version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1616 46.80 0 1676947..1679730 + 927 170681032 pqqL EcSMS35_1679 - M16B family peptidase 1617 53.89 0 1680092..1681492 + 466 170680042 gadA EcSMS35_1680 - glutamate decarboxylase GadA 1618 48.24 0 1681648..1683183 + 511 170679725 gadC EcSMS35_1681 - glutamate:gamma aminobutyrate antiporter 1619 52.92 0 1683419..1684633 + 404 170683453 - EcSMS35_1682 - putative lipoprotein 1620 44.69 -1 1685009..1686391 + 460 170683103 - EcSMS35_1683 - diguanylate cyclase 1621 50.21 0 1686392..1688815 + 807 170683445 dos EcSMS35_1684 - heme-regulated cyclic AMP phosphodiesterase 1622 52.75 0 1689073..1689654 + 193 170680875 ddpX EcSMS35_1685 - D-alanyl-D-alanine dipeptidase 1623 50.29 0 1689668..1691218 + 516 170681069 - EcSMS35_1686 - putative ABC transporter periplasmic-binding protein yddS precursor 1624 55.43 0 1691220..1692242 + 340 170681904 yddR EcSMS35_1687 - inner membrane ABC transporter permease protein yddR 1625 54.07 0 1692239..1693135 + 298 170681230 yddQ EcSMS35_1688 - inner membrane ABC transporter permease protein yddQ 1626 54.20 0 1693132..1694118 + 328 170681718 - EcSMS35_1689 - ABC transporter, ATP-binding protein 1627 53.18 0 1694111..1695037 + 308 170680211 - EcSMS35_1690 - putative ABC transport system ATP-binding protein 1628 47.86 0 1695093..1695443 - 116 170680714 osmC EcSMS35_1691 - peroxiredoxin OsmC 1629 34.75 -2 1695561..1695701 - 46 170683270 - EcSMS35_1692 - hypothetical protein 1630 45.83 0 1695868..1696083 + 71 170683795 - EcSMS35_1693 - protein bdm 1631 44.20 -1 1696185..1696322 + 45 170682250 - EcSMS35_1694 - 30S ribosomal subunit S24 1632 51.88 0 1696479..1698176 + 565 170682113 sfcA EcSMS35_1695 - malate dehydrogenase (oxaloacetate-decarboxylating) 1633 52.92 0 1698310..1699320 + 336 170681593 - EcSMS35_1696 - zinc-binding dehydrogenase family oxidoreductase 1634 52.63 0 1699466..1699750 + 94 170680944 - EcSMS35_1697 - addiction module antidote protein 1635 50.31 0 1699801..1700454 - 217 170682255 fdnI EcSMS35_1698 - formate dehydrogenase, gamma subunit 1636 54.92 0 1700447..1701331 - 294 170681880 fdnH EcSMS35_1699 - formate dehydrogenase, nitrate-inducible, iron-sulfur subunit 1637 54.13 0 1701344..1704391 - 1015 170684244 fdnG EcSMS35_1700 - formate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing 1638 50.11 0 1704623..1705504 + 293 170680186 - EcSMS35_1701 - hypothetical protein 1639 44.14 -1 1705762..1706862 + 366 170679684 - EcSMS35_1702 - porin family protein 1640 35.32 -2 1707032..1708291 + 419 170680907 - EcSMS35_1703 - hypothetical protein 1641 33.65 -2 1708354..1709610 + 418 170683898 - EcSMS35_1704 - hypothetical protein 1642 49.39 0 1709920..1711308 + 462 170682066 narU EcSMS35_1705 - nitrite extrusion protein 2 1643 54.72 0 1711403..1715143 + 1246 170682586 narZ EcSMS35_1706 - nitrate reductase 2, alpha subunit 1644 54.37 0 1715140..1716684 + 514 170683492 narY EcSMS35_1707 - nitrate reductase 2, beta subunit 1645 55.60 0 1716684..1717379 + 231 170683975 narW EcSMS35_1708 - nitrate reductase molybdenum cofactor assembly chaperone 2 1646 51.69 0 1717376..1718056 + 226 170681973 narV EcSMS35_1709 - respiratory nitrate reductase 2, gamma subunit 1647 51.34 0 1718136..1719029 + 297 170682607 - EcSMS35_1710 - PhzF family phenazine biosynthesis protein 1648 51.18 0 1719125..1719970 - 281 170681423 - EcSMS35_1711 - N-hydroxyarylamine O-acetyltransferase 1649 52.11 0 1720145..1720714 + 189 170681909 - EcSMS35_1712 - flavin reductase domain-containing protein 1650 43.42 -1 1720718..1720945 - 75 170679957 - EcSMS35_1713 - tautomerase enzyme family protein 1651 45.47 0 1721250..1723226 + 658 170683013 - EcSMS35_1714 - metallo-beta-lactamase family protein 1652 43.48 -1 1723202..1723339 + 45 170684171 - EcSMS35_1715 - hypothetical protein 1653 43.05 -1 1723321..1724370 + 349 170679992 - EcSMS35_1716 - diguanylate cyclase 1654 48.22 0 1724371..1724988 - 205 170679756 - EcSMS35_1717 - hypothetical protein 1655 52.67 0 1725255..1726754 + 499 170681095 ansP EcSMS35_1718 - L-asparagine permease 1656 49.34 0 1726867..1727928 - 353 170680680 - EcSMS35_1719 - hypothetical protein 1657 51.36 0 1728170..1730272 + 700 170680750 - EcSMS35_1720 - TonB-dependent receptor 1658 43.09 -1 1730308..1730973 - 221 170681762 - EcSMS35_1721 - GntR family transcriptional regulator 1659 40.15 -1 1730972..1731103 + 43 170682411 - EcSMS35_1722 - hypothetical protein 1660 38.89 -2 1731072..1731197 + 41 170683824 - EcSMS35_1724 - hypothetical protein 1661 52.89 0 1731172..1732209 - 345 170682763 - EcSMS35_1723 - zinc-binding dehydrogenase family oxidoreductase 1662 52.22 0 1732390..1732908 + 172 170680307 - EcSMS35_1725 - acetyltransferase 1663 52.00 0 1732905..1733354 + 149 170679651 - EcSMS35_1726 - hypothetical protein 1664 53.85 0 1733355..1733588 - 77 170681585 - EcSMS35_1727 - hypothetical protein 1665 44.98 -1 1733674..1733922 - 82 170681752 - EcSMS35_1728 - hypothetical protein 1666 39.32 -2 1734121..1734237 + 38 170682039 - EcSMS35_1730 - hypothetical protein 1667 53.19 0 1734234..1735658 - 474 170681515 ydcW EcSMS35_1729 - gamma-aminobutyraldehyde dehydrogenase 1668 53.58 0 1735680..1736474 - 264 170682582 ydcV EcSMS35_1731 - ABC transporter, permease protein 1669 53.93 0 1736464..1737405 - 313 170683660 ydcU EcSMS35_1732 - ABC transporter, permease protein 1670 54.54 0 1737406..1738419 - 337 170680113 ydcT EcSMS35_1733 - ABC transporter, ATP-binding protein 1671 52.71 0 1738437..1739582 - 381 170681458 ydcS EcSMS35_1734 - ABC transporter, periplasmic substrate-binding protein 1672 50.68 0 1739827..1741233 - 468 170682466 - EcSMS35_1735 - GntR family transcriptional regulator 1673 45.66 0 1741312..1741749 - 145 170682851 - EcSMS35_1736 - hypothetical protein 1674 39.84 -1 1741993..1742115 + 40 170681116 - EcSMS35_1737 - hypothetical protein 1675 51.46 0 1742232..1742402 + 56 170681462 - EcSMS35_1738 - hypothetical protein 1676 50.97 0 1742494..1744455 - 653 170680392 - EcSMS35_1739 - U32 family peptidase 1677 49.16 0 1744528..1745064 - 178 170680755 - EcSMS35_1740 - DNA-binding protein 1678 52.47 0 1745063..1746055 + 330 170684188 - EcSMS35_1742 - benzoate transporter 1679 53.88 0 1746052..1747380 - 442 170683807 - EcSMS35_1741 - IS4 transposase 1680 53.41 0 1747487..1747765 + 92 170683107 - EcSMS35_1743 - benzoate membrane transport protein 1681 44.25 -1 1747800..1748468 - 222 170680356 - EcSMS35_1744 - putative lipoprotein 1682 46.97 0 1748771..1749364 - 197 170680992 tehB EcSMS35_1745 - tellurite resistance protein TehB 1683 53.37 0 1749361..1750353 - 330 170682405 tehA EcSMS35_1746 - tellurite resistance protein TehA 1684 48.42 0 1750477..1751457 + 326 170680166 - EcSMS35_1748 - hypothetical protein 1685 43.52 -1 1751449..1751988 - 179 170679791 rimL EcSMS35_1747 - ribosomal-protein-serine acetyltransferase 1686 40.89 -1 1752051..1752275 - 74 170684128 - EcSMS35_1749 - hypothetical protein 1687 51.54 0 1752415..1754034 - 539 170679744 - EcSMS35_1750 - periplasmic glucan biosynthesis protein, MdoG 1688 52.60 0 1754295..1755638 - 447 170683072 - EcSMS35_1751 - hypothetical protein 1689 50.43 0 1755855..1756778 + 307 170683406 - EcSMS35_1752 - LysR family transcriptional regulator 1690 51.31 0 1756817..1758457 - 546 170682410 trg EcSMS35_1753 - methyl-accepting chemotaxis protein III 1691 45.40 0 1759077..1759250 - 57 170683936 - EcSMS35_1754 - hypothetical protein 1692 46.56 0 1759495..1760061 - 188 170679749 - EcSMS35_1755 - nickel-dependent hydrogenase, b-type cytochrome subunit 1693 47.90 0 1760214..1761215 + 333 170680304 gapC EcSMS35_1756 - glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 1694 50.90 0 1761256..1762695 - 479 170680762 aldA EcSMS35_1757 - aldehyde dehydrogenase A 1695 51.44 0 1762892..1763692 - 266 170681330 - EcSMS35_1758 - hypothetical protein 1696 53.24 0 1763965..1767867 - 1300 170684173 hrpA EcSMS35_1759 - ATP-dependent helicase HrpA 1697 51.65 0 1768068..1768673 + 201 170682348 azoR EcSMS35_1760 - FMN-dependent NADH-azoreductase 1698 49.27 0 1768727..1770019 - 430 170680460 - EcSMS35_1761 - PAP2 family protein 1699 50.46 0 1770033..1771790 - 585 170683337 - EcSMS35_1762 - hypothetical protein 1700 44.37 -1 1771806..1772702 - 298 170681478 cdsA2 EcSMS35_1763 - phosphatidate cytidylyltransferase 1701 44.72 -1 1772702..1773307 - 201 170680517 - EcSMS35_1764 - CDP-alcohol phosphatidyltransferase family protein 1702 43.17 -1 1773477..1775783 - 768 170682391 - EcSMS35_1765 - hypothetical protein 1703 53.08 0 1775847..1776707 - 286 170683747 - EcSMS35_1766 - aldo/keto reductase family oxidoreductase 1704 51.59 0 1776915..1782869 - 1984 170680870 - EcSMS35_1767 - putative autotransporter 1705 42.90 -1 1783327..1783650 - 107 170682611 - EcSMS35_1768 - hypothetical protein 1706 44.09 -1 1783658..1783843 - 61 170679825 - EcSMS35_1769 - putative lipoprotein 1707 52.08 0 1783840..1786479 - 879 170681090 - EcSMS35_1770 - hypothetical protein 1708 50.20 0 1786687..1787676 + 329 170680565 idhA EcSMS35_1771 - D-lactate dehydrogenase 1709 47.04 0 1787787..1788209 + 140 170683701 hslJ EcSMS35_1773 - heat shock protein HslJ 1710 55.56 0 1788206..1788331 - 41 170680086 - EcSMS35_1772 - putative lipoprotein 1711 38.46 -2 1788559..1788675 + 38 170680142 - EcSMS35_1774 - hypothetical protein 1712 53.53 0 1788746..1792270 + 1174 170683269 ydbK EcSMS35_1775 - pyruvate-flavodoxin oxidoreductase 1713 46.20 0 1792636..1793754 + 372 170680275 ompN EcSMS35_1776 - outer membrane protein N 1714 48.28 0 1793895..1794329 + 144 170682301 uspF EcSMS35_1777 - universal stress protein F 1715 49.04 0 1794505..1795440 + 311 170683989 - EcSMS35_1778 - PP-loop family protein 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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