version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2096 53.48 0 2167505..2168581 + 358 170681860 ompA EcSMS35_2163 - outer membrane protein A 2097 46.36 0 2168657..2169109 - 150 170681213 - EcSMS35_2164 - hypothetical protein 2098 51.73 0 2169295..2171055 + 586 170679870 - EcSMS35_2165 - S16 family peptidase 2099 52.79 0 2171124..2171642 + 172 170681567 fabA EcSMS35_2166 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 2100 51.95 0 2172135..2172698 - 187 170682434 - EcSMS35_2167 - putative lipoprotein 2101 49.91 0 2172695..2174335 - 546 170683101 pqiB EcSMS35_2168 - paraquat-inducible protein B 2102 51.99 0 2174340..2175593 - 417 170680788 pqiA EcSMS35_2169 - paraquat-inducible protein A 2103 52.73 0 2175723..2177630 - 635 170681436 uup EcSMS35_2170 - ABC transporter, ATP-binding protein 2104 54.53 0 2177642..2179750 - 702 170683350 - EcSMS35_2171 - RNA methylase family protein 2105 50.27 0 2179848..2180957 + 369 170682018 - EcSMS35_2173 - MOSC domain-containing protein 2106 48.99 0 2180954..2181496 - 180 170683889 - EcSMS35_2172 - hypothetical protein 2107 46.79 0 2181670..2182680 - 336 170682541 pyrD EcSMS35_2174 - dihydroorotate oxidase 2108 50.87 0 2182791..2183480 - 229 170681882 - EcSMS35_2175 - periplasmic pilus chaperone family protein 2109 47.76 0 2183494..2184006 - 170 170682280 - EcSMS35_2176 - fimbrial protein 2110 47.24 0 2184017..2184469 - 150 170683162 - EcSMS35_2177 - fimbrial protein 2111 47.62 0 2184571..2185641 - 356 170683719 - EcSMS35_2178 - putative fimbrial protein 2112 47.60 0 2185632..2188232 - 866 170682116 - EcSMS35_2179 - outer membrane usher protein fimD-like protein 2113 46.67 0 2188257..2188931 - 224 170682796 - EcSMS35_2180 - periplasmic pilus chaperone family protein 2114 41.48 -1 2189039..2189578 - 179 170679821 - EcSMS35_2181 - putative fimbrial protein 2115 54.51 0 2189933..2190508 + 191 170680312 - EcSMS35_2182 - NADPH-dependent FMN reductase 2116 53.02 0 2190501..2191460 + 319 170683457 - EcSMS35_2183 - aliphatic sulfonate ABC transporter periplasmic substrate-binding protein 2117 57.07 +1 2191457..2192602 + 381 170680263 ssuD EcSMS35_2184 - alkanesulfonate monooxygenase, FMNH(2)-dependent 2118 55.47 0 2192611..2193405 + 264 170683085 - EcSMS35_2185 - putative sulfonate ABC transporter, permease protein 2119 54.82 0 2193402..2194169 + 255 170683607 - EcSMS35_2186 - ABC transporter, ATP-binding protein 2120 54.50 0 2194212..2196824 - 870 170683651 pepN EcSMS35_2187 - aminopeptidase N 2121 41.46 -1 2196860..2196982 - 40 170684174 - EcSMS35_2188 - hypothetical protein 2122 51.37 0 2197090..2198292 + 400 170682315 pncB EcSMS35_2189 - nicotinate phosphoribosyltransferase 2123 52.75 0 2198460..2199860 + 466 170682866 asnS EcSMS35_2190 - asparagine tRNA synthetase 2124 49.35 0 2200462..2201535 + 357 170682361 ompF EcSMS35_2191 - outer membrane protein F 2125 52.39 0 2201720..2202910 + 396 170682145 aspC EcSMS35_2192 - aspartate transaminase 2126 52.16 0 2202960..2203607 - 215 170680350 - EcSMS35_2193 - metallo-beta-lactamase family protein 2127 50.27 0 2203634..2204182 - 182 170680996 - EcSMS35_2194 - Tat pathway signal sequence domain-containing protein 2128 53.30 0 2204363..2206210 - 615 170683737 - EcSMS35_2195 - peptidoglycan binding domain-containing protein 2129 56.06 +1 2206471..2210931 - 1486 170679712 mukB EcSMS35_2196 - chromosome partition protein MukB 2130 52.20 0 2210931..2211635 - 234 170683700 mukE EcSMS35_2197 - chromosome partition protein MukE 2131 52.91 0 2211616..2212938 - 440 170679667 mukF EcSMS35_2198 - chromosome partition protein MukF 2132 51.91 0 2212935..2213720 - 261 170683604 smtA EcSMS35_2199 - SmtA protein 2133 52.31 0 2213856..2214635 + 259 170681104 - EcSMS35_2201 - hypothetical protein 2134 52.24 0 2214612..2215505 - 297 170684302 - EcSMS35_2200 - hypothetical protein 2135 53.15 0 2215659..2216405 - 248 170681729 kdsB EcSMS35_2202 - 3-deoxy-D-manno-octulosonate cytidylyltransferase 2136 48.09 0 2216402..2216584 - 60 170680062 - EcSMS35_2203 - hypothetical protein 2137 52.39 0 2216636..2217868 - 410 170680727 - EcSMS35_2204 - hypothetical protein 2138 54.91 0 2217905..2218891 - 328 170683237 lpxK EcSMS35_2205 - tetraacyldisaccharide 4'-kinase 2139 50.94 0 2218888..2220636 - 582 170680104 msbA EcSMS35_2206 - lipid A export permease/ATP-binding protein MsbA 2140 49.98 0 2220673..2222937 - 754 170683776 - EcSMS35_2207 - DNA internalization-related competence protein ComEC/Rec2 2141 49.12 0 2223143..2223427 - 94 170683232 ihfB EcSMS35_2208 - integration host factor, beta subunit 2142 51.14 0 2223587..2225260 - 557 170682691 rpsA EcSMS35_2209 - ribosomal protein S1 2143 54.24 0 2225371..2226054 - 227 170682193 cmk EcSMS35_2210 - cytidylate kinase 2144 50.07 0 2226227..2226991 - 254 170680466 - EcSMS35_2211 - M48B family peptidase 2145 53.80 0 2227127..2228455 - 442 170679985 - EcSMS35_2212 - IS4 transposase 2146 50.16 0 2228599..2229882 - 427 170683917 aroA EcSMS35_2213 - 3-phosphoshikimate 1-carboxyvinyltransferase 2147 50.69 0 2229953..2231041 - 362 170683386 serC EcSMS35_2214 - phosphoserine aminotransferase 2148 48.34 0 2231240..2231932 - 230 170682197 - EcSMS35_2215 - hypothetical protein 2149 50.20 0 2232062..2233822 + 586 170683951 - EcSMS35_2216 - hypothetical protein 2150 48.60 0 2234228..2235085 + 285 170680084 - EcSMS35_2217 - putative formate transporter FocA 2151 51.34 0 2235140..2237422 + 760 170681780 pflB2 EcSMS35_2218 - formate acetyltransferase 2152 49.53 0 2237614..2238354 + 246 170681252 pflA EcSMS35_2219 - pyruvate formate-lyase 1-activating enzyme 2153 48.15 0 2238564..2239994 - 476 170680872 - EcSMS35_2220 - amino acid permease family protein 2154 52.22 0 2240204..2241352 - 382 170682710 - EcSMS35_2221 - major facilitator family transporter 2155 41.09 -1 2241383..2241511 + 42 170682202 - EcSMS35_2222 - hypothetical protein 2156 45.77 0 2241667..2242293 + 208 170684157 - EcSMS35_2223 - isochorismatase family protein 2157 54.40 0 2242329..2243192 - 287 170683650 dmsC1 EcSMS35_2224 - anaerobic dimethyl sulfoxide reductase, C subunit 2158 52.27 0 2243194..2243811 - 205 170680702 dmsB_2 EcSMS35_2225 - dimethylsulfoxide reductase, B subunit 2159 52.19 0 2243822..2246266 - 814 170680161 dmsA EcSMS35_2226 - anaerobic dimethyl sulfoxide reductase, A subunit 2160 52.90 0 2246505..2247797 - 430 170683015 serS EcSMS35_2227 - seryl-tRNA synthetase 2161 53.42 0 2247888..2249231 - 447 170682500 - EcSMS35_2228 - putative DNA recombination-associated ATPase RarA 2162 51.14 0 2249242..2249853 - 203 170684020 lolA EcSMS35_2229 - outer membrane lipoprotein carrier protein LolA 2163 54.14 0 2250012..2254121 - 1369 170683476 ftsK EcSMS35_2230 - DNA translocase FtsK 2164 48.08 0 2254256..2254750 - 164 170679860 lrp EcSMS35_2231 - leucine responsive regulatory protein 2165 38.60 -2 2255113..2255226 - 37 170681503 - EcSMS35_2232 - hypothetical protein 2166 53.21 0 2255295..2256260 + 321 170680886 trxB EcSMS35_2233 - thioredoxin-disulfide reductase 2167 53.08 0 2256383..2258149 + 588 170682589 cydD EcSMS35_2234 - cysteine ABC transporter permease/ATP-binding protein 2168 53.60 0 2258150..2259871 + 573 170682378 cudC EcSMS35_2235 - cysteine ABC transporter permease/ATP-binding protein 2169 53.76 0 2259913..2260617 + 234 170684216 aat EcSMS35_2236 - leucyl/phenylalanyl-tRNA--protein transferase 2170 48.40 0 2260902..2261120 + 72 170681224 infA EcSMS35_2237 - translation initiation factor IF-1 2171 48.28 0 2261611..2262453 - 280 170681767 - EcSMS35_2239 - hypothetical protein 2172 48.99 0 2262538..2262735 - 65 170679924 - EcSMS35_2240 - hypothetical protein 2173 53.78 0 2262752..2263240 - 162 170680332 - EcSMS35_2241 - hypothetical protein 2174 53.65 0 2263237..2263620 - 127 170680461 - EcSMS35_2242 - hypothetical protein 2175 56.44 +1 2263697..2264185 - 162 170683765 - EcSMS35_2243 - YagB/YeeU/YfjZ family protein 2176 56.73 +1 2264088..2264771 - 227 170682073 - EcSMS35_2244 - hypothetical protein 2177 53.60 0 2264790..2265011 - 73 170682030 - EcSMS35_2245 - hypothetical protein 2178 58.28 +1 2265074..2265550 - 158 170682543 - EcSMS35_2246 - RadC family DNA repair protein 2179 55.35 0 2265566..2266051 - 161 170681272 - EcSMS35_2247 - antirestriction protein 2180 56.17 +1 2266143..2266961 - 272 170679807 - EcSMS35_2248 - hypothetical protein 2181 57.50 +1 2267288..2270134 - 948 170680707 flu1 EcSMS35_2249 - antigen 43 2182 44.74 -1 2270145..2270258 - 37 170683526 - EcSMS35_2250 - hypothetical protein 2183 57.96 +1 2270506..2271378 - 290 170683241 - EcSMS35_2251 - putative GTPase 2184 45.93 0 2271642..2273213 + 523 170682082 hsdM EcSMS35_2253 - type I restriction-modification system, M subunit 2185 55.36 0 2273207..2273710 - 167 170682442 - EcSMS35_2252 - IS1 transposase orfB 2186 50.23 0 2273721..2273933 - 70 170680370 - EcSMS35_2254 - IS1 transposase orfA 2187 39.14 -2 2274063..2276285 - 740 170682772 - EcSMS35_2255 - glycosyl transferase, group 1/glycosyl transferase, group 2 2188 35.43 -2 2276383..2277192 + 269 170681060 - EcSMS35_2256 - hypothetical protein 2189 55.19 0 2278306..2279298 + 330 170680700 - EcSMS35_2257 - IS5 transposase 2190 53.87 0 2279746..2280636 - 296 170684064 - EcSMS35_2258 - IS629 transposase orfB 2191 53.82 0 2280633..2280959 - 108 170682322 - EcSMS35_2259 - IS629 transposase orfA 2192 53.79 0 2282078..2283001 - 307 170681490 - EcSMS35_2261 - IS903 transposase 2193 44.96 -1 2283048..2284208 - 386 170681557 - EcSMS35_2262 - glycosyl transferase, group 2 2194 41.09 -1 2284330..2285463 - 377 170679591 - EcSMS35_2263 - glycosyl transferase, group 1 family protein 2195 40.29 -1 2285476..2286366 - 296 170680732 - EcSMS35_2264 - glycosyl transferase, group 2 family protein 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.