version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1580 49.59 0 1632023..1632145 + 40 170681467 - EcSMS35_1643 - hypothetical protein 1581 50.83 0 1632182..1632301 + 39 170681472 - EcSMS35_1645 - hypothetical protein 1582 39.70 -1 1632255..1633370 - 371 170680980 - EcSMS35_1644 - hypothetical protein 1583 54.20 0 1633448..1634329 - 293 170682090 - EcSMS35_1646 - LysR family transcriptional regulator 1584 53.06 0 1634430..1635818 + 462 170684086 - EcSMS35_1647 - aldehyde dehydrogenase (NAD) family protein 1585 51.56 0 1635882..1636808 + 308 170683424 glsA2 EcSMS35_1648 - glutaminase 1586 50.28 0 1636808..1637167 + 119 170684186 - EcSMS35_1649 - hypothetical protein 1587 48.56 0 1637306..1638724 + 472 170683666 - EcSMS35_1650 - diguanylate cyclase 1588 51.79 0 1638952..1640403 + 483 170679585 uxaB EcSMS35_1651 - tagaturonate reductase 1589 48.31 0 1640600..1641514 + 304 170681385 - EcSMS35_1652 - hypothetical protein 1590 54.15 0 1641518..1642276 - 252 170681176 tam EcSMS35_1653 - trans-aconitate 2-methyltransferase 1591 46.74 0 1642333..1642623 - 96 170682706 lsrG EcSMS35_1654 - lsrG protein 1592 49.89 0 1642647..1643522 - 291 170682465 lsrF EcSMS35_1655 - lsrF protein 1593 49.66 0 1643549..1644571 - 340 170683902 lsrB EcSMS35_1656 - autoinducer-2 ABC transporter, periplasmic autoinducer-2-binding protein LsrB 1594 53.27 0 1644583..1645575 - 330 170680972 lsrD EcSMS35_1657 - autoinducer-2 ABC transporter, permease protein LsrD 1595 53.84 0 1645575..1646603 - 342 170681527 lsrC EcSMS35_1658 - autoinducer-2 ABC transporter, permease protein LsrC 1596 53.26 0 1646597..1648132 - 511 170679722 lsrA EcSMS35_1659 - autoinducer-2 ABC transporter, ATP-binding protein LsrA 1597 50.10 0 1648381..1649334 + 317 170680199 lsrR EcSMS35_1660 - transcriptional repressor LsrR 1598 52.54 0 1649413..1651005 + 530 170683577 lsrK EcSMS35_1661 - autoinducer-2 kinase 1599 50.07 0 1651535..1656415 + 1626 170684085 - EcSMS35_1662 - pertactin family protein 1600 39.84 -1 1656724..1656846 + 40 170682223 - EcSMS35_1663 - hypothetical protein 1601 46.99 0 1657614..1658177 + 187 170682216 - EcSMS35_1664 - fimbrial protein 1602 44.87 -1 1658540..1659250 + 236 170683705 - EcSMS35_1665 - periplasmic pilus chaperone family protein 1603 44.34 -1 1659328..1661943 + 871 170679788 - EcSMS35_1666 - fimbrial usher family protein 1604 44.26 -1 1661957..1662487 + 176 170684138 - EcSMS35_1667 - protein FimF-like protein 1605 46.45 0 1662500..1663147 + 215 170682655 - EcSMS35_1669 - protein FimG-like protein 1606 54.97 0 1662987..1663892 - 301 170684099 - EcSMS35_1668 - IS2 transposase orfB 1607 50.61 0 1663850..1664260 - 136 170683416 - EcSMS35_1670 - IS2 transposase orfA 1608 44.04 -1 1664399..1665313 + 304 170683036 - EcSMS35_1671 - protein FimH-like protein 1609 49.82 0 1665652..1667931 + 759 170682379 - EcSMS35_1672 - molybdopterin oxidoreductase, alpha subunit 1610 38.38 -2 1668179..1668376 + 65 170680802 - EcSMS35_1673 - hypothetical protein 1611 40.29 -1 1668451..1669212 + 253 170680428 - EcSMS35_1674 - AraC family transcriptional regulator 1612 44.51 -1 1669676..1671295 + 539 170679774 - EcSMS35_1675 - sulfatase 1613 38.95 -2 1671347..1672504 + 385 170682242 - EcSMS35_1676 - radical SAM domain-containing protein 1614 43.18 -1 1672795..1674480 + 561 170682224 - EcSMS35_1677 - inner membrane ABC transporter ATP-binding protein 1615 46.06 0 1674518..1676890 + 790 170681386 - EcSMS35_1678 - TonB-dependent receptor 1616 46.80 0 1676947..1679730 + 927 170681032 pqqL EcSMS35_1679 - M16B family peptidase 1617 53.89 0 1680092..1681492 + 466 170680042 gadA EcSMS35_1680 - glutamate decarboxylase GadA 1618 48.24 0 1681648..1683183 + 511 170679725 gadC EcSMS35_1681 - glutamate:gamma aminobutyrate antiporter 1619 52.92 0 1683419..1684633 + 404 170683453 - EcSMS35_1682 - putative lipoprotein 1620 44.69 -1 1685009..1686391 + 460 170683103 - EcSMS35_1683 - diguanylate cyclase 1621 50.21 0 1686392..1688815 + 807 170683445 dos EcSMS35_1684 - heme-regulated cyclic AMP phosphodiesterase 1622 52.75 0 1689073..1689654 + 193 170680875 ddpX EcSMS35_1685 - D-alanyl-D-alanine dipeptidase 1623 50.29 0 1689668..1691218 + 516 170681069 - EcSMS35_1686 - putative ABC transporter periplasmic-binding protein yddS precursor 1624 55.43 0 1691220..1692242 + 340 170681904 yddR EcSMS35_1687 - inner membrane ABC transporter permease protein yddR 1625 54.07 0 1692239..1693135 + 298 170681230 yddQ EcSMS35_1688 - inner membrane ABC transporter permease protein yddQ 1626 54.20 0 1693132..1694118 + 328 170681718 - EcSMS35_1689 - ABC transporter, ATP-binding protein 1627 53.18 0 1694111..1695037 + 308 170680211 - EcSMS35_1690 - putative ABC transport system ATP-binding protein 1628 47.86 0 1695093..1695443 - 116 170680714 osmC EcSMS35_1691 - peroxiredoxin OsmC 1629 34.75 -2 1695561..1695701 - 46 170683270 - EcSMS35_1692 - hypothetical protein 1630 45.83 0 1695868..1696083 + 71 170683795 - EcSMS35_1693 - protein bdm 1631 44.20 -1 1696185..1696322 + 45 170682250 - EcSMS35_1694 - 30S ribosomal subunit S24 1632 51.88 0 1696479..1698176 + 565 170682113 sfcA EcSMS35_1695 - malate dehydrogenase (oxaloacetate-decarboxylating) 1633 52.92 0 1698310..1699320 + 336 170681593 - EcSMS35_1696 - zinc-binding dehydrogenase family oxidoreductase 1634 52.63 0 1699466..1699750 + 94 170680944 - EcSMS35_1697 - addiction module antidote protein 1635 50.31 0 1699801..1700454 - 217 170682255 fdnI EcSMS35_1698 - formate dehydrogenase, gamma subunit 1636 54.92 0 1700447..1701331 - 294 170681880 fdnH EcSMS35_1699 - formate dehydrogenase, nitrate-inducible, iron-sulfur subunit 1637 54.13 0 1701344..1704391 - 1015 170684244 fdnG EcSMS35_1700 - formate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing 1638 50.11 0 1704623..1705504 + 293 170680186 - EcSMS35_1701 - hypothetical protein 1639 44.14 -1 1705762..1706862 + 366 170679684 - EcSMS35_1702 - porin family protein 1640 35.32 -2 1707032..1708291 + 419 170680907 - EcSMS35_1703 - hypothetical protein 1641 33.65 -2 1708354..1709610 + 418 170683898 - EcSMS35_1704 - hypothetical protein 1642 49.39 0 1709920..1711308 + 462 170682066 narU EcSMS35_1705 - nitrite extrusion protein 2 1643 54.72 0 1711403..1715143 + 1246 170682586 narZ EcSMS35_1706 - nitrate reductase 2, alpha subunit 1644 54.37 0 1715140..1716684 + 514 170683492 narY EcSMS35_1707 - nitrate reductase 2, beta subunit 1645 55.60 0 1716684..1717379 + 231 170683975 narW EcSMS35_1708 - nitrate reductase molybdenum cofactor assembly chaperone 2 1646 51.69 0 1717376..1718056 + 226 170681973 narV EcSMS35_1709 - respiratory nitrate reductase 2, gamma subunit 1647 51.34 0 1718136..1719029 + 297 170682607 - EcSMS35_1710 - PhzF family phenazine biosynthesis protein 1648 51.18 0 1719125..1719970 - 281 170681423 - EcSMS35_1711 - N-hydroxyarylamine O-acetyltransferase 1649 52.11 0 1720145..1720714 + 189 170681909 - EcSMS35_1712 - flavin reductase domain-containing protein 1650 43.42 -1 1720718..1720945 - 75 170679957 - EcSMS35_1713 - tautomerase enzyme family protein 1651 45.47 0 1721250..1723226 + 658 170683013 - EcSMS35_1714 - metallo-beta-lactamase family protein 1652 43.48 -1 1723202..1723339 + 45 170684171 - EcSMS35_1715 - hypothetical protein 1653 43.05 -1 1723321..1724370 + 349 170679992 - EcSMS35_1716 - diguanylate cyclase 1654 48.22 0 1724371..1724988 - 205 170679756 - EcSMS35_1717 - hypothetical protein 1655 52.67 0 1725255..1726754 + 499 170681095 ansP EcSMS35_1718 - L-asparagine permease 1656 49.34 0 1726867..1727928 - 353 170680680 - EcSMS35_1719 - hypothetical protein 1657 51.36 0 1728170..1730272 + 700 170680750 - EcSMS35_1720 - TonB-dependent receptor 1658 43.09 -1 1730308..1730973 - 221 170681762 - EcSMS35_1721 - GntR family transcriptional regulator 1659 40.15 -1 1730972..1731103 + 43 170682411 - EcSMS35_1722 - hypothetical protein 1660 38.89 -2 1731072..1731197 + 41 170683824 - EcSMS35_1724 - hypothetical protein 1661 52.89 0 1731172..1732209 - 345 170682763 - EcSMS35_1723 - zinc-binding dehydrogenase family oxidoreductase 1662 52.22 0 1732390..1732908 + 172 170680307 - EcSMS35_1725 - acetyltransferase 1663 52.00 0 1732905..1733354 + 149 170679651 - EcSMS35_1726 - hypothetical protein 1664 53.85 0 1733355..1733588 - 77 170681585 - EcSMS35_1727 - hypothetical protein 1665 44.98 -1 1733674..1733922 - 82 170681752 - EcSMS35_1728 - hypothetical protein 1666 39.32 -2 1734121..1734237 + 38 170682039 - EcSMS35_1730 - hypothetical protein 1667 53.19 0 1734234..1735658 - 474 170681515 ydcW EcSMS35_1729 - gamma-aminobutyraldehyde dehydrogenase 1668 53.58 0 1735680..1736474 - 264 170682582 ydcV EcSMS35_1731 - ABC transporter, permease protein 1669 53.93 0 1736464..1737405 - 313 170683660 ydcU EcSMS35_1732 - ABC transporter, permease protein 1670 54.54 0 1737406..1738419 - 337 170680113 ydcT EcSMS35_1733 - ABC transporter, ATP-binding protein 1671 52.71 0 1738437..1739582 - 381 170681458 ydcS EcSMS35_1734 - ABC transporter, periplasmic substrate-binding protein 1672 50.68 0 1739827..1741233 - 468 170682466 - EcSMS35_1735 - GntR family transcriptional regulator 1673 45.66 0 1741312..1741749 - 145 170682851 - EcSMS35_1736 - hypothetical protein 1674 39.84 -1 1741993..1742115 + 40 170681116 - EcSMS35_1737 - hypothetical protein 1675 51.46 0 1742232..1742402 + 56 170681462 - EcSMS35_1738 - hypothetical protein 1676 50.97 0 1742494..1744455 - 653 170680392 - EcSMS35_1739 - U32 family peptidase 1677 49.16 0 1744528..1745064 - 178 170680755 - EcSMS35_1740 - DNA-binding protein 1678 52.47 0 1745063..1746055 + 330 170684188 - EcSMS35_1742 - benzoate transporter 1679 53.88 0 1746052..1747380 - 442 170683807 - EcSMS35_1741 - IS4 transposase 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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