version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 108 51.53 0 119960..121003 + 347 170683674 guaC EcSMS35_0108 - guanosine monophosphate reductase 109 51.95 0 121038..122240 - 400 170681709 pilC EcSMS35_0109 - type IV pilus assembly protein PilC 110 53.46 0 122230..123615 - 461 170681105 hofB EcSMS35_0110 - GspE family protein HofB 111 52.61 0 123625..124065 - 146 170682801 pilA EcSMS35_0111 - type 4 pilus subunit PilA 112 53.36 0 124268..125161 - 297 170681997 nadC EcSMS35_0112 - nicotinate-nucleotide diphosphorylase (carboxylating) 113 54.53 0 125249..125800 + 183 170683851 ampD EcSMS35_0113 - N-acetylmuramoyl-L-alanine amidase 114 51.70 0 125797..126651 + 284 170680046 ampE EcSMS35_0114 - protein AmpE 115 53.10 0 126694..128064 - 456 170680377 aroP EcSMS35_0115 - aromatic amino acid transport protein AroP 116 48.88 0 128593..130374 + 593 170680765 - EcSMS35_0116 - putative S-type colicin 117 36.84 -2 130377..130661 + 94 170681742 - EcSMS35_0117 - putative colicin immunity protein 118 36.67 -2 130829..131068 + 79 170682972 - EcSMS35_0118 - putative colicin 119 38.49 -2 131069..131359 + 96 170681564 - EcSMS35_0119 - putative colicin immunity protein 120 35.98 -2 131526..131714 + 62 170682281 - EcSMS35_0120 - putative colicin 121 32.32 -2 131762..132058 + 98 170683102 - EcSMS35_0121 - putative colicin immunity protein 122 55.69 0 132514..133278 + 254 170679674 - EcSMS35_0123 - GntR family transcriptional regulator 123 38.80 -2 133275..133457 - 60 170683479 - EcSMS35_0122 - hypothetical protein 124 53.23 0 133439..136102 + 887 170680617 aceE EcSMS35_0124 - pyruvate dehydrogenase (acetyl-transferring), homodimeric type 125 55.04 0 136117..138009 + 630 170680247 aceF EcSMS35_0125 - dihydrolipoyllysine-residue acetyltransferase 126 52.28 0 138154..139641 + 495 170679767 lpdA EcSMS35_0126 - dihydrolipoamide dehydrogenase 127 53.24 0 139712..141469 - 585 170684092 - EcSMS35_0127 - hypothetical protein 128 55.32 0 141902..144421 + 839 170683451 acnB EcSMS35_0128 - aconitate hydratase 2 129 52.07 0 144596..144958 + 120 170683045 - EcSMS35_0129 - hypothetical protein 130 46.54 0 144996..145790 - 264 170682621 speD EcSMS35_0130 - S-adenosylmethionine decarboxylase 131 50.87 0 145806..146672 - 288 170683238 speE EcSMS35_0131 - spermidine synthase 132 49.71 0 146778..147125 - 115 170680607 - EcSMS35_0132 - hypothetical protein 133 54.16 0 147291..148841 + 516 170682517 cueO EcSMS35_0133 - copper oxidase CueO 134 55.37 0 148888..151278 - 796 170683523 gcd EcSMS35_0134 - quinoprotein glucose dehydrogenase 135 50.09 0 151484..152020 + 178 170680010 hpt EcSMS35_0135 - hypoxanthine phosphoribosyltransferase 136 50.83 0 152061..152723 - 220 170680677 can EcSMS35_0136 - carbonic anhydrase 137 48.54 0 152832..153758 + 308 170681249 - EcSMS35_0137 - ABC transporter, ATP-binding protein 138 51.23 0 153755..154525 + 256 170679696 - EcSMS35_0138 - ABC transporter, permease protein 139 50.11 0 154630..155070 + 146 170682787 - EcSMS35_0139 - PTS system IIA component domain-containing protein 140 48.37 0 155134..156363 + 409 170680801 - EcSMS35_0140 - polysaccharide deacetylase domain-containing protein 141 53.54 0 156367..156747 - 126 170683804 panD EcSMS35_0141 - aspartate 1-decarboxylase 142 48.86 0 157021..157941 + 306 170682409 - EcSMS35_0142 - ISNCY family transposase 143 44.91 -1 158010..158225 + 71 170681773 - EcSMS35_0143 - hypothetical protein 144 52.35 0 158307..159158 - 283 170679778 panC EcSMS35_0144 - pantoate--beta-alanine ligase 145 54.72 0 159170..159964 - 264 170682456 panB EcSMS35_0145 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 146 38.60 -2 160076..161347 - 423 170682836 - EcSMS35_0146 - putative fimbrial protein 147 41.04 -1 161401..161997 - 198 170680339 - EcSMS35_0147 - putative fimbrial protein 148 43.56 -1 162024..162629 - 201 170681181 - EcSMS35_0148 - hypothetical protein 149 41.98 -1 162644..163210 - 188 170683790 - EcSMS35_0149 - fimbrial protein 150 44.21 -1 163230..165830 - 866 170679612 htrE EcSMS35_0150 - outer membrane usher protein HtrE 151 45.88 0 165865..166605 - 246 170680970 - EcSMS35_0151 - periplasmic pilus chaperone family protein 152 44.96 -1 166703..167287 - 194 170681382 - EcSMS35_0152 - fimbrial protein 153 49.17 0 167658..168137 - 159 170680561 folK EcSMS35_0153 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 154 55.97 0 168134..169498 - 454 170680324 pcnB EcSMS35_0154 - poly(A) polymerase 155 52.43 0 169591..170517 - 308 170683546 gluQ EcSMS35_0155 - glutamyl-Q tRNA(Asp) synthetase 156 52.85 0 170554..171009 - 151 170679800 dksA EcSMS35_0156 - RNA polymerase-binding protein DksA 157 49.22 0 171187..171891 - 234 170682246 sfsA EcSMS35_0157 - sugar fermentation stimulation protein 158 55.56 0 171906..172436 - 176 170684250 ligT EcSMS35_0158 - 2'-5' RNA ligase 159 56.97 +1 172465..174939 + 824 170681199 hrpB EcSMS35_0159 - ATP-dependent helicase HrpB 160 55.35 0 175033..177567 + 844 170683049 mrcB EcSMS35_0160 - penicillin-binding protein 1B 161 38.52 -2 177632..177766 - 44 170679586 - EcSMS35_0161 - hypothetical protein 162 51.04 0 177787..180045 + 752 170681393 fhuA EcSMS35_0162 - ferrichrome-iron receptor FhuA 163 56.64 +1 180096..180893 + 265 170682356 fhuC EcSMS35_0163 - ferrichrome transport ATP-binding protein FhuC 164 54.43 0 180893..181783 + 296 170684223 fhuD EcSMS35_0164 - ferrichrome-binding periplasmic protein FhuD 165 59.51 +1 181780..183762 + 660 170683245 fhuB EcSMS35_0165 - ferrichrome ABC transporter, permease protein FhuB 166 55.43 0 183797..185077 - 426 170680366 hemL EcSMS35_0166 - glutamate-1-semialdehyde-2,1-aminomutase 167 53.38 0 185302..186723 + 473 170682657 clcA EcSMS35_0167 - H(+)/Cl(-) exchange transporter ClcA 168 50.43 0 186805..187149 + 114 170682180 yadR EcSMS35_0168 - iron-sulfur cluster assembly accessory protein YadR 169 53.37 0 187196..187819 - 207 170681649 - EcSMS35_0169 - hypothetical protein 170 52.81 0 187857..188657 - 266 170681038 btuF EcSMS35_0170 - cobalamin ABC transporter, periplasmic cobalamin-binding protein 171 53.22 0 188650..189348 - 232 170681375 mtnN EcSMS35_0171 - MTA/SAH nucleosidase 172 47.56 0 189432..190949 + 505 170681908 dgt EcSMS35_0172 - deoxyguanosinetriphosphate triphosphohydrolase 173 53.96 0 191079..192503 + 474 170680398 degP EcSMS35_0173 - protease Do 174 53.11 0 192658..193815 + 385 170679721 cdaR EcSMS35_0174 - carbohydrate diacid regulator 175 44.70 -1 193869..194255 - 128 170683939 - EcSMS35_0175 - hypothetical protein 176 52.73 0 194570..195394 - 274 170682872 dapD EcSMS35_0176 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 177 53.76 0 195425..198097 - 890 170683624 glnD EcSMS35_0177 - protein-P-II uridylyltransferase 178 50.57 0 198159..198953 - 264 170684311 map EcSMS35_0178 - methionine aminopeptidase, type I 179 51.24 0 199321..200046 + 241 170679652 rpsB EcSMS35_0180 - ribosomal protein S2 180 50.91 0 199998..200162 - 54 170681918 - EcSMS35_0179 - hypothetical protein 181 49.65 0 200181..201032 + 283 170681184 tsf EcSMS35_0181 - translation elongation factor Ts 182 53.31 0 201179..201904 + 241 170681680 pyrH EcSMS35_0182 - UMP kinase 183 50.90 0 202054..202611 + 185 170683322 frr EcSMS35_0183 - ribosome releasing factor 184 52.63 0 202703..203899 + 398 170683853 dxr EcSMS35_0184 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 185 49.61 0 204085..204846 + 253 170681254 uppS EcSMS35_0185 - di-trans,poly-cis-decaprenylcistransferase 186 50.47 0 204859..205716 + 285 170682588 cdsA1 EcSMS35_0186 - phosphatidate cytidylyltransferase 187 50.78 0 205728..207080 + 450 170683080 rseP EcSMS35_0187 - RIP metalloprotease RseP 188 50.23 0 207110..209542 + 810 170683955 yaeT EcSMS35_0188 - outer membrane protein assembly complex, YaeT protein 189 48.97 0 209664..210149 + 161 170683286 skp EcSMS35_0189 - chaperone protein Skp 190 52.53 0 210153..211178 + 341 170683962 lpxD EcSMS35_0190 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 191 50.66 0 211283..211738 + 151 170680401 fabZ EcSMS35_0191 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 192 53.36 0 211742..212530 + 262 170679946 lpxA EcSMS35_0192 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 193 54.22 0 212530..213678 + 382 170681777 lpxB EcSMS35_0193 - lipid-A-disaccharide synthase 194 55.44 0 213675..214271 + 198 170680885 rnhB EcSMS35_0194 - ribonuclease HII 195 55.07 0 214308..217790 + 1160 170682325 dnaE EcSMS35_0195 - DNA polymerase III, alpha subunit 196 52.60 0 217803..218762 + 319 170682858 accA EcSMS35_0196 - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 197 51.26 0 218861..221002 + 713 170683659 ldcC1 EcSMS35_0197 - lysine decarboxylase, constitutive 198 51.03 0 221059..221448 + 129 170684191 - EcSMS35_0198 - glyoxylase family protein 199 58.04 +1 221513..222811 + 432 170682716 tilS EcSMS35_0199 - tRNA(Ile)-lysidine synthase 200 49.02 0 222860..223114 - 84 170682964 rof EcSMS35_0200 - Rof protein 201 50.75 0 223107..223307 - 66 170681531 - EcSMS35_0201 - hypothetical protein 202 53.11 0 223473..224018 + 181 170682076 - EcSMS35_0202 - hypothetical protein 203 56.26 +1 224015..224437 + 140 170680631 - EcSMS35_0203 - peptidyl-tRNA hydrolase domain-containing protein 204 52.74 0 224451..225161 + 236 170680878 cutF EcSMS35_0204 - copper homeostasis protein CutF 205 47.52 0 225317..226141 - 274 170683602 - EcSMS35_0205 - putative lipoprotein 206 54.16 0 226194..227912 - 572 170680577 proS EcSMS35_0206 - prolyl-tRNA synthetase 207 54.38 0 228023..228730 - 235 170683947 - EcSMS35_0207 - hypothetical protein 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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