..2448225 - 267 170681725 - EcSMS35_2399 - HpcH/HpaI aldolase/citrate lyase family protein 2328 53.26 0 2448243..2449532 - 429 170682702 - EcSMS35_2400 - major facilitator transporter 2329 52.16 0 2449589..2450794 - 401 170683394 - EcSMS35_2401 - mandelate racemase/muconate lactonizing enzyme family protein 2330 50.83 0 2450809..2451591 - 260 170683760 - EcSMS35_2402 - IclR family transcriptional regulator 2331 54.78 0 2451811..2453013 - 400 170680019 - EcSMS35_2403 - CinA family protein 2332 53.96 0 2453113..2453655 - 180 170680698 - EcSMS35_2404 - outer membrane protein, YfaZ 2333 49.04 0 2453996..2454358 + 120 170679641 - EcSMS35_2405 - NUDIX family hydrolase 2334 43.12 -1 2454397..2454999 - 200 170683969 - EcSMS35_2406 - phosphoglycerate mutase family protein 2335 51.64 0 2455289..2456446 + 385 170683278 arnB EcSMS35_2407 - UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 2336 50.57 0 2456450..2457418 + 322 170683519 arnC EcSMS35_2408 - undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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