version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2152 49.53 0 2237614..2238354 + 246 170681252 pflA EcSMS35_2219 - pyruvate formate-lyase 1-activating enzyme 2153 48.15 0 2238564..2239994 - 476 170680872 - EcSMS35_2220 - amino acid permease family protein 2154 52.22 0 2240204..2241352 - 382 170682710 - EcSMS35_2221 - major facilitator family transporter 2155 41.09 -1 2241383..2241511 + 42 170682202 - EcSMS35_2222 - hypothetical protein 2156 45.77 0 2241667..2242293 + 208 170684157 - EcSMS35_2223 - isochorismatase family protein 2157 54.40 0 2242329..2243192 - 287 170683650 dmsC1 EcSMS35_2224 - anaerobic dimethyl sulfoxide reductase, C subunit 2158 52.27 0 2243194..2243811 - 205 170680702 dmsB_2 EcSMS35_2225 - dimethylsulfoxide reductase, B subunit 2159 52.19 0 2243822..2246266 - 814 170680161 dmsA EcSMS35_2226 - anaerobic dimethyl sulfoxide reductase, A subunit 2160 52.90 0 2246505..2247797 - 430 170683015 serS EcSMS35_2227 - seryl-tRNA synthetase 2161 53.42 0 2247888..2249231 - 447 170682500 - EcSMS35_2228 - putative DNA recombination-associated ATPase RarA 2162 51.14 0 2249242..2249853 - 203 170684020 lolA EcSMS35_2229 - outer membrane lipoprotein carrier protein LolA 2163 54.14 0 2250012..2254121 - 1369 170683476 ftsK EcSMS35_2230 - DNA translocase FtsK 2164 48.08 0 2254256..2254750 - 164 170679860 lrp EcSMS35_2231 - leucine responsive regulatory protein 2165 38.60 -2 2255113..2255226 - 37 170681503 - EcSMS35_2232 - hypothetical protein 2166 53.21 0 2255295..2256260 + 321 170680886 trxB EcSMS35_2233 - thioredoxin-disulfide reductase 2167 53.08 0 2256383..2258149 + 588 170682589 cydD EcSMS35_2234 - cysteine ABC transporter permease/ATP-binding protein 2168 53.60 0 2258150..2259871 + 573 170682378 cudC EcSMS35_2235 - cysteine ABC transporter permease/ATP-binding protein 2169 53.76 0 2259913..2260617 + 234 170684216 aat EcSMS35_2236 - leucyl/phenylalanyl-tRNA--protein transferase 2170 48.40 0 2260902..2261120 + 72 170681224 infA EcSMS35_2237 - translation initiation factor IF-1 2171 48.28 0 2261611..2262453 - 280 170681767 - EcSMS35_2239 - hypothetical protein 2172 48.99 0 2262538..2262735 - 65 170679924 - EcSMS35_2240 - hypothetical protein 2173 53.78 0 2262752..2263240 - 162 170680332 - EcSMS35_2241 - hypothetical protein 2174 53.65 0 2263237..2263620 - 127 170680461 - EcSMS35_2242 - hypothetical protein 2175 56.44 +1 2263697..2264185 - 162 170683765 - EcSMS35_2243 - YagB/YeeU/YfjZ family protein 2176 56.73 +1 2264088..2264771 - 227 170682073 - EcSMS35_2244 - hypothetical protein 2177 53.60 0 2264790..2265011 - 73 170682030 - EcSMS35_2245 - hypothetical protein 2178 58.28 +1 2265074..2265550 - 158 170682543 - EcSMS35_2246 - RadC family DNA repair protein 2179 55.35 0 2265566..2266051 - 161 170681272 - EcSMS35_2247 - antirestriction protein 2180 56.17 +1 2266143..2266961 - 272 170679807 - EcSMS35_2248 - hypothetical protein 2181 57.50 +1 2267288..2270134 - 948 170680707 flu1 EcSMS35_2249 - antigen 43 2182 44.74 -1 2270145..2270258 - 37 170683526 - EcSMS35_2250 - hypothetical protein 2183 57.96 +1 2270506..2271378 - 290 170683241 - EcSMS35_2251 - putative GTPase 2184 45.93 0 2271642..2273213 + 523 170682082 hsdM EcSMS35_2253 - type I restriction-modification system, M subunit 2185 55.36 0 2273207..2273710 - 167 170682442 - EcSMS35_2252 - IS1 transposase orfB 2186 50.23 0 2273721..2273933 - 70 170680370 - EcSMS35_2254 - IS1 transposase orfA 2187 39.14 -2 2274063..2276285 - 740 170682772 - EcSMS35_2255 - glycosyl transferase, group 1/glycosyl transferase, group 2 2188 35.43 -2 2276383..2277192 + 269 170681060 - EcSMS35_2256 - hypothetical protein 2189 55.19 0 2278306..2279298 + 330 170680700 - EcSMS35_2257 - IS5 transposase 2190 53.87 0 2279746..2280636 - 296 170684064 - EcSMS35_2258 - IS629 transposase orfB 2191 53.82 0 2280633..2280959 - 108 170682322 - EcSMS35_2259 - IS629 transposase orfA 2192 53.79 0 2282078..2283001 - 307 170681490 - EcSMS35_2261 - IS903 transposase 2193 44.96 -1 2283048..2284208 - 386 170681557 - EcSMS35_2262 - glycosyl transferase, group 2 2194 41.09 -1 2284330..2285463 - 377 170679591 - EcSMS35_2263 - glycosyl transferase, group 1 family protein 2195 40.29 -1 2285476..2286366 - 296 170680732 - EcSMS35_2264 - glycosyl transferase, group 2 family protein 2196 44.42 -1 2286363..2287517 - 384 170680099 glf EcSMS35_2265 - UDP-galactopyranose mutase 2197 39.20 -2 2287536..2289428 - 630 170679598 - EcSMS35_2266 - glycosyl transferase family protein 2198 45.48 0 2289443..2290183 - 246 170680867 rfbB EcSMS35_2267 - O-antigen export system ATP-binding protein RfbB 2199 36.67 -2 2290183..2290962 - 259 170682573 - EcSMS35_2268 - O-antigen export system permease protein RfbA 2200 42.03 -1 2291713..2291850 + 45 170682081 - EcSMS35_2269 - hypothetical protein 2201 57.58 +1 2292197..2292328 + 43 170684057 - EcSMS35_2270 - hypothetical protein 2202 47.71 0 2292408..2292560 + 50 170680531 - EcSMS35_2271 - hypothetical protein 2203 52.16 0 2292586..2294205 + 539 170679893 - EcSMS35_2272 - ISL3 family transposase 2204 44.86 -1 2295950..2296513 - 187 170682560 - EcSMS35_2274 - hypothetical protein 2205 36.35 -2 2297723..2299546 - 607 170682832 - EcSMS35_2275 - hypothetical protein 2206 43.10 -1 2299911..2301476 + 521 170682431 - EcSMS35_2276 - hypothetical protein 2207 48.64 0 2301700..2302908 - 402 170680457 - EcSMS35_2277 - phage integrase family site specific recombinase 2208 52.83 0 2303366..2305642 - 758 170679955 clpA EcSMS35_2278 - ATP-dependent Clp protease ATP-binding subunit ClpA 2209 45.17 0 2305673..2305993 - 106 170683903 clpS EcSMS35_2279 - ATP-dependent Clp protease adaptor protein ClpS 2210 48.44 0 2306316..2306540 + 74 170683368 cspD EcSMS35_2280 - cold shock domain-containing protein CspD 2211 54.13 0 2306613..2308559 - 648 170683653 macB EcSMS35_2281 - macrolide-specific ABC-type efflux carrier protein MacB 2212 53.41 0 2308556..2309671 - 371 170683052 macA EcSMS35_2282 - macrolide-specific efflux protein MacA 2213 49.95 0 2309786..2310778 + 330 170680310 - EcSMS35_2284 - hypothetical protein 2214 53.16 0 2310775..2312433 - 552 170682448 - EcSMS35_2283 - hypothetical protein 2215 52.44 0 2312859..2313554 + 231 170684199 aqpZ EcSMS35_2285 - aquaporin Z 2216 49.32 0 2314068..2315093 - 341 170682362 - EcSMS35_2286 - IS110 family transposase 2217 53.16 0 2315324..2316271 - 315 170680883 dusC EcSMS35_2287 - tRNA-dihydrouridine synthase C 2218 49.12 0 2316510..2316908 + 132 170681362 - EcSMS35_2288 - LrgA family protein 2219 53.02 0 2316905..2317600 + 231 170679809 - EcSMS35_2289 - LrgB family protein 2220 54.35 0 2317730..2318614 + 294 170680352 cdd EcSMS35_2290 - cytidine deaminase 2221 48.47 0 2318764..2319483 + 239 170683493 sanA EcSMS35_2291 - protein SanA 2222 43.33 -1 2319486..2319725 + 79 170684176 - EcSMS35_2292 - hypothetical protein 2223 51.33 0 2319919..2321157 + 412 170683988 - EcSMS35_2293 - pyridine nucleotide-disulfide oxidoreductase 2224 50.57 0 2321151..2322386 + 411 170682869 - EcSMS35_2294 - dihydroorotate dehydrogenase family protein 2225 50.15 0 2322457..2323467 - 336 170680415 mglC EcSMS35_2295 - galactose ABC transporter, permease protein 2226 45.04 0 2323483..2325003 - 506 170679772 mglA EcSMS35_2296 - galactose ABC transporter, ATP-binding protein 2227 51.15 0 2325064..2326062 - 332 170680313 mglB EcSMS35_2297 - galactose ABC transporter, periplasmic galactose-binding protein 2228 51.68 0 2326342..2327382 - 346 170679819 galS EcSMS35_2298 - transcriptional regulator GalS 2229 53.97 0 2327524..2328681 - 385 170681337 - EcSMS35_2299 - hypothetical protein 2230 50.82 0 2328698..2329366 - 222 170680773 folE EcSMS35_2300 - GTP cyclohydrolase I 2231 54.96 0 2329623..2330459 + 278 170682901 fghA1 EcSMS35_2301 - S-formylglutathione hydrolase 2232 52.96 0 2330491..2332416 - 641 170682371 cirA EcSMS35_2302 - colicin I receptor 2233 53.40 0 2332774..2334243 - 489 170679799 lysP EcSMS35_2303 - lysine-specific permease 2234 53.97 0 2334448..2335329 - 293 170682677 - EcSMS35_2304 - LysR family transcriptional regulator 2235 52.76 0 2335428..2336477 + 349 170681096 - EcSMS35_2305 - hypothetical protein 2236 52.21 0 2336551..2337408 + 285 170681734 nfo EcSMS35_2306 - endonuclease 4 2237 51.79 0 2337411..2338499 + 362 170683507 - EcSMS35_2307 - PfkB family kinase 2238 51.08 0 2338555..2339805 - 416 170684054 - EcSMS35_2308 - NupC family nucleoside transporter 2239 51.70 0 2339905..2340846 - 313 170683370 - EcSMS35_2309 - inosine-uridine preferring nucleoside hydrolase family protein 2240 43.35 -1 2340976..2341674 + 232 170683945 nsr EcSMS35_2310 - regulatory protein Nsr 2241 50.76 0 2341742..2342992 - 416 170681919 - EcSMS35_2311 - NupC family nucleoside transporter 2242 48.56 0 2343086..2344024 - 312 170682601 - EcSMS35_2312 - indigoidine synthase A like protein 2243 47.13 0 2344012..2344953 - 313 170680599 - EcSMS35_2313 - kinase, pfkB family protein 2244 56.03 +1 2345377..2347068 - 563 170681268 fruA EcSMS35_2314 - PTS system, fructose-specific, IIBC component 2245 53.89 0 2347085..2348023 - 312 170681800 fruK EcSMS35_2315 - 1-phosphofructokinase 2246 55.53 0 2348023..2349153 - 376 170683388 fruB EcSMS35_2316 - PTS system fructose-specific phosphotransferase enzyme IIA component 2247 40.15 -1 2349319..2349450 + 43 170683990 - EcSMS35_2317 - hypothetical protein 2248 52.79 0 2349521..2350702 + 393 170680537 setB EcSMS35_2319 - sugar efflux transporter B 2249 55.69 0 2350699..2350953 - 84 170679926 - EcSMS35_2318 - hypothetical protein 2250 49.56 0 2351108..2351680 + 190 170681704 - EcSMS35_2320 - elongation factor P family protein 2251 51.87 0 2351903..2353369 + 488 170680151 - EcSMS35_2321 - mannitol dehydrogenase family protein 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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