version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1707 52.08 0 1783840..1786479 - 879 170681090 - EcSMS35_1770 - hypothetical protein 1708 50.20 0 1786687..1787676 + 329 170680565 idhA EcSMS35_1771 - D-lactate dehydrogenase 1709 47.04 0 1787787..1788209 + 140 170683701 hslJ EcSMS35_1773 - heat shock protein HslJ 1710 55.56 0 1788206..1788331 - 41 170680086 - EcSMS35_1772 - putative lipoprotein 1711 38.46 -2 1788559..1788675 + 38 170680142 - EcSMS35_1774 - hypothetical protein 1712 53.53 0 1788746..1792270 + 1174 170683269 ydbK EcSMS35_1775 - pyruvate-flavodoxin oxidoreductase 1713 46.20 0 1792636..1793754 + 372 170680275 ompN EcSMS35_1776 - outer membrane protein N 1714 48.28 0 1793895..1794329 + 144 170682301 uspF EcSMS35_1777 - universal stress protein F 1715 49.04 0 1794505..1795440 + 311 170683989 - EcSMS35_1778 - PP-loop family protein 1716 51.75 0 1795569..1796942 - 457 170681328 dbpA EcSMS35_1779 - ATP-independent RNA helicase DbpA 1717 52.03 0 1797420..1798403 - 327 170682997 zntB EcSMS35_1780 - zinc transport protein ZntB 1718 47.80 0 1798598..1799890 + 430 170681443 - EcSMS35_1781 - sensory box-containing diguanylate cyclase 1719 53.55 0 1799911..1800474 - 187 170680790 - EcSMS35_1782 - Smr domain-containing protein 1720 49.50 0 1800805..1801713 - 302 170682963 abgR EcSMS35_1783 - transcriptional regulator AbgR 1721 55.15 0 1801898..1803199 + 433 170679911 abgA EcSMS35_1784 - aminobenzoyl-glutamate utilization protein A 1722 52.84 0 1803199..1804644 + 481 170682636 abgB EcSMS35_1785 - aminobenzoyl-glutamate utilization protein B 1723 49.25 0 1804675..1806207 + 510 170683317 abgT EcSMS35_1786 - aminobenzoyl-glutamate transport protein 1724 52.33 0 1806218..1806733 + 171 170681861 ogt EcSMS35_1787 - methylated-DNA-[protein]-cysteine S-methyltransferase 1725 51.26 0 1806928..1807680 + 250 170681933 fnr EcSMS35_1788 - fumarate and nitrate reduction regulatory protein 1726 50.47 0 1807832..1808782 + 316 170681219 uspE EcSMS35_1789 - universal stress protein E 1727 45.35 0 1808832..1809089 - 85 170681889 - EcSMS35_1790 - hypothetical protein 1728 43.22 -1 1809333..1810364 + 343 170679888 - EcSMS35_1791 - small conductance mechanosensitive ion channel family protein 1729 48.45 0 1810415..1812028 - 537 170680564 mppA EcSMS35_1792 - periplasmic murein peptide-binding protein 1730 46.78 0 1812365..1813264 - 299 170681201 - EcSMS35_1793 - LysR family transcriptional regulator 1731 48.43 0 1813402..1814322 + 306 170681250 - EcSMS35_1794 - hypothetical protein 1732 42.72 -1 1814393..1815031 + 212 170681263 - EcSMS35_1795 - NmrA family protein 1733 54.05 0 1815322..1816050 + 242 170681942 - EcSMS35_1797 - hypothetical protein 1734 54.24 0 1816025..1816990 - 321 170681912 - EcSMS35_1796 - mandelate racemase/muconate lactonizing enzyme family protein 1735 51.68 0 1817109..1817615 + 168 170682639 tpx EcSMS35_1798 - thiol peroxidase 1736 52.01 0 1817659..1819200 - 513 170681764 tyrR EcSMS35_1799 - transcriptional regulatory protein TyrR 1737 55.84 0 1819348..1820409 - 353 170681259 - EcSMS35_1800 - hypothetical protein 1738 55.01 0 1820406..1821803 - 465 170682550 - EcSMS35_1801 - hypothetical protein 1739 45.65 0 1821947..1822945 + 332 170682008 - EcSMS35_1802 - LacI family transcription regulator 1740 49.01 0 1822996..1823901 - 301 170683200 ompG EcSMS35_1803 - monomeric porin OmpG 1741 49.40 0 1823946..1825028 - 360 170680817 - EcSMS35_1804 - sugar ABC transporter, ATP-binding protein 1742 55.61 0 1825042..1825701 - 219 170682001 pgmB EcSMS35_1805 - beta-phosphoglucomutase 1743 53.79 0 1825698..1827965 - 755 170682507 - EcSMS35_1806 - glycosy hydrolase family protein 1744 55.46 0 1827962..1829005 - 347 170684205 - EcSMS35_1807 - gfo/idh/mocA family protein 1745 52.34 0 1829027..1829815 - 262 170683456 - EcSMS35_1808 - AP endonuclease 1746 55.94 0 1829833..1830885 - 350 170681445 - EcSMS35_1809 - zinc-binding dehydrogenase family oxidoreductase 1747 52.79 0 1830916..1831758 - 280 170682092 - EcSMS35_1810 - putative sugar ABC transporter, permease protein 1748 53.40 0 1831745..1832626 - 293 170682754 - EcSMS35_1811 - putative sugar ABC transporter, permease protein 1749 51.35 0 1832647..1833939 - 430 170683434 - EcSMS35_1812 - putative sugar ABC transporter, periplasmic sugar-binding protein 1750 44.23 -1 1833953..1835632 - 559 170679871 - EcSMS35_1813 - alpha amylase family protein 1751 51.43 0 1835846..1836160 - 104 170682062 pspE EcSMS35_1814 - phage shock protein E 1752 55.86 0 1836235..1836456 - 73 170683517 pspD EcSMS35_1815 - phage shock protein PspD 1753 49.72 0 1836465..1836824 - 119 170684285 pspC EcSMS35_1816 - phage shock protein C 1754 48.00 0 1836824..1837048 - 74 170682840 pspB EcSMS35_1817 - phage shock protein B 1755 49.63 0 1837102..1837770 - 222 170680978 pspA EcSMS35_1818 - phage shock protein A 1756 51.64 0 1837937..1838914 + 325 170684159 pspF EcSMS35_1819 - sigma-54 dependent transcriptional regulator PspF 1757 57.58 +1 1839045..1840310 - 421 170682308 gabT1 EcSMS35_1820 - 4-aminobutyrate transaminase 1758 58.47 +1 1840348..1841628 - 426 170679683 puuB EcSMS35_1821 - gamma-glutamylputrescine oxidoreductase 1759 58.00 +1 1841630..1843117 - 495 170680173 puuC EcSMS35_1822 - gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase 1760 50.72 0 1843267..1843824 - 185 170680966 puuR EcSMS35_1823 - transcriptional regulator PuuR 1761 53.52 0 1843851..1844603 - 250 170679609 puuD EcSMS35_1824 - gamma-glutamyl-gamma-aminobutyrate hydrolase 1762 53.56 0 1844827..1846245 + 472 170682225 puuA EcSMS35_1825 - glutamate--putrescine ligase 1763 53.61 0 1846548..1847933 + 461 170682974 - EcSMS35_1826 - amino acid permease 1764 48.78 0 1848067..1848312 + 81 170683601 - EcSMS35_1827 - hypothetical protein 1765 54.14 0 1848649..1850268 + 539 170684301 sapA EcSMS35_1828 - peptide ABC transporter, periplasmic peptide-binding protein 1766 50.62 0 1850265..1851230 + 321 170683242 sapB EcSMS35_1829 - peptide ABC transporter, permease protein SapB 1767 57.13 +1 1851217..1852107 + 296 170684277 sapC EcSMS35_1830 - peptide ABC transporter, permease protein SapC 1768 51.06 0 1852107..1853099 + 330 170679617 sapD EcSMS35_1831 - peptide ABC transporter, ATP-binding protein SapD 1769 51.55 0 1853101..1853907 + 268 170680270 sapF EcSMS35_1832 - peptide transport system, ATP-binding protein SapF 1770 49.48 0 1853956..1855119 - 387 170680921 eefD EcSMS35_1833 - multidrug efflux transport protein EefD 1771 53.78 0 1855128..1856501 - 457 170681888 eefC EcSMS35_1834 - multidrug efflux outer membrane protein EefC 1772 51.93 0 1856505..1859612 - 1035 170683789 eefB EcSMS35_1835 - multidrug efflux transport protein EefB 1773 51.52 0 1859612..1860733 - 373 170683115 eefA EcSMS35_1836 - multidrug efflux transport protein EefA 1774 47.97 0 1860882..1861448 - 188 170681981 eefR EcSMS35_1837 - transcriptional regulator EefR 1775 42.55 -1 1861624..1861764 - 46 170683953 - EcSMS35_1838 - hypothetical protein 1776 53.74 0 1861926..1862714 + 262 170680950 fabI EcSMS35_1839 - enoyl-(acyl-carrier-protein) reductase (NADH) 1777 50.53 0 1862859..1863986 + 375 170682969 - EcSMS35_1840 - hypothetical protein 1778 53.39 0 1864054..1865988 + 644 170681733 rnb EcSMS35_1841 - exoribonuclease II 1779 48.54 0 1866223..1868208 + 661 170681077 - EcSMS35_1842 - sensory box-containing diguanylate cyclase/cyclic diguanylate phosphodiesterase 1780 47.70 0 1868356..1868529 + 57 170680708 - EcSMS35_1843 - hypothetical protein 1781 49.33 0 1868619..1869368 + 249 170683876 - EcSMS35_1844 - DeoR family transcriptional regulator 1782 52.51 0 1869637..1869855 + 72 170681513 - EcSMS35_1845 - osmotically inducible lipoprotein B 1783 50.30 0 1869981..1870310 - 109 170680982 - EcSMS35_1846 - putative translation initation factor SUI1 1784 53.25 0 1870307..1871044 - 245 170680162 pyrF EcSMS35_1847 - orotidine 5'-phosphate decarboxylase 1785 48.37 0 1871060..1871212 + 50 170679727 - EcSMS35_1848 - hypothetical protein 1786 52.31 0 1871236..1872405 - 389 170683676 - EcSMS35_1849 - TPR repeat-containing protein 1787 49.84 0 1872412..1872720 - 102 170680512 - EcSMS35_1850 - hypothetical protein 1788 49.93 0 1872869..1873633 - 254 170682357 pgpB EcSMS35_1851 - phosphatidylglycerophosphatase B 1789 49.92 0 1873803..1874393 + 196 170683390 ribA EcSMS35_1852 - GTP cyclohydrolase II 1790 52.88 0 1874457..1877132 - 891 170681003 acnA EcSMS35_1853 - aconitate hydratase 1 1791 45.24 0 1877452..1877619 - 55 170681124 - EcSMS35_1854 - hypothetical protein 1792 48.84 0 1877622..1877750 - 42 170680282 - EcSMS35_1855 - hypothetical protein 1793 48.92 0 1878081..1879055 - 324 170679623 cysB EcSMS35_1856 - HTH-type transcriptional regulator CysB 1794 51.66 0 1879264..1881861 - 865 170682590 topA EcSMS35_1857 - DNA topoisomerase I 1795 47.62 0 1882241..1882492 + 83 170681925 - EcSMS35_1858 - hypothetical protein 1796 50.67 0 1882528..1883577 - 349 170682481 sohB EcSMS35_1859 - S49 family peptidase 1797 52.17 0 1883797..1884555 + 252 170681806 - EcSMS35_1860 - short chain dehydrogenase/reductase family oxidoreductase 1798 50.08 0 1884552..1885142 + 196 170680960 btuR EcSMS35_1861 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1799 34.95 -2 1885195..1885503 - 102 170680559 - EcSMS35_1862 - hypothetical protein 1800 37.82 -2 1885514..1886515 - 333 170679656 - EcSMS35_1863 - putative lipoprotein 1801 53.88 0 1886685..1887560 - 291 170682451 rluB EcSMS35_1864 - ribosomal large subunit pseudouridine synthase B 1802 47.15 0 1887771..1889666 - 631 170681982 - EcSMS35_1865 - hypothetical protein 1803 49.16 0 1889694..1890350 - 218 170681810 - EcSMS35_1866 - Sua5/YciO/YrdC/YwlC family protein 1804 53.97 0 1890311..1891192 - 293 170681023 - EcSMS35_1867 - putative phosphoesterase 1805 54.06 0 1891466..1893028 + 520 170680165 trpE EcSMS35_1868 - anthranilate synthase, component I 1806 56.20 +1 1893028..1894623 + 531 170679698 trpD EcSMS35_1869 - anthranilate synthase, component II 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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