version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1780 47.70 0 1868356..1868529 + 57 170680708 - EcSMS35_1843 - hypothetical protein 1781 49.33 0 1868619..1869368 + 249 170683876 - EcSMS35_1844 - DeoR family transcriptional regulator 1782 52.51 0 1869637..1869855 + 72 170681513 - EcSMS35_1845 - osmotically inducible lipoprotein B 1783 50.30 0 1869981..1870310 - 109 170680982 - EcSMS35_1846 - putative translation initation factor SUI1 1784 53.25 0 1870307..1871044 - 245 170680162 pyrF EcSMS35_1847 - orotidine 5'-phosphate decarboxylase 1785 48.37 0 1871060..1871212 + 50 170679727 - EcSMS35_1848 - hypothetical protein 1786 52.31 0 1871236..1872405 - 389 170683676 - EcSMS35_1849 - TPR repeat-containing protein 1787 49.84 0 1872412..1872720 - 102 170680512 - EcSMS35_1850 - hypothetical protein 1788 49.93 0 1872869..1873633 - 254 170682357 pgpB EcSMS35_1851 - phosphatidylglycerophosphatase B 1789 49.92 0 1873803..1874393 + 196 170683390 ribA EcSMS35_1852 - GTP cyclohydrolase II 1790 52.88 0 1874457..1877132 - 891 170681003 acnA EcSMS35_1853 - aconitate hydratase 1 1791 45.24 0 1877452..1877619 - 55 170681124 - EcSMS35_1854 - hypothetical protein 1792 48.84 0 1877622..1877750 - 42 170680282 - EcSMS35_1855 - hypothetical protein 1793 48.92 0 1878081..1879055 - 324 170679623 cysB EcSMS35_1856 - HTH-type transcriptional regulator CysB 1794 51.66 0 1879264..1881861 - 865 170682590 topA EcSMS35_1857 - DNA topoisomerase I 1795 47.62 0 1882241..1882492 + 83 170681925 - EcSMS35_1858 - hypothetical protein 1796 50.67 0 1882528..1883577 - 349 170682481 sohB EcSMS35_1859 - S49 family peptidase 1797 52.17 0 1883797..1884555 + 252 170681806 - EcSMS35_1860 - short chain dehydrogenase/reductase family oxidoreductase 1798 50.08 0 1884552..1885142 + 196 170680960 btuR EcSMS35_1861 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1799 34.95 -2 1885195..1885503 - 102 170680559 - EcSMS35_1862 - hypothetical protein 1800 37.82 -2 1885514..1886515 - 333 170679656 - EcSMS35_1863 - putative lipoprotein 1801 53.88 0 1886685..1887560 - 291 170682451 rluB EcSMS35_1864 - ribosomal large subunit pseudouridine synthase B 1802 47.15 0 1887771..1889666 - 631 170681982 - EcSMS35_1865 - hypothetical protein 1803 49.16 0 1889694..1890350 - 218 170681810 - EcSMS35_1866 - Sua5/YciO/YrdC/YwlC family protein 1804 53.97 0 1890311..1891192 - 293 170681023 - EcSMS35_1867 - putative phosphoesterase 1805 54.06 0 1891466..1893028 + 520 170680165 trpE EcSMS35_1868 - anthranilate synthase, component I 1806 56.20 +1 1893028..1894623 + 531 170679698 trpD EcSMS35_1869 - anthranilate synthase, component II 1807 52.64 0 1894624..1895985 + 453 170683763 trpC EcSMS35_1870 - tryptophan biosynthesis protein trpCF 1808 54.61 0 1895997..1897190 + 397 170683411 trpB EcSMS35_1871 - tryptophan synthase, beta subunit 1809 55.02 0 1897190..1897996 + 268 170682783 trpA EcSMS35_1872 - tryptophan synthase, alpha subunit 1810 50.00 0 1898377..1898556 + 59 170681776 - EcSMS35_1873 - hypothetical protein 1811 41.57 -1 1898621..1899142 + 173 170680983 yciF EcSMS35_1874 - YciF protein 1812 41.94 -1 1899415..1899693 + 92 170681561 - EcSMS35_1875 - hypothetical protein 1813 50.55 0 1899753..1900391 - 212 170682349 ompW EcSMS35_1876 - outer membrane protein W 1814 48.66 0 1900746..1901489 + 247 170684316 - EcSMS35_1877 - hypothetical protein 1815 46.67 0 1901519..1902058 + 179 170680207 ispZ EcSMS35_1878 - intracellular septation protein A 1816 49.12 0 1902163..1902561 + 132 170680833 yciA EcSMS35_1879 - acyl-CoA thioesterase YciA 1817 53.69 0 1902601..1903332 - 243 170681605 tonB EcSMS35_1880 - outer membrane receptor-mediated transport energizer protein TonB 1818 49.16 0 1903541..1903837 + 98 170682147 - EcSMS35_1881 - YciL domain-containing protein 1819 48.06 0 1903990..1904247 + 85 170682975 - EcSMS35_1882 - hypothetical protein 1820 32.50 -2 1904356..1906149 + 597 170683822 - EcSMS35_1884 - sulfatase family protein 1821 42.83 -1 1906146..1906745 - 199 170682453 - EcSMS35_1883 - hypothetical protein 1822 47.19 0 1906891..1907157 - 88 170680068 - EcSMS35_1885 - hypothetical protein 1823 53.16 0 1907391..1907738 + 115 170680737 - EcSMS35_1886 - IS3 family transposase 1824 50.61 0 1907782..1908192 + 136 170681071 - EcSMS35_1887 - IS2 transposase orfA 1825 54.97 0 1908150..1909055 + 301 170680938 - EcSMS35_1888 - IS2 transposase orfB 1826 50.19 0 1909030..1909569 + 179 170682061 - EcSMS35_1889 - IS911 transposase orfB 1827 42.51 -1 1910255..1911463 + 402 170682593 kch EcSMS35_1890 - potassium channel protein kch 1828 51.47 0 1911834..1913294 + 486 170683378 cls EcSMS35_1891 - cardiolipin synthetase 1829 47.88 0 1913329..1913658 + 109 170683928 - EcSMS35_1892 - hypothetical protein 1830 52.14 0 1913711..1914715 - 334 170680026 oppF EcSMS35_1893 - oligopeptide ABC transporter, ATP-binding protein OppF 1831 51.97 0 1914712..1915725 - 337 170684293 oppD EcSMS35_1894 - oligopeptide ABC transporter, ATP-binding protein OppD 1832 52.98 0 1915737..1916642 - 301 170683469 oppC EcSMS35_1895 - oligopeptide ABC transporter, permease protein OppC 1833 46.15 0 1916660..1917580 - 306 170681715 oppB EcSMS35_1896 - oligopeptide ABC transporter, permease protein OppB 1834 47.23 0 1917666..1919342 - 558 170681304 oppA EcSMS35_1897 - oligopeptide ABC transporter, periplasmic oligopeptide-binding protein 1835 33.00 -2 1919581..1919877 + 98 170682343 - EcSMS35_1899 - hypothetical protein 1836 33.33 -2 1919853..1920008 - 51 170682771 - EcSMS35_1898 - hypothetical protein 1837 47.69 0 1920035..1920682 - 215 170681952 - EcSMS35_1900 - MarC family integral membrane protein 1838 50.41 0 1921159..1923834 + 891 170683946 adhE EcSMS35_1901 - aldehyde-alcohol dehydrogenase 1839 43.04 -1 1924137..1924754 - 205 170680630 tdk EcSMS35_1902 - thymidine kinase 1840 37.21 -2 1925138..1925266 + 42 170680309 - EcSMS35_1903 - hypothetical protein 1841 46.86 0 1925358..1925771 + 137 170681125 - EcSMS35_1904 - H-NS histone family protein 1842 47.30 0 1925916..1926824 - 302 170681483 galU EcSMS35_1905 - UTP-glucose-1-phosphate uridylyltransferase 1843 48.72 0 1927026..1928039 - 337 170681852 - EcSMS35_1906 - response regulator receiver domain-containing protein 1844 50.58 0 1928131..1929075 - 314 170679923 - EcSMS35_1907 - patatin family phospholipase 1845 46.25 0 1929128..1929607 + 159 170683220 - EcSMS35_1908 - SecC motif-containing protein 1846 47.69 0 1929657..1930499 + 280 170683587 purU EcSMS35_1909 - formyltetrahydrofolate deformylase 1847 55.31 0 1931224..1931901 - 225 170683883 narI EcSMS35_1912 - respiratory nitrate reductase 1, gamma subunit 1848 55.13 0 1931901..1932611 - 236 170682335 narJ EcSMS35_1913 - nitrate reductase molybdenum cofactor assembly chaperone 1 1849 54.58 0 1932608..1934146 - 512 170682579 narH EcSMS35_1914 - nitrate reductase 1, beta subunit 1850 55.10 0 1934143..1937886 - 1247 170681018 narG EcSMS35_1915 - nitrate reductase 1, alpha subunit 1851 53.74 0 1938280..1939671 - 463 170682669 narK EcSMS35_1916 - nitrite extrusion protein 1 1852 38.81 -2 1939766..1939984 - 72 170681694 - EcSMS35_1917 - hypothetical protein 1853 53.31 0 1940010..1941806 + 598 170682187 narX EcSMS35_1918 - nitrate/nitrite sensor protein NarX 1854 51.61 0 1941799..1942449 + 216 170682686 narL EcSMS35_1919 - nitrate/nitrite response regulator protein NarL 1855 51.04 0 1942450..1943844 - 464 170683203 - EcSMS35_1920 - putative invasin 1856 50.85 0 1944029..1944382 + 117 170684178 - EcSMS35_1921 - dsrE family protein 1857 55.46 0 1944426..1945121 - 231 170682112 - EcSMS35_1922 - chaC protein 1858 45.45 0 1945279..1945509 - 76 170682769 - EcSMS35_1923 - chaB protein 1859 48.59 0 1945779..1946879 + 366 170683139 - EcSMS35_1924 - calcium/proton antiporter 1860 53.33 0 1947258..1947392 + 44 170683803 - EcSMS35_1925 - hypothetical protein 1861 52.59 0 1947793..1947927 + 44 170680049 - EcSMS35_1926 - hypothetical protein 1862 50.99 0 1948076..1948930 - 284 170684298 kdsA EcSMS35_1927 - 3-deoxy-8-phosphooctulonate synthase 1863 46.42 0 1948966..1949775 - 269 170680182 sirB1 EcSMS35_1928 - sirB1 protein 1864 47.33 0 1949779..1950171 - 130 170680676 - EcSMS35_1929 - putative invasion gene expression up-regulator SirB 1865 55.28 0 1950168..1951001 - 277 170683182 hemK EcSMS35_1930 - protein-(glutamine-N5) methyltransferase, release factor-specific 1866 52.82 0 1951001..1952083 - 360 170682630 prfA EcSMS35_1931 - peptide chain release factor 1 1867 54.49 0 1952125..1953381 - 418 170680594 hemA EcSMS35_1932 - glutamyl-tRNA reductase 1868 50.48 0 1953595..1954218 + 207 170680111 lolB EcSMS35_1933 - outer membrane lipoprotein LolB 1869 53.05 0 1954218..1955069 + 283 170681054 ispE EcSMS35_1934 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 1870 52.86 0 1955154..1956167 + 337 170680628 prs EcSMS35_1935 - ribose-phosphate pyrophosphokinase 1871 54.35 0 1956292..1957971 + 559 170679649 ychM EcSMS35_1936 - sulfate permease 1872 52.69 0 1958026..1958304 - 92 170683871 - EcSMS35_1937 - hypothetical protein 1873 49.74 0 1958582..1959166 + 194 170681473 pth EcSMS35_1938 - peptidyl-tRNA hydrolase 1874 51.19 0 1959283..1960374 + 363 170680985 engD EcSMS35_1939 - GTP-binding protein EngD 1875 51.41 0 1960779..1962698 - 639 170682289 dhaR EcSMS35_1940 - PTS-dependent dihydroxyacetone kinase operon regulatory protein DhaR 1876 52.75 0 1962926..1963996 + 356 170681763 dhaK EcSMS35_1941 - PTS-dependent dihydroxyacetone kinase, DhaK subunit 1877 53.24 0 1964007..1964639 + 210 170682562 dhaL EcSMS35_1942 - PTS-dependent dihydroxyacetone kinase, DhaL subunit 1878 50.18 0 1964650..1966068 + 472 170682048 dhaM EcSMS35_1943 - PTS-dependent dihydroxyacetone kinase, DhaM subunit 1879 39.47 -2 1966095..1966208 + 37 170683927 - EcSMS35_1944 - hypothetical protein 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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