version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 157 49.22 0 171187..171891 - 234 170682246 sfsA EcSMS35_0157 - sugar fermentation stimulation protein 158 55.56 0 171906..172436 - 176 170684250 ligT EcSMS35_0158 - 2'-5' RNA ligase 159 56.97 +1 172465..174939 + 824 170681199 hrpB EcSMS35_0159 - ATP-dependent helicase HrpB 160 55.35 0 175033..177567 + 844 170683049 mrcB EcSMS35_0160 - penicillin-binding protein 1B 161 38.52 -2 177632..177766 - 44 170679586 - EcSMS35_0161 - hypothetical protein 162 51.04 0 177787..180045 + 752 170681393 fhuA EcSMS35_0162 - ferrichrome-iron receptor FhuA 163 56.64 +1 180096..180893 + 265 170682356 fhuC EcSMS35_0163 - ferrichrome transport ATP-binding protein FhuC 164 54.43 0 180893..181783 + 296 170684223 fhuD EcSMS35_0164 - ferrichrome-binding periplasmic protein FhuD 165 59.51 +1 181780..183762 + 660 170683245 fhuB EcSMS35_0165 - ferrichrome ABC transporter, permease protein FhuB 166 55.43 0 183797..185077 - 426 170680366 hemL EcSMS35_0166 - glutamate-1-semialdehyde-2,1-aminomutase 167 53.38 0 185302..186723 + 473 170682657 clcA EcSMS35_0167 - H(+)/Cl(-) exchange transporter ClcA 168 50.43 0 186805..187149 + 114 170682180 yadR EcSMS35_0168 - iron-sulfur cluster assembly accessory protein YadR 169 53.37 0 187196..187819 - 207 170681649 - EcSMS35_0169 - hypothetical protein 170 52.81 0 187857..188657 - 266 170681038 btuF EcSMS35_0170 - cobalamin ABC transporter, periplasmic cobalamin-binding protein 171 53.22 0 188650..189348 - 232 170681375 mtnN EcSMS35_0171 - MTA/SAH nucleosidase 172 47.56 0 189432..190949 + 505 170681908 dgt EcSMS35_0172 - deoxyguanosinetriphosphate triphosphohydrolase 173 53.96 0 191079..192503 + 474 170680398 degP EcSMS35_0173 - protease Do 174 53.11 0 192658..193815 + 385 170679721 cdaR EcSMS35_0174 - carbohydrate diacid regulator 175 44.70 -1 193869..194255 - 128 170683939 - EcSMS35_0175 - hypothetical protein 176 52.73 0 194570..195394 - 274 170682872 dapD EcSMS35_0176 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 177 53.76 0 195425..198097 - 890 170683624 glnD EcSMS35_0177 - protein-P-II uridylyltransferase 178 50.57 0 198159..198953 - 264 170684311 map EcSMS35_0178 - methionine aminopeptidase, type I 179 51.24 0 199321..200046 + 241 170679652 rpsB EcSMS35_0180 - ribosomal protein S2 180 50.91 0 199998..200162 - 54 170681918 - EcSMS35_0179 - hypothetical protein 181 49.65 0 200181..201032 + 283 170681184 tsf EcSMS35_0181 - translation elongation factor Ts 182 53.31 0 201179..201904 + 241 170681680 pyrH EcSMS35_0182 - UMP kinase 183 50.90 0 202054..202611 + 185 170683322 frr EcSMS35_0183 - ribosome releasing factor 184 52.63 0 202703..203899 + 398 170683853 dxr EcSMS35_0184 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 185 49.61 0 204085..204846 + 253 170681254 uppS EcSMS35_0185 - di-trans,poly-cis-decaprenylcistransferase 186 50.47 0 204859..205716 + 285 170682588 cdsA1 EcSMS35_0186 - phosphatidate cytidylyltransferase 187 50.78 0 205728..207080 + 450 170683080 rseP EcSMS35_0187 - RIP metalloprotease RseP 188 50.23 0 207110..209542 + 810 170683955 yaeT EcSMS35_0188 - outer membrane protein assembly complex, YaeT protein 189 48.97 0 209664..210149 + 161 170683286 skp EcSMS35_0189 - chaperone protein Skp 190 52.53 0 210153..211178 + 341 170683962 lpxD EcSMS35_0190 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 191 50.66 0 211283..211738 + 151 170680401 fabZ EcSMS35_0191 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 192 53.36 0 211742..212530 + 262 170679946 lpxA EcSMS35_0192 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 193 54.22 0 212530..213678 + 382 170681777 lpxB EcSMS35_0193 - lipid-A-disaccharide synthase 194 55.44 0 213675..214271 + 198 170680885 rnhB EcSMS35_0194 - ribonuclease HII 195 55.07 0 214308..217790 + 1160 170682325 dnaE EcSMS35_0195 - DNA polymerase III, alpha subunit 196 52.60 0 217803..218762 + 319 170682858 accA EcSMS35_0196 - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 197 51.26 0 218861..221002 + 713 170683659 ldcC1 EcSMS35_0197 - lysine decarboxylase, constitutive 198 51.03 0 221059..221448 + 129 170684191 - EcSMS35_0198 - glyoxylase family protein 199 58.04 +1 221513..222811 + 432 170682716 tilS EcSMS35_0199 - tRNA(Ile)-lysidine synthase 200 49.02 0 222860..223114 - 84 170682964 rof EcSMS35_0200 - Rof protein 201 50.75 0 223107..223307 - 66 170681531 - EcSMS35_0201 - hypothetical protein 202 53.11 0 223473..224018 + 181 170682076 - EcSMS35_0202 - hypothetical protein 203 56.26 +1 224015..224437 + 140 170680631 - EcSMS35_0203 - peptidyl-tRNA hydrolase domain-containing protein 204 52.74 0 224451..225161 + 236 170680878 cutF EcSMS35_0204 - copper homeostasis protein CutF 205 47.52 0 225317..226141 - 274 170683602 - EcSMS35_0205 - putative lipoprotein 206 54.16 0 226194..227912 - 572 170680577 proS EcSMS35_0206 - prolyl-tRNA synthetase 207 54.38 0 228023..228730 - 235 170683947 - EcSMS35_0207 - hypothetical protein 208 54.80 0 228727..229080 - 117 170682244 rcsF EcSMS35_0208 - exopolysaccharide synthesis regulator RcsF 209 49.14 0 229249..230064 - 271 170680927 metQ EcSMS35_0209 - D-methionine ABC transporter, periplasmic D-methionine-binding lipoprotein 210 52.14 0 230104..230757 - 217 170683569 metI EcSMS35_0210 - D-methionine ABC transporter, permease protein 211 52.42 0 230750..231781 - 343 170681875 metN EcSMS35_0211 - D-methionine ABC transporter, ATP-binding protein 212 50.79 0 231969..232541 + 190 170680208 - EcSMS35_0212 - D,D-heptose 1,7-bisphosphate phosphatase 213 46.52 0 238293..239096 + 267 170681897 dkgB EcSMS35_0222 - 2,5-didehydrogluconate reductase B 214 49.29 0 239093..240007 - 304 170681248 - EcSMS35_0221 - LysR family transcriptional regulator 215 52.43 0 240248..241048 + 266 170679930 - EcSMS35_0223 - endonuclease/exonuclease/phosphatase family protein 216 49.42 0 241122..241892 + 256 170680535 - EcSMS35_0224 - UbiE/COQ5 family methlytransferase 217 52.17 0 241941..243161 - 406 170681258 mltD EcSMS35_0225 - membrane-bound lytic murein transglycosylase D 218 40.21 -1 243371..244126 - 251 170681858 gloB EcSMS35_0226 - hydroxyacylglutathione hydrolase 219 49.79 0 244160..244882 + 240 170680838 - EcSMS35_0228 - putative methyltransferase 220 50.00 0 244879..245346 - 155 170682534 rnhA EcSMS35_0227 - ribonuclease H 221 51.42 0 245402..246142 + 246 170683943 dnaQ EcSMS35_0229 - DNA polymerase III, epsilon subunit 222 54.73 0 246450..247220 - 256 170682248 - EcSMS35_0231 - carbon-nitrogen family hydrolase 223 50.22 0 247398..247847 + 149 170682383 - EcSMS35_0232 - inhibitor of vertebrate lysozyme 224 56.20 +1 247890..250334 - 814 170681415 fadE EcSMS35_0233 - acyl-coenzyme A dehydrogenase 225 50.78 0 250574..251152 + 192 170681190 gmhA EcSMS35_0234 - phosphoheptose isomerase 226 53.26 0 251268..252035 + 255 170683986 - EcSMS35_0236 - glutamine amidotransferase, class II 227 48.99 0 252006..252746 - 246 170680694 - EcSMS35_0235 - hypothetical protein 228 47.13 0 253182..253442 - 86 170684072 dinJ EcSMS35_0238 - addiction module antitoxin component DinJ 229 52.93 0 253652..254401 + 249 170683259 - EcSMS35_0239 - NlpC/P60 family protein 230 45.18 0 254577..255074 + 165 170683070 - EcSMS35_0240 - hypothetical protein 231 58.02 +1 255186..257279 - 697 170681922 lfhA EcSMS35_0241 - lateral flagellar export/assembly protein LfhA 232 55.70 0 257263..258402 - 379 170683079 lfhB EcSMS35_0242 - lateral flagellar export/assembly protein LfhB 233 55.68 0 258392..259174 - 260 170683764 lfiR EcSMS35_0243 - lateral flagellar export/assembly protein LfiR 234 54.95 0 259176..259448 - 90 170683515 lfiQ EcSMS35_0244 - lateral flagellar export/assembly protein LfiQ 235 56.57 +1 259451..260203 - 250 170684182 lfiP EcSMS35_0245 - lateral flagellar export/assembly protein LfiP 236 54.84 0 260200..260571 - 123 170679793 lfiN EcSMS35_0246 - lateral flagellar export/assembly protein LfiN 237 47.89 0 260564..261415 - 283 170680472 lfiM EcSMS35_0247 - lateral flagellar export/assembly protein LfiM 238 51.87 0 261788..262774 + 328 170681447 lafK EcSMS35_0248 - lateral flagellar RpoN-interacting regulatory protein LafK 239 58.48 +1 262789..263130 + 113 170682132 lfiE EcSMS35_0249 - lateral flagellar basal body component protein LfiE 240 58.17 +1 263135..264781 + 548 170682472 lfiF EcSMS35_0250 - lateral flagellar M-ring protein LfiF 241 57.76 +1 264759..265769 + 336 170683129 lfiG EcSMS35_0251 - lateral flagellar C-ring switch protein LfiG 242 60.48 +1 265772..266482 + 236 170682740 lfiH EcSMS35_0252 - lateral flagellar export/assembly protein LfiH 243 61.58 +2 266475..267812 + 445 170682099 lfiI EcSMS35_0253 - lateral flagellar export/assembly protein LfiI 244 55.40 0 267815..268249 + 144 170679816 lfiJ EcSMS35_0254 - lateral flagellar export/assembly protein LfiJ 245 56.57 +1 268252..268647 + 131 170681619 - EcSMS35_0255 - cytidyltransferase-like protein 246 26.80 -2 268659..268964 - 101 170683506 - EcSMS35_0256 - hypothetical protein 247 35.64 -2 269191..270012 - 273 170680626 - EcSMS35_0257 - hypothetical protein 248 54.52 0 270338..272782 - 814 170680272 - EcSMS35_0258 - glycosyl transferase, group 2 family protein 249 54.95 0 272961..273890 - 309 170683346 lafV EcSMS35_0259 - lateral flagellar associated protein LafV 250 51.75 0 274018..274446 - 142 170683864 lfgN EcSMS35_0260 - lateral flagellar chaperone protein LfgN 251 58.78 +1 274459..274737 - 92 170682864 lfgM EcSMS35_0261 - lateral flagellar anti-sigma factor 28 protein LfgM 252 57.72 +1 274817..275554 - 245 170682474 lfgA EcSMS35_0262 - lateral flagellar P-ring addition protein LfgA 253 50.89 0 275636..275971 + 111 170681292 lfgB EcSMS35_0263 - lateral flagellar rod protein LfgB 254 56.48 +1 275974..276405 + 143 170683008 lfgC EcSMS35_0264 - lateral flagellar basal-body rod protein LfgC 255 59.38 +1 276405..277118 + 237 170679856 lfgD EcSMS35_0265 - lateral flagellar rod protein LfgD 256 57.36 +1 277141..278343 + 400 170681389 lfgE EcSMS35_0266 - lateral flagellar hook protein LfgE 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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