version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2008 48.91 0 2088176..2088817 + 213 170679945 - EcSMS35_2073 - nickel-dependent hydrogenase b-type cytochrome subunit 2009 46.53 0 2088821..2089396 + 191 170680452 yceI EcSMS35_2074 - YceI protein 2010 49.19 0 2089438..2090490 - 350 170680794 - EcSMS35_2075 - rhodanese domain-containing protein 2011 52.55 0 2090715..2091635 + 306 170681218 lpxL EcSMS35_2076 - lipid A biosynthesis lauroyl acyltransferase 2012 52.16 0 2091807..2093033 + 408 170679802 mdtG EcSMS35_2077 - multidrug resistance protein MdtG 2013 50.93 0 2093116..2093490 + 124 170680181 msyB EcSMS35_2078 - acidic protein MsyB 2014 50.44 0 2093491..2093718 - 75 170683455 - EcSMS35_2079 - putative lipoprotein 2015 54.85 0 2093891..2096404 - 837 170684144 mdoH EcSMS35_2080 - glucans biosynthesis glucosyltransferase H 2016 49.68 0 2096427..2097980 - 517 170682373 mdoG EcSMS35_2081 - glucans biosynthesis protein G 2017 48.48 0 2098033..2098164 + 43 170682926 - EcSMS35_2082 - hypothetical protein 2018 47.92 0 2098168..2098311 + 47 170683681 - EcSMS35_2083 - hypothetical protein 2019 44.21 -1 2098356..2099513 + 385 170684209 mdoC EcSMS35_2084 - glucans biosynthesis protein C 2020 50.70 0 2099521..2100942 - 473 170682775 - EcSMS35_2085 - phopholipase D 2021 51.50 0 2100944..2101477 - 177 170681971 - EcSMS35_2086 - appr-1-p processing domain-containing protein 2022 42.31 -1 2101572..2101727 - 51 170683875 - EcSMS35_2087 - hypothetical protein 2023 43.54 -1 2102004..2102336 - 110 170683039 csgC EcSMS35_2088 - curli production protein CsgC 2024 51.32 0 2102394..2102849 - 151 170679882 csgA EcSMS35_2089 - major curlin protein CsgA 2025 42.44 -1 2102890..2103372 - 160 170684268 csgB EcSMS35_2090 - minor curlin protein CsgB 2026 34.95 -2 2103448..2103633 + 61 170681225 - EcSMS35_2091 - hypothetical protein 2027 40.91 -1 2103986..2104117 - 43 170680210 - EcSMS35_2092 - hypothetical protein 2028 42.93 -1 2104178..2104750 + 190 170682157 csgD EcSMS35_2093 - transcriptional regulator CsgD 2029 42.82 -1 2104755..2105144 + 129 170681334 csgE EcSMS35_2094 - curli production assembly/transport subunit CsgE 2030 42.21 -1 2105169..2105585 + 138 170680050 csgF EcSMS35_2095 - curli production assembly/transport component CsgF 2031 50.12 0 2105612..2106445 + 277 170684167 csgG EcSMS35_2096 - curli production assembly/transport subunit CsgG 2032 54.21 0 2106509..2107030 - 173 170680973 - EcSMS35_2097 - hypothetical protein 2033 53.33 0 2107102..2107656 - 184 170680426 - EcSMS35_2098 - chaperone TorD 2034 47.97 0 2107680..2108417 - 245 170682055 - EcSMS35_2099 - phosphotransferase domain-containing protein 2035 51.01 0 2108472..2109410 - 312 170682399 - EcSMS35_2100 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 2036 43.09 -1 2109823..2110509 - 228 170684239 - EcSMS35_2102 - hypothetical protein 2037 51.55 0 2111072..2112136 - 354 170683480 phoH EcSMS35_2103 - protein phoH 2038 54.09 0 2112481..2113752 - 423 170680570 - EcSMS35_2104 - Tat-translocated enzyme 2039 51.24 0 2113758..2114885 - 375 170682015 - EcSMS35_2105 - hypothetical protein 2040 54.75 0 2114943..2115773 - 276 170683993 - EcSMS35_2106 - iron permease FTR1 family protein 2041 31.78 -2 2115809..2115937 + 42 170683305 - EcSMS35_2107 - hypothetical protein 2042 54.27 0 2115993..2117501 - 502 170682638 putP EcSMS35_2108 - sodium/proline symporter 2043 45.65 0 2117491..2117628 - 45 170681977 - EcSMS35_2109 - hypothetical protein 2044 35.71 -2 2117660..2117869 - 69 170681915 - EcSMS35_2110 - hypothetical protein 2045 56.32 +1 2117924..2121886 + 1320 170681102 putA EcSMS35_2111 - bifunctional protein PutA 2046 50.39 0 2121926..2122564 - 212 170680576 rutR EcSMS35_2112 - transcriptional regulator RutR 2047 55.13 0 2122852..2123943 + 363 170680078 - EcSMS35_2113 - putative monooxygenase rutA 2048 55.32 0 2123940..2124635 + 231 170683118 - EcSMS35_2114 - putative isochorismatase family protein, rutB 2049 53.75 0 2124647..2125033 + 128 170680387 - EcSMS35_2115 - rutC protein 2050 57.81 +1 2125041..2125853 + 270 170681429 - EcSMS35_2116 - putative rutD protein 2051 57.02 +1 2125850..2126440 + 196 170681978 - EcSMS35_2117 - putative rutE protein 2052 58.99 +1 2126451..2126945 + 164 170680483 - EcSMS35_2118 - putative flavin reductase rutF 2053 54.03 0 2126966..2128294 + 442 170680995 - EcSMS35_2119 - putative purine permease ycdG 2054 54.10 0 2128923..2129519 + 198 170684184 wrbA EcSMS35_2120 - NAD(P)H:quinone oxidoreductase, type IV 2055 47.81 0 2129540..2129767 + 75 170679966 - EcSMS35_2121 - hypothetical protein 2056 51.93 0 2129805..2131046 - 413 170683233 agp EcSMS35_2122 - glucose-1-phosphatase 2057 35.01 -2 2131339..2132175 - 278 170683642 - EcSMS35_2123 - hypothetical protein 2058 52.99 0 2132855..2133775 + 306 170682205 cbpA EcSMS35_2124 - curved DNA-binding protein 2059 53.59 0 2133775..2134080 + 101 170682744 cbpM EcSMS35_2125 - chaperone-modulator protein CbpM 2060 52.50 0 2134232..2134831 - 199 170680043 torD EcSMS35_2126 - chaperone protein TorD 2061 55.05 0 2134828..2137374 - 848 170684290 torA EcSMS35_2127 - trimethylamine-N-oxide reductase 2062 50.98 0 2137374..2138546 - 390 170680538 torC EcSMS35_2128 - cytochrome c-type protein torC 2063 53.25 0 2138676..2139368 + 230 170682155 torR EcSMS35_2130 - torCAD operon transcriptional regulatory protein TorR 2064 53.64 0 2139341..2140369 - 342 170680014 torT EcSMS35_2129 - periplasmic protein TorT 2065 54.24 0 2140482..2143184 + 900 170681062 torS EcSMS35_2131 - TMAO reductase system sensor TorS 2066 49.07 0 2143267..2144340 + 357 170682733 - EcSMS35_2132 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2067 40.23 -1 2144389..2144562 - 57 170682144 - EcSMS35_2133 - GnsA/GnsB family transcriptional regulator 2068 45.00 -1 2144757..2144876 - 39 170683755 - EcSMS35_2134 - hypothetical protein 2069 43.66 -1 2144956..2145168 - 70 170683191 - EcSMS35_2135 - cold shock DNA-binding protein 2070 48.36 0 2145454..2145666 + 70 170684041 cspH EcSMS35_2137 - cold-shock DNA-binding domain-containing protein CspH 2071 53.39 0 2145654..2146964 - 436 170682176 appA EcSMS35_2136 - periplasmic AppA protein 2072 53.03 0 2147149..2148285 - 378 170683524 appB EcSMS35_2138 - cytochrome bd-II oxidase, subunit II 2073 53.72 0 2148297..2149841 - 514 170680621 appC EcSMS35_2139 - cytochrome bd-II oxidase, subunit I 2074 55.13 0 2149975..2150832 - 285 170681914 hyaF EcSMS35_2140 - hydrogenase-1 operon protein HyaF 2075 55.64 0 2150829..2151227 - 132 170681401 hyaE EcSMS35_2141 - hydrogenase-1 expression protein HyaE 2076 58.16 +1 2151224..2151811 - 195 170680751 hyaD EcSMS35_2142 - hydrogenase 1 maturation peptidase HyaD 2077 51.69 0 2151808..2152515 - 235 170682734 hyaC EcSMS35_2143 - Ni/Fe-hydrogenase 1 B-type cytochrome subunit HyaC 2078 56.41 +1 2152534..2154327 - 597 170683907 hyaB EcSMS35_2144 - nickel-dependent hydrogenase 1, large subunit 2079 56.12 +1 2154324..2155442 - 372 170683371 hyaA EcSMS35_2145 - nickel-dependent hydrogenase 1, small subunit 2080 40.38 -1 2155643..2155855 + 70 170681433 - EcSMS35_2146 - hypothetical protein 2081 51.21 0 2156163..2156822 + 219 170680785 - EcSMS35_2148 - hypothetical protein 2082 46.97 0 2156914..2157243 + 109 170682067 tusE EcSMS35_2150 - sulfurtransferase tusE 2083 52.33 0 2157240..2157518 - 92 170683766 - EcSMS35_2149 - acylphosphatase 2084 51.89 0 2157613..2158803 + 396 170680438 - EcSMS35_2151 - hypothetical protein 2085 55.97 0 2158861..2159178 + 105 170679789 - EcSMS35_2152 - hemimethylated DNA-binding protein 2086 54.11 0 2159223..2159636 - 137 170681410 - EcSMS35_2153 - putative CoA-binding protein 2087 36.26 -2 2159599..2159769 + 56 170680754 - EcSMS35_2154 - hypothetical protein 2088 50.23 0 2159809..2160471 + 220 170683084 - EcSMS35_2155 - hypothetical protein 2089 52.07 0 2160568..2161026 + 152 170682419 mgsA EcSMS35_2156 - methylglyoxal synthase 2090 52.75 0 2161058..2163112 - 684 170681833 helD EcSMS35_2157 - helicase IV 2091 48.55 0 2163235..2163681 + 148 170681332 - EcSMS35_2158 - hypothetical protein 2092 52.47 0 2163691..2165853 + 720 170679898 - EcSMS35_2160 - hypothetical protein 2093 47.78 0 2165816..2166445 - 209 170680490 - EcSMS35_2159 - TfoX family protein 2094 48.24 0 2166664..2167173 + 169 170683735 sulA EcSMS35_2162 - cell division inhibitor SulA 2095 36.84 -2 2167157..2167327 - 56 170682049 - EcSMS35_2161 - hypothetical protein 2096 53.48 0 2167505..2168581 + 358 170681860 ompA EcSMS35_2163 - outer membrane protein A 2097 46.36 0 2168657..2169109 - 150 170681213 - EcSMS35_2164 - hypothetical protein 2098 51.73 0 2169295..2171055 + 586 170679870 - EcSMS35_2165 - S16 family peptidase 2099 52.79 0 2171124..2171642 + 172 170681567 fabA EcSMS35_2166 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 2100 51.95 0 2172135..2172698 - 187 170682434 - EcSMS35_2167 - putative lipoprotein 2101 49.91 0 2172695..2174335 - 546 170683101 pqiB EcSMS35_2168 - paraquat-inducible protein B 2102 51.99 0 2174340..2175593 - 417 170680788 pqiA EcSMS35_2169 - paraquat-inducible protein A 2103 52.73 0 2175723..2177630 - 635 170681436 uup EcSMS35_2170 - ABC transporter, ATP-binding protein 2104 54.53 0 2177642..2179750 - 702 170683350 - EcSMS35_2171 - RNA methylase family protein 2105 50.27 0 2179848..2180957 + 369 170682018 - EcSMS35_2173 - MOSC domain-containing protein 2106 48.99 0 2180954..2181496 - 180 170683889 - EcSMS35_2172 - hypothetical protein 2107 46.79 0 2181670..2182680 - 336 170682541 pyrD EcSMS35_2174 - dihydroorotate oxidase 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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