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Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1952 52.49 0 2039138..2040442 - 434 170683647 ndh EcSMS35_2017 - NADH dehydrogenase 1953 46.78 0 2040842..2041384 - 180 170684181 - EcSMS35_2018 - hypothetical protein 1954 52.53 0 2041407..2042432 - 341 170683662 nagZ EcSMS35_2019 - beta-N-acetylhexosaminidase 1955 53.45 0 2042443..2043267 - 274 170684187 thiK EcSMS35_2020 - thiamine kinase 1956 55.76 0 2043248..2043889 - 213 170682321 - EcSMS35_2021 - putative lipoprotein 1957 50.00 0 2043903..2044256 - 117 170682863 - EcSMS35_2022 - putative lipoprotein 1958 50.83 0 2044283..2044642 - 119 170681005 hinT EcSMS35_2023 - purine nucleoside phosphoramidase 1959 39.18 -2 2044773..2044943 + 56 170681437 - EcSMS35_2024 - hypothetical protein 1960 49.63 0 2044976..2047165 + 729 170682970 fhuE EcSMS35_2025 - TonB-dependent siderophore receptor FhuE 1961 52.51 0 2047225..2048658 - 477 170681251 ptsG EcSMS35_2026 - PTS system, glucose-specific IIBC component 1962 51.25 0 2048953..2049750 - 265 170681009 - EcSMS35_2027 - TatD family hydrolase 1963 54.03 0 2049761..2050765 - 334 170681498 holB EcSMS35_2028 - DNA polymerase III, delta' subunit 1964 53.43 0 2050762..2051403 - 213 170679734 tmk EcSMS35_2029 - thymidylate kinase 1965 51.12 0 2051393..2052415 - 340 170680200 - EcSMS35_2030 - hypothetical protein 1966 51.23 0 2052418..2053227 - 269 170683633 pabC EcSMS35_2031 - aminodeoxychorismate lyase 1967 53.46 0 2053347..2054588 - 413 170684179 fabF EcSMS35_2032 - 3-oxoacyl-[acyl-carrier-protein] synthase II 1968 48.10 0 2054676..2054912 - 78 170681281 acpP EcSMS35_2033 - acyl carrier protein 1969 51.56 0 2055123..2055857 - 244 170681771 fabG EcSMS35_2034 - 3-oxoacyl-[acyl-carrier-protein] reductase 1970 54.52 0 2055870..2056799 - 309 170683344 fabD EcSMS35_2035 - malonyl CoA-acyl carrier protein transacylase 1971 54.61 0 2056815..2057768 - 317 170680158 fabH EcSMS35_2036 - 3-oxoacyl-[acyl-carrier-protein] synthase 3 1972 52.01 0 2057836..2058906 - 356 170679989 plsX EcSMS35_2037 - fatty acid/phospholipid synthesis protein PlsX 1973 54.02 0 2058987..2059160 - 57 170681368 rpmF EcSMS35_2038 - ribosomal protein L32 1974 49.43 0 2059212..2059733 - 173 170683047 - EcSMS35_2039 - hypothetical protein 1975 48.88 0 2059893..2060516 + 207 170682397 maf2 EcSMS35_2040 - septum formation protein Maf 1976 51.15 0 2060627..2061586 - 319 170684091 rluC EcSMS35_2041 - ribosomal large subunit pseudouridine synthase C 1977 55.70 0 2062159..2065332 + 1057 170683427 rne EcSMS35_2042 - ribonuclease E 1978 51.36 0 2065466..2065759 + 97 170683916 - EcSMS35_2043 - hypothetical protein 1979 48.69 0 2065756..2066250 + 164 170683407 - EcSMS35_2044 - acetyltransferase 1980 51.26 0 2066345..2067298 - 317 170680479 flgL EcSMS35_2045 - flagellar hook-associated protein 3 1981 52.25 0 2067310..2068953 - 547 170683657 flgK EcSMS35_2046 - flagellar hook-associated protein FlgK 1982 54.88 0 2069019..2069960 - 313 170683831 flgJ EcSMS35_2047 - flagellar rod assembly protein/muramidase FlgJ 1983 54.37 0 2069960..2071057 - 365 170681975 flgI EcSMS35_2048 - flagellar P-ring protein FlgI 1984 53.36 0 2071069..2071767 - 232 170681726 flgH EcSMS35_2049 - flagellar L-ring protein FlgH 1985 53.26 0 2071820..2072602 - 260 170679890 flgG EcSMS35_2050 - flagellar basal-body rod protein FlgG 1986 59.39 +1 2072739..2073494 - 251 170680164 flgF EcSMS35_2051 - flagellar basal-body rod protein FlgF 1987 51.82 0 2073514..2074719 - 401 170683341 flgE EcSMS35_2052 - flagellar hook protein FlgE 1988 54.02 0 2074744..2075439 - 231 170682037 flgD EcSMS35_2053 - flagellar hook capping protein FlgD 1989 52.59 0 2075451..2075855 - 134 170682563 flgC EcSMS35_2054 - flagellar basal-body rod protein FlgC 1990 53.00 0 2075859..2076275 - 138 170683265 flgB EcSMS35_2055 - flagellar basal-body rod protein FlgB 1991 47.95 0 2076292..2076462 - 56 170683974 - EcSMS35_2056 - hypothetical protein 1992 53.18 0 2076431..2077090 + 219 170681963 flgA EcSMS35_2057 - flagella basal body P-ring formation protein FlgA 1993 53.40 0 2077166..2077459 + 97 170682624 flgM EcSMS35_2058 - negative regulator of flagellin synthesis FlgM 1994 47.96 0 2077464..2077880 + 138 170683502 flgN EcSMS35_2059 - flagella synthesis protein FlgN 1995 53.39 0 2077920..2079455 - 511 170684055 mviN EcSMS35_2060 - integral membrane protein MviN 1996 55.19 0 2079565..2080488 - 307 170682396 - EcSMS35_2061 - oxidoreductase family protein 1997 51.70 0 2080490..2081137 - 215 170682009 - EcSMS35_2062 - hypothetical protein 1998 49.23 0 2081148..2081732 - 194 170680882 rimJ EcSMS35_2063 - ribosomal-protein-alanine acetyltransferase 1999 55.17 0 2081968..2083176 + 402 170681348 mdtH EcSMS35_2064 - multidrug resistance protein MdtH 2000 48.92 0 2083240..2083887 + 215 170682344 grxB EcSMS35_2065 - GrxB family glutaredoxin 2001 47.59 0 2084021..2084581 + 186 170682904 - EcSMS35_2066 - putative lipoprotein 2002 53.49 0 2084687..2085733 + 348 170680153 pyrC EcSMS35_2067 - dihydroorotase, homodimeric type 2003 47.97 0 2085807..2086052 + 81 170680988 dinI EcSMS35_2068 - DNA-damage-inducible protein I 2004 45.49 0 2086342..2086596 + 84 170679713 - EcSMS35_2069 - hypothetical protein 2005 52.19 0 2086711..2087829 + 372 170680185 solA EcSMS35_2070 - N-methyl-L-tryptophan oxidase 2006 37.72 -2 2087877..2087990 + 37 170683645 - EcSMS35_2071 - hypothetical protein 2007 27.89 -2 2088115..2088261 - 48 170684007 - EcSMS35_2072 - hypothetical protein 2008 48.91 0 2088176..2088817 + 213 170679945 - EcSMS35_2073 - nickel-dependent hydrogenase b-type cytochrome subunit 2009 46.53 0 2088821..2089396 + 191 170680452 yceI EcSMS35_2074 - YceI protein 2010 49.19 0 2089438..2090490 - 350 170680794 - EcSMS35_2075 - rhodanese domain-containing protein 2011 52.55 0 2090715..2091635 + 306 170681218 lpxL EcSMS35_2076 - lipid A biosynthesis lauroyl acyltransferase 2012 52.16 0 2091807..2093033 + 408 170679802 mdtG EcSMS35_2077 - multidrug resistance protein MdtG 2013 50.93 0 2093116..2093490 + 124 170680181 msyB EcSMS35_2078 - acidic protein MsyB 2014 50.44 0 2093491..2093718 - 75 170683455 - EcSMS35_2079 - putative lipoprotein 2015 54.85 0 2093891..2096404 - 837 170684144 mdoH EcSMS35_2080 - glucans biosynthesis glucosyltransferase H 2016 49.68 0 2096427..2097980 - 517 170682373 mdoG EcSMS35_2081 - glucans biosynthesis protein G 2017 48.48 0 2098033..2098164 + 43 170682926 - EcSMS35_2082 - hypothetical protein 2018 47.92 0 2098168..2098311 + 47 170683681 - EcSMS35_2083 - hypothetical protein 2019 44.21 -1 2098356..2099513 + 385 170684209 mdoC EcSMS35_2084 - glucans biosynthesis protein C 2020 50.70 0 2099521..2100942 - 473 170682775 - EcSMS35_2085 - phopholipase D 2021 51.50 0 2100944..2101477 - 177 170681971 - EcSMS35_2086 - appr-1-p processing domain-containing protein 2022 42.31 -1 2101572..2101727 - 51 170683875 - EcSMS35_2087 - hypothetical protein 2023 43.54 -1 2102004..2102336 - 110 170683039 csgC EcSMS35_2088 - curli production protein CsgC 2024 51.32 0 2102394..2102849 - 151 170679882 csgA EcSMS35_2089 - major curlin protein CsgA 2025 42.44 -1 2102890..2103372 - 160 170684268 csgB EcSMS35_2090 - minor curlin protein CsgB 2026 34.95 -2 2103448..2103633 + 61 170681225 - EcSMS35_2091 - hypothetical protein 2027 40.91 -1 2103986..2104117 - 43 170680210 - EcSMS35_2092 - hypothetical protein 2028 42.93 -1 2104178..2104750 + 190 170682157 csgD EcSMS35_2093 - transcriptional regulator CsgD 2029 42.82 -1 2104755..2105144 + 129 170681334 csgE EcSMS35_2094 - curli production assembly/transport subunit CsgE 2030 42.21 -1 2105169..2105585 + 138 170680050 csgF EcSMS35_2095 - curli production assembly/transport component CsgF 2031 50.12 0 2105612..2106445 + 277 170684167 csgG EcSMS35_2096 - curli production assembly/transport subunit CsgG 2032 54.21 0 2106509..2107030 - 173 170680973 - EcSMS35_2097 - hypothetical protein 2033 53.33 0 2107102..2107656 - 184 170680426 - EcSMS35_2098 - chaperone TorD 2034 47.97 0 2107680..2108417 - 245 170682055 - EcSMS35_2099 - phosphotransferase domain-containing protein 2035 51.01 0 2108472..2109410 - 312 170682399 - EcSMS35_2100 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 2036 43.09 -1 2109823..2110509 - 228 170684239 - EcSMS35_2102 - hypothetical protein 2037 51.55 0 2111072..2112136 - 354 170683480 phoH EcSMS35_2103 - protein phoH 2038 54.09 0 2112481..2113752 - 423 170680570 - EcSMS35_2104 - Tat-translocated enzyme 2039 51.24 0 2113758..2114885 - 375 170682015 - EcSMS35_2105 - hypothetical protein 2040 54.75 0 2114943..2115773 - 276 170683993 - EcSMS35_2106 - iron permease FTR1 family protein 2041 31.78 -2 2115809..2115937 + 42 170683305 - EcSMS35_2107 - hypothetical protein 2042 54.27 0 2115993..2117501 - 502 170682638 putP EcSMS35_2108 - sodium/proline symporter 2043 45.65 0 2117491..2117628 - 45 170681977 - EcSMS35_2109 - hypothetical protein 2044 35.71 -2 2117660..2117869 - 69 170681915 - EcSMS35_2110 - hypothetical protein 2045 56.32 +1 2117924..2121886 + 1320 170681102 putA EcSMS35_2111 - bifunctional protein PutA 2046 50.39 0 2121926..2122564 - 212 170680576 rutR EcSMS35_2112 - transcriptional regulator RutR 2047 55.13 0 2122852..2123943 + 363 170680078 - EcSMS35_2113 - putative monooxygenase rutA 2048 55.32 0 2123940..2124635 + 231 170683118 - EcSMS35_2114 - putative isochorismatase family protein, rutB 2049 53.75 0 2124647..2125033 + 128 170680387 - EcSMS35_2115 - rutC protein 2050 57.81 +1 2125041..2125853 + 270 170681429 - EcSMS35_2116 - putative rutD protein 2051 57.02 +1 2125850..2126440 + 196 170681978 - EcSMS35_2117 - putative rutE protein 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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