version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1760 50.72 0 1843267..1843824 - 185 170680966 puuR EcSMS35_1823 - transcriptional regulator PuuR 1761 53.52 0 1843851..1844603 - 250 170679609 puuD EcSMS35_1824 - gamma-glutamyl-gamma-aminobutyrate hydrolase 1762 53.56 0 1844827..1846245 + 472 170682225 puuA EcSMS35_1825 - glutamate--putrescine ligase 1763 53.61 0 1846548..1847933 + 461 170682974 - EcSMS35_1826 - amino acid permease 1764 48.78 0 1848067..1848312 + 81 170683601 - EcSMS35_1827 - hypothetical protein 1765 54.14 0 1848649..1850268 + 539 170684301 sapA EcSMS35_1828 - peptide ABC transporter, periplasmic peptide-binding protein 1766 50.62 0 1850265..1851230 + 321 170683242 sapB EcSMS35_1829 - peptide ABC transporter, permease protein SapB 1767 57.13 +1 1851217..1852107 + 296 170684277 sapC EcSMS35_1830 - peptide ABC transporter, permease protein SapC 1768 51.06 0 1852107..1853099 + 330 170679617 sapD EcSMS35_1831 - peptide ABC transporter, ATP-binding protein SapD 1769 51.55 0 1853101..1853907 + 268 170680270 sapF EcSMS35_1832 - peptide transport system, ATP-binding protein SapF 1770 49.48 0 1853956..1855119 - 387 170680921 eefD EcSMS35_1833 - multidrug efflux transport protein EefD 1771 53.78 0 1855128..1856501 - 457 170681888 eefC EcSMS35_1834 - multidrug efflux outer membrane protein EefC 1772 51.93 0 1856505..1859612 - 1035 170683789 eefB EcSMS35_1835 - multidrug efflux transport protein EefB 1773 51.52 0 1859612..1860733 - 373 170683115 eefA EcSMS35_1836 - multidrug efflux transport protein EefA 1774 47.97 0 1860882..1861448 - 188 170681981 eefR EcSMS35_1837 - transcriptional regulator EefR 1775 42.55 -1 1861624..1861764 - 46 170683953 - EcSMS35_1838 - hypothetical protein 1776 53.74 0 1861926..1862714 + 262 170680950 fabI EcSMS35_1839 - enoyl-(acyl-carrier-protein) reductase (NADH) 1777 50.53 0 1862859..1863986 + 375 170682969 - EcSMS35_1840 - hypothetical protein 1778 53.39 0 1864054..1865988 + 644 170681733 rnb EcSMS35_1841 - exoribonuclease II 1779 48.54 0 1866223..1868208 + 661 170681077 - EcSMS35_1842 - sensory box-containing diguanylate cyclase/cyclic diguanylate phosphodiesterase 1780 47.70 0 1868356..1868529 + 57 170680708 - EcSMS35_1843 - hypothetical protein 1781 49.33 0 1868619..1869368 + 249 170683876 - EcSMS35_1844 - DeoR family transcriptional regulator 1782 52.51 0 1869637..1869855 + 72 170681513 - EcSMS35_1845 - osmotically inducible lipoprotein B 1783 50.30 0 1869981..1870310 - 109 170680982 - EcSMS35_1846 - putative translation initation factor SUI1 1784 53.25 0 1870307..1871044 - 245 170680162 pyrF EcSMS35_1847 - orotidine 5'-phosphate decarboxylase 1785 48.37 0 1871060..1871212 + 50 170679727 - EcSMS35_1848 - hypothetical protein 1786 52.31 0 1871236..1872405 - 389 170683676 - EcSMS35_1849 - TPR repeat-containing protein 1787 49.84 0 1872412..1872720 - 102 170680512 - EcSMS35_1850 - hypothetical protein 1788 49.93 0 1872869..1873633 - 254 170682357 pgpB EcSMS35_1851 - phosphatidylglycerophosphatase B 1789 49.92 0 1873803..1874393 + 196 170683390 ribA EcSMS35_1852 - GTP cyclohydrolase II 1790 52.88 0 1874457..1877132 - 891 170681003 acnA EcSMS35_1853 - aconitate hydratase 1 1791 45.24 0 1877452..1877619 - 55 170681124 - EcSMS35_1854 - hypothetical protein 1792 48.84 0 1877622..1877750 - 42 170680282 - EcSMS35_1855 - hypothetical protein 1793 48.92 0 1878081..1879055 - 324 170679623 cysB EcSMS35_1856 - HTH-type transcriptional regulator CysB 1794 51.66 0 1879264..1881861 - 865 170682590 topA EcSMS35_1857 - DNA topoisomerase I 1795 47.62 0 1882241..1882492 + 83 170681925 - EcSMS35_1858 - hypothetical protein 1796 50.67 0 1882528..1883577 - 349 170682481 sohB EcSMS35_1859 - S49 family peptidase 1797 52.17 0 1883797..1884555 + 252 170681806 - EcSMS35_1860 - short chain dehydrogenase/reductase family oxidoreductase 1798 50.08 0 1884552..1885142 + 196 170680960 btuR EcSMS35_1861 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1799 34.95 -2 1885195..1885503 - 102 170680559 - EcSMS35_1862 - hypothetical protein 1800 37.82 -2 1885514..1886515 - 333 170679656 - EcSMS35_1863 - putative lipoprotein 1801 53.88 0 1886685..1887560 - 291 170682451 rluB EcSMS35_1864 - ribosomal large subunit pseudouridine synthase B 1802 47.15 0 1887771..1889666 - 631 170681982 - EcSMS35_1865 - hypothetical protein 1803 49.16 0 1889694..1890350 - 218 170681810 - EcSMS35_1866 - Sua5/YciO/YrdC/YwlC family protein 1804 53.97 0 1890311..1891192 - 293 170681023 - EcSMS35_1867 - putative phosphoesterase 1805 54.06 0 1891466..1893028 + 520 170680165 trpE EcSMS35_1868 - anthranilate synthase, component I 1806 56.20 +1 1893028..1894623 + 531 170679698 trpD EcSMS35_1869 - anthranilate synthase, component II 1807 52.64 0 1894624..1895985 + 453 170683763 trpC EcSMS35_1870 - tryptophan biosynthesis protein trpCF 1808 54.61 0 1895997..1897190 + 397 170683411 trpB EcSMS35_1871 - tryptophan synthase, beta subunit 1809 55.02 0 1897190..1897996 + 268 170682783 trpA EcSMS35_1872 - tryptophan synthase, alpha subunit 1810 50.00 0 1898377..1898556 + 59 170681776 - EcSMS35_1873 - hypothetical protein 1811 41.57 -1 1898621..1899142 + 173 170680983 yciF EcSMS35_1874 - YciF protein 1812 41.94 -1 1899415..1899693 + 92 170681561 - EcSMS35_1875 - hypothetical protein 1813 50.55 0 1899753..1900391 - 212 170682349 ompW EcSMS35_1876 - outer membrane protein W 1814 48.66 0 1900746..1901489 + 247 170684316 - EcSMS35_1877 - hypothetical protein 1815 46.67 0 1901519..1902058 + 179 170680207 ispZ EcSMS35_1878 - intracellular septation protein A 1816 49.12 0 1902163..1902561 + 132 170680833 yciA EcSMS35_1879 - acyl-CoA thioesterase YciA 1817 53.69 0 1902601..1903332 - 243 170681605 tonB EcSMS35_1880 - outer membrane receptor-mediated transport energizer protein TonB 1818 49.16 0 1903541..1903837 + 98 170682147 - EcSMS35_1881 - YciL domain-containing protein 1819 48.06 0 1903990..1904247 + 85 170682975 - EcSMS35_1882 - hypothetical protein 1820 32.50 -2 1904356..1906149 + 597 170683822 - EcSMS35_1884 - sulfatase family protein 1821 42.83 -1 1906146..1906745 - 199 170682453 - EcSMS35_1883 - hypothetical protein 1822 47.19 0 1906891..1907157 - 88 170680068 - EcSMS35_1885 - hypothetical protein 1823 53.16 0 1907391..1907738 + 115 170680737 - EcSMS35_1886 - IS3 family transposase 1824 50.61 0 1907782..1908192 + 136 170681071 - EcSMS35_1887 - IS2 transposase orfA 1825 54.97 0 1908150..1909055 + 301 170680938 - EcSMS35_1888 - IS2 transposase orfB 1826 50.19 0 1909030..1909569 + 179 170682061 - EcSMS35_1889 - IS911 transposase orfB 1827 42.51 -1 1910255..1911463 + 402 170682593 kch EcSMS35_1890 - potassium channel protein kch 1828 51.47 0 1911834..1913294 + 486 170683378 cls EcSMS35_1891 - cardiolipin synthetase 1829 47.88 0 1913329..1913658 + 109 170683928 - EcSMS35_1892 - hypothetical protein 1830 52.14 0 1913711..1914715 - 334 170680026 oppF EcSMS35_1893 - oligopeptide ABC transporter, ATP-binding protein OppF 1831 51.97 0 1914712..1915725 - 337 170684293 oppD EcSMS35_1894 - oligopeptide ABC transporter, ATP-binding protein OppD 1832 52.98 0 1915737..1916642 - 301 170683469 oppC EcSMS35_1895 - oligopeptide ABC transporter, permease protein OppC 1833 46.15 0 1916660..1917580 - 306 170681715 oppB EcSMS35_1896 - oligopeptide ABC transporter, permease protein OppB 1834 47.23 0 1917666..1919342 - 558 170681304 oppA EcSMS35_1897 - oligopeptide ABC transporter, periplasmic oligopeptide-binding protein 1835 33.00 -2 1919581..1919877 + 98 170682343 - EcSMS35_1899 - hypothetical protein 1836 33.33 -2 1919853..1920008 - 51 170682771 - EcSMS35_1898 - hypothetical protein 1837 47.69 0 1920035..1920682 - 215 170681952 - EcSMS35_1900 - MarC family integral membrane protein 1838 50.41 0 1921159..1923834 + 891 170683946 adhE EcSMS35_1901 - aldehyde-alcohol dehydrogenase 1839 43.04 -1 1924137..1924754 - 205 170680630 tdk EcSMS35_1902 - thymidine kinase 1840 37.21 -2 1925138..1925266 + 42 170680309 - EcSMS35_1903 - hypothetical protein 1841 46.86 0 1925358..1925771 + 137 170681125 - EcSMS35_1904 - H-NS histone family protein 1842 47.30 0 1925916..1926824 - 302 170681483 galU EcSMS35_1905 - UTP-glucose-1-phosphate uridylyltransferase 1843 48.72 0 1927026..1928039 - 337 170681852 - EcSMS35_1906 - response regulator receiver domain-containing protein 1844 50.58 0 1928131..1929075 - 314 170679923 - EcSMS35_1907 - patatin family phospholipase 1845 46.25 0 1929128..1929607 + 159 170683220 - EcSMS35_1908 - SecC motif-containing protein 1846 47.69 0 1929657..1930499 + 280 170683587 purU EcSMS35_1909 - formyltetrahydrofolate deformylase 1847 55.31 0 1931224..1931901 - 225 170683883 narI EcSMS35_1912 - respiratory nitrate reductase 1, gamma subunit 1848 55.13 0 1931901..1932611 - 236 170682335 narJ EcSMS35_1913 - nitrate reductase molybdenum cofactor assembly chaperone 1 1849 54.58 0 1932608..1934146 - 512 170682579 narH EcSMS35_1914 - nitrate reductase 1, beta subunit 1850 55.10 0 1934143..1937886 - 1247 170681018 narG EcSMS35_1915 - nitrate reductase 1, alpha subunit 1851 53.74 0 1938280..1939671 - 463 170682669 narK EcSMS35_1916 - nitrite extrusion protein 1 1852 38.81 -2 1939766..1939984 - 72 170681694 - EcSMS35_1917 - hypothetical protein 1853 53.31 0 1940010..1941806 + 598 170682187 narX EcSMS35_1918 - nitrate/nitrite sensor protein NarX 1854 51.61 0 1941799..1942449 + 216 170682686 narL EcSMS35_1919 - nitrate/nitrite response regulator protein NarL 1855 51.04 0 1942450..1943844 - 464 170683203 - EcSMS35_1920 - putative invasin 1856 50.85 0 1944029..1944382 + 117 170684178 - EcSMS35_1921 - dsrE family protein 1857 55.46 0 1944426..1945121 - 231 170682112 - EcSMS35_1922 - chaC protein 1858 45.45 0 1945279..1945509 - 76 170682769 - EcSMS35_1923 - chaB protein 1859 48.59 0 1945779..1946879 + 366 170683139 - EcSMS35_1924 - calcium/proton antiporter 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0