version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1490 53.45 0 1538201..1538722 + 173 170682074 sodC_1 EcSMS35_1552 - superoxide dismutase (Cu-Zn) 1491 52.81 0 1538723..1540735 - 670 170682942 - EcSMS35_1553 - fusaric acid resistance domain-containing protein 1492 50.47 0 1540735..1541592 - 285 170681193 - EcSMS35_1554 - MFP family transporter 1493 49.37 0 1541595..1541831 - 78 170681662 - EcSMS35_1555 - hypothetical protein 1494 35.00 -2 1541888..1542007 + 39 170680115 - EcSMS35_1556 - hypothetical protein 1495 47.59 0 1542032..1542466 + 144 170683212 - EcSMS35_1557 - transcriptional regulator SlyA 1496 51.92 0 1542513..1542980 - 155 170681418 slyB EcSMS35_1558 - outer membrane lipoprotein SlyB 1497 54.77 0 1543254..1544363 + 369 170680769 anmK EcSMS35_1559 - anhydro-N-acetylmuramic acid kinase 1498 45.76 0 1544461..1544790 + 109 170680469 - EcSMS35_1560 - putative lipoprotein 1499 52.21 0 1544849..1545505 + 218 170679963 pdxH EcSMS35_1561 - pyridoxamine 5'-phosphate oxidase 1500 51.53 0 1545634..1546908 + 424 170683918 tyrS EcSMS35_1562 - tyrosyl-tRNA synthetase 1501 52.73 0 1546970..1547830 + 286 170683400 pdxY EcSMS35_1563 - pyridoxal kinase 1502 50.17 0 1547874..1548479 - 201 170682568 gst EcSMS35_1564 - glutathione S-transferase 1503 51.63 0 1548584..1550086 - 500 170682111 tppB EcSMS35_1565 - tripeptide permease TppB 1504 48.74 0 1550696..1551331 - 211 170681381 nth EcSMS35_1566 - endonuclease III 1505 53.16 0 1551331..1552026 - 231 170680858 rnfE EcSMS35_1567 - electron transport complex, RnfABCDGE type, E subunit 1506 52.98 0 1552030..1552650 - 206 170682231 rnfG EcSMS35_1568 - electron transport complex, RnfABCDGE type, G subunit 1507 52.97 0 1552654..1553712 - 352 170682943 rnfD EcSMS35_1569 - electron transport complex, RnfABCDGE type, D subunit 1508 55.05 0 1553713..1555743 - 676 170682353 rnfC EcSMS35_1570 - electron transport complex, RnfABCDGE type, C subunit 1509 54.40 0 1555736..1556314 - 192 170682878 rnfB EcSMS35_1571 - electron transport complex, RnfABCDGE type, B subunit 1510 51.72 0 1556314..1556895 - 193 170680993 rnfA EcSMS35_1572 - electron transport complex, RnfABCDGE type, A subunit 1511 48.53 0 1556972..1557412 - 146 170681496 - EcSMS35_1573 - hypothetical protein 1512 47.22 0 1557498..1557713 - 71 170679680 - EcSMS35_1574 - haemolysin expression modulating protein 1513 53.51 0 1558354..1559394 + 346 170680179 - EcSMS35_1575 - oxidoreductase, NAD-binding 1514 53.99 0 1559430..1560431 - 333 170684142 add EcSMS35_1576 - adenosine deaminase 1515 51.66 0 1560535..1561707 - 390 170682436 malY EcSMS35_1577 - maltose regulon modulator MalY 1516 52.35 0 1561717..1563309 - 530 170681681 malX EcSMS35_1578 - PTS system, maltose and glucose-specific IIBC component 1517 54.62 0 1563484..1564512 + 342 170681507 malI EcSMS35_1579 - maltose regulon regulatory protein MalI 1518 46.74 0 1564624..1565391 + 255 170680639 - EcSMS35_1580 - short chain dehydrogenase/reductase family oxidoreductase 1519 50.95 0 1565631..1566209 + 192 170679903 uidR EcSMS35_1581 - transcriptional regulator UidR 1520 51.99 0 1566599..1568410 + 603 170683754 uidA EcSMS35_1582 - beta-glucuronidase UidA 1521 51.89 0 1568407..1569780 + 457 170683190 uidB EcSMS35_1583 - glucuronide permease uidB 1522 47.52 0 1569837..1571084 + 415 170682689 uidC EcSMS35_1584 - membrane-associated protein UidC 1523 49.37 0 1571129..1572637 - 502 170682142 - EcSMS35_1585 - hypothetical protein 1524 51.02 0 1572738..1573913 - 391 170682319 manA EcSMS35_1586 - mannose-6-phosphate isomerase, class I 1525 50.88 0 1574112..1575758 + 548 170682150 fumA EcSMS35_1587 - fumarate hydratase 1526 53.56 0 1575901..1577304 + 467 170681319 fumC EcSMS35_1589 - fumarate hydratase 1527 50.00 0 1577301..1578242 - 313 170680500 tus EcSMS35_1588 - DNA replication terminus site-binding protein 1528 50.61 0 1578306..1579607 - 433 170682743 rstB EcSMS35_1590 - sensor histidine kinase RstB 1529 49.72 0 1579611..1580330 - 239 170683236 rstA EcSMS35_1591 - transcriptional regulatory protein RstA 1530 47.62 0 1580459..1580794 + 111 170680025 - EcSMS35_1593 - hypothetical protein 1531 50.21 0 1580791..1581513 - 240 170683762 - EcSMS35_1592 - short chain dehydrogenase/reductase family oxidoreductase 1532 53.36 0 1581550..1582932 - 460 170680556 arcD EcSMS35_1594 - arginine/ornithine antiporter 1533 51.11 0 1583118..1584062 - 314 170681099 ydgH EcSMS35_1595 - YdgH protein 1534 52.51 0 1584587..1586119 + 510 170682207 pntA EcSMS35_1596 - NAD(P) transhydrogenase, alpha subunit 1535 52.12 0 1586130..1587518 + 462 170682723 - EcSMS35_1597 - NAD(P) transhydrogenase, beta subunit 1536 49.76 0 1587543..1588577 - 344 170683134 - EcSMS35_1598 - PerM family permease 1537 42.90 -1 1588989..1589354 + 121 170683606 mdtJ EcSMS35_1599 - multidrug resistance protein MdtJ 1538 51.82 0 1589341..1589670 + 109 170682978 mdtI EcSMS35_1600 - multidrug resistance protein MdtI 1539 52.07 0 1589709..1590530 - 273 170684042 - EcSMS35_1601 - S1A family peptidase 1540 52.38 0 1590806..1591078 - 90 170681639 - EcSMS35_1602 - acid shock repeat-containing protein 1541 44.83 -1 1591190..1592398 + 402 170681161 - EcSMS35_1603 - IS10 transposase 1542 53.35 0 1592877..1594130 - 417 170680108 ynfM EcSMS35_1604 - major facilitator family transporter 1543 52.24 0 1594237..1595130 + 297 170680231 - EcSMS35_1605 - LysR family transcriptional regulator 1544 52.74 0 1595265..1596485 + 406 170679760 mic EcSMS35_1606 - transcriptional regulator Mic 1545 52.01 0 1596610..1597305 + 231 170684001 bioD2 EcSMS35_1608 - dethiobiotin synthase 1546 53.94 0 1597258..1598514 - 418 170682758 - EcSMS35_1607 - chloride channel (ClC) family protein 1547 53.33 0 1598709..1599323 - 204 170680290 dmsD EcSMS35_1609 - twin-arginine leader-binding protein DmsD 1548 52.16 0 1599366..1600220 - 284 170680653 dmsC2 EcSMS35_1610 - anaerobic dimethyl sulfoxide reductase, C subunit 1549 52.27 0 1600222..1600839 - 205 170679927 dmsB_1 EcSMS35_1611 - dimethylsulfoxide reductase, B subunit 1550 50.06 0 1603333..1605759 - 808 170682222 ynfE EcSMS35_1613 - anaerobic dimethyl sulfoxide reductase, A subunit YnfE 1551 56.54 +1 1605958..1606263 - 101 170681546 - EcSMS35_1614 - hypothetical protein 1552 43.78 -1 1606335..1607081 + 248 170680891 - EcSMS35_1615 - hypothetical protein 1553 47.06 0 1607084..1607644 - 186 170682991 speG EcSMS35_1616 - diamine N-acetyltransferase 1554 50.58 0 1607679..1608020 - 113 170680551 - EcSMS35_1617 - hypothetical protein 1555 51.99 0 1608155..1608481 + 108 170683618 - EcSMS35_1618 - hypothetical protein 1556 51.11 0 1608687..1609901 + 404 170684261 rspA EcSMS35_1619 - starvation-sensing protein RspA 1557 45.39 0 1609913..1610932 + 339 170681959 rspB EcSMS35_1620 - starvation sensing protein RspB 1558 46.64 0 1610990..1612357 + 455 170680764 ydfJ EcSMS35_1621 - inner membrane metabolite transport protein ydfJ 1559 37.61 -2 1612320..1612436 + 38 170681422 - EcSMS35_1622 - hypothetical protein 1560 49.83 0 1612446..1613906 + 486 170679858 - EcSMS35_1623 - mannitol dehydrogenase family protein 1561 51.47 0 1613942..1614145 - 67 170679938 - EcSMS35_1624 - hypothetical protein 1562 50.36 0 1614322..1615008 - 228 170679935 - EcSMS35_1625 - GntR family transcriptional regulator 1563 51.00 0 1615097..1615843 - 248 170680775 - EcSMS35_1626 - NADP-dependent l-serine/l-allo-threonine dehydrogenase ydfg 1564 50.34 0 1615980..1618025 + 681 170681397 dcp EcSMS35_1627 - peptidyl-dipeptidase Dcp 1565 46.56 0 1618388..1618780 + 130 170681831 - EcSMS35_1628 - hypothetical protein 1566 44.33 -1 1619035..1619925 + 296 170681992 - EcSMS35_1629 - diguanylate cyclase 1567 50.00 0 1620366..1621553 - 395 170682596 ydeE EcSMS35_1630 - major facilitator family transporter 1568 50.33 0 1621748..1622647 + 299 170682899 eamA EcSMS35_1631 - drug/metabolite exporter family transporter 1569 41.34 -1 1622692..1623390 - 232 170681310 - EcSMS35_1632 - GntR family transcriptional regulator 1570 41.35 -1 1623589..1623900 + 103 170679787 - EcSMS35_1633 - PTS system lactose/cellobiose family IIB subunit 1571 43.84 -1 1624014..1625336 + 440 170680463 - EcSMS35_1634 - PTS system lactose/cellobiose family IIC subunit 1572 45.51 0 1625364..1625675 + 103 170683356 - EcSMS35_1635 - PTS system lactose/cellobiose-specific family IIA subunit 1573 42.00 -1 1625731..1627404 + 557 170680584 bglH EcSMS35_1636 - glucoside specific outer membrane porin BglH 1574 45.21 0 1627429..1628868 + 479 170683087 - EcSMS35_1637 - putative 6-phospho-beta-glucosidase BglA 1575 49.32 0 1628925..1629143 - 72 170682435 marB EcSMS35_1638 - multiple antibiotic resistance protein MarB 1576 45.57 0 1629175..1629558 - 127 170684233 marA EcSMS35_1639 - multiple antibiotic resistance protein MarA 1577 49.66 0 1629579..1630013 - 144 170683414 marR EcSMS35_1640 - multiple antibiotic resistance protein MarR 1578 50.00 0 1630225..1630890 + 221 170680289 marC EcSMS35_1641 - multiple antibiotic resistance protein MarC 1579 51.55 0 1630915..1632105 - 396 170680058 sotB EcSMS35_1642 - sugar efflux transporter SotB 1580 49.59 0 1632023..1632145 + 40 170681467 - EcSMS35_1643 - hypothetical protein 1581 50.83 0 1632182..1632301 + 39 170681472 - EcSMS35_1645 - hypothetical protein 1582 39.70 -1 1632255..1633370 - 371 170680980 - EcSMS35_1644 - hypothetical protein 1583 54.20 0 1633448..1634329 - 293 170682090 - EcSMS35_1646 - LysR family transcriptional regulator 1584 53.06 0 1634430..1635818 + 462 170684086 - EcSMS35_1647 - aldehyde dehydrogenase (NAD) family protein 1585 51.56 0 1635882..1636808 + 308 170683424 glsA2 EcSMS35_1648 - glutaminase 1586 50.28 0 1636808..1637167 + 119 170684186 - EcSMS35_1649 - hypothetical protein 1587 48.56 0 1637306..1638724 + 472 170683666 - EcSMS35_1650 - diguanylate cyclase 1588 51.79 0 1638952..1640403 + 483 170679585 uxaB EcSMS35_1651 - tagaturonate reductase 1589 48.31 0 1640600..1641514 + 304 170681385 - EcSMS35_1652 - hypothetical protein 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0