version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1415 50.00 0 1458889..1459086 + 65 170683894 rpmI EcSMS35_1474 - ribosomal protein L35 1416 48.46 0 1459140..1459496 + 118 170681717 rplT EcSMS35_1475 - ribosomal protein L20 1417 54.17 0 1459802..1460785 + 327 170681078 pheS EcSMS35_1476 - phenylalanyl-tRNA synthetase, alpha subunit 1418 53.98 0 1460800..1463187 + 795 170681705 pheT EcSMS35_1477 - phenylalanyl-tRNA synthetase, beta-subunit 1419 50.00 0 1463192..1463491 + 99 170681870 ihfA EcSMS35_1478 - integration host factor, alpha subunit 1420 55.35 0 1463592..1464572 + 326 170683589 btuC EcSMS35_1479 - vitamin B12 import system permease protein btuC 1421 49.09 0 1464635..1465186 + 183 170683050 btuE EcSMS35_1480 - vitamin B12 transport periplasmic protein btuE 1422 54.93 0 1465186..1465935 + 249 170680385 btuD EcSMS35_1481 - vitamin B12 import ATP-binding protein BtuD 1423 50.11 0 1466013..1466477 + 154 170679750 - EcSMS35_1482 - NlpC/P60 family lipoprotein 1424 42.44 -1 1466724..1467437 + 237 170681488 - EcSMS35_1483 - hypothetical protein 1425 52.54 0 1467500..1468936 + 478 170680793 - EcSMS35_1484 - hypothetical protein 1426 45.21 0 1468940..1469158 - 72 170681679 - EcSMS35_1485 - hypothetical protein 1427 53.01 0 1469263..1470309 - 348 170681321 aroH EcSMS35_1486 - 3-deoxy-7-phosphoheptulonate synthase, Trp-sensitive 1428 51.44 0 1470466..1471299 - 277 170682773 - EcSMS35_1487 - hypothetical protein 1429 33.33 -2 1471410..1471577 + 55 170683464 - EcSMS35_1488 - hypothetical protein 1430 54.77 0 1471631..1474009 + 792 170682331 ppsA EcSMS35_1489 - phosphoenolpyruvate synthase 1431 51.96 0 1474498..1475898 + 466 170683002 - EcSMS35_1490 - divalent anion:Na+ symporter (DASS) family protein 1432 49.90 0 1475934..1476893 + 319 170681465 - EcSMS35_1491 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 1433 39.79 -1 1476904..1477383 + 159 170682152 - EcSMS35_1492 - hypothetical protein 1434 46.37 0 1477396..1478139 + 247 170679670 - EcSMS35_1493 - short chain dehydrogenase/reductase family oxidoreductase 1435 49.73 0 1478190..1479830 - 546 170680187 fadK EcSMS35_1494 - short-chain-fatty-acid--CoA ligase 1436 48.30 0 1479887..1480180 - 97 170683668 - EcSMS35_1495 - iron-sulfur cluster-binding protein 1437 54.26 0 1480177..1481466 - 429 170684211 - EcSMS35_1496 - protein FixC-like protein 1438 53.46 0 1481521..1482459 - 312 170682887 - EcSMS35_1497 - protein FixB-like protein 1439 51.11 0 1482479..1483243 - 254 170682544 - EcSMS35_1498 - protein FixA-like protein 1440 40.68 -1 1483280..1483456 + 58 170683001 - EcSMS35_1499 - hypothetical protein 1441 42.87 -1 1483559..1484470 + 303 170682471 - EcSMS35_1500 - AraC family transcriptional regulator 1442 51.43 0 1484513..1485667 - 384 170684026 - EcSMS35_1501 - acyl-CoA dehydrogenase 1443 47.49 0 1485678..1487273 - 531 170680395 pct EcSMS35_1502 - propionate CoA-transferase 1444 50.07 0 1487419..1488177 - 252 170680493 aroD EcSMS35_1503 - 3-dehydroquinate dehydratase, type I 1445 47.87 0 1488208..1489074 - 288 170679975 - EcSMS35_1504 - putative shikimate 5-dehydrogenase 1446 45.26 0 1489086..1490351 - 421 170681814 - EcSMS35_1505 - major facilitator transporter 1447 45.68 0 1490578..1491792 - 404 170681306 ydiM EcSMS35_1506 - major facilitator family transporter 1448 45.66 0 1491892..1492248 - 118 170680760 - EcSMS35_1507 - hypothetical protein 1449 54.09 0 1492677..1493789 - 370 170680839 ydiK EcSMS35_1508 - inner membrane protein YdiK 1450 53.55 0 1494178..1497234 + 1018 170681522 - EcSMS35_1509 - oxidoreductase, FAD-binding 1451 51.82 0 1497231..1497641 + 136 170682148 ydiL EcSMS35_1510 - esterase YdiI 1452 44.44 -1 1497741..1497929 + 62 170682283 - EcSMS35_1511 - hypothetical protein 1453 53.93 0 1498478..1498846 + 122 170682960 sufA EcSMS35_1512 - FeS assembly scaffold SufA 1454 51.61 0 1498855..1500342 + 495 170683248 sufB EcSMS35_1513 - FeS assembly protein SufB 1455 50.33 0 1500352..1501098 + 248 170683761 sufC EcSMS35_1514 - FeS assembly ATPase SufC 1456 53.22 0 1501073..1502344 + 423 170680131 sufD EcSMS35_1515 - FeS assembly protein SufD 1457 55.28 0 1502341..1503561 + 406 170680646 sufS EcSMS35_1516 - cysteine desulfurase 1458 49.64 0 1503574..1503990 + 138 170680508 sufE EcSMS35_1517 - cysteine desulfuration protein SufE 1459 52.94 0 1504139..1505143 + 334 170682137 - EcSMS35_1518 - LysM/ErfK/YbiS/YcfS/YnhG family protein 1460 50.63 0 1505207..1505443 - 78 170682645 lpp EcSMS35_1519 - major outer membrane lipoprotein 1461 50.04 0 1505754..1507166 - 470 170683460 pykF EcSMS35_1520 - pyruvate kinase I 1462 47.37 0 1507762..1507932 + 56 170683892 - EcSMS35_1521 - hypothetical protein 1463 37.68 -2 1508223..1508360 - 45 170679944 - EcSMS35_1522 - hypothetical protein 1464 47.85 0 1508388..1509014 + 208 170680484 - EcSMS35_1523 - iron-sulfur cluster-binding protein 1465 48.03 0 1509035..1511137 + 700 170681360 - EcSMS35_1524 - aldehyde ferredoxin oxidoreductase 1466 52.58 0 1511150..1511788 + 212 170681892 - EcSMS35_1525 - hypothetical protein 1467 49.72 0 1511801..1512520 + 239 170682806 - EcSMS35_1526 - iron-sulfur cluster-binding protein 1468 49.62 0 1512517..1513302 + 261 170680766 - EcSMS35_1527 - nickel-dependent hydrogenase, b-type cytochrome subunit 1469 52.28 0 1513306..1514118 + 270 170680009 - EcSMS35_1528 - hypothetical protein 1470 44.77 -1 1515853..1516158 - 101 170680041 ydhR EcSMS35_1530 - YdhR protein 1471 51.31 0 1516732..1517988 + 418 170682120 - EcSMS35_1533 - hypothetical protein 1472 53.28 0 1518029..1519402 - 457 170682804 - EcSMS35_1534 - multidrug resistance protein MdtK 1473 47.51 0 1519617..1520258 + 213 170683708 ribE EcSMS35_1535 - riboflavin synthase, alpha subunit 1474 48.22 0 1520298..1521446 - 382 170682135 cfa EcSMS35_1536 - cyclopropane-fatty-acyl-phospholipid synthase 1475 53.05 0 1521737..1522948 - 403 170680618 - EcSMS35_1537 - Bcr/CflA subfamily drug resistance transporter 1476 53.59 0 1523061..1523993 + 310 170682980 - EcSMS35_1539 - LysR family transcriptional regulator 1477 53.31 0 1523990..1525015 - 341 170683174 purR EcSMS35_1538 - transcriptional repressor PurR 1478 45.83 0 1525284..1525403 + 39 170682303 - EcSMS35_1540 - hypothetical protein 1479 53.42 0 1525569..1526738 + 389 170684306 - EcSMS35_1541 - major facilitator transporter 1480 49.66 0 1526884..1527465 - 193 170683613 sodB EcSMS35_1542 - superoxide dismutase (Fe) 1481 47.83 0 1527593..1528420 - 275 170683187 - EcSMS35_1543 - NlpC/P60 family protein 1482 52.30 0 1528755..1529102 + 115 170680379 - EcSMS35_1544 - putative monothiol glutaredoxin 1483 56.66 +1 1529153..1533769 - 1538 170679759 lhr EcSMS35_1545 - DEAD/DEAH box helicase family protein Lhr 1484 54.78 0 1533862..1534509 - 215 170681755 rnt EcSMS35_1546 - ribonuclease T 1485 51.47 0 1534612..1535019 - 135 170680256 gloA EcSMS35_1547 - lactoylglutathione lyase 1486 53.73 0 1535100..1536197 - 365 170683580 nemA EcSMS35_1548 - N-ethylmaleimide reductase 1487 52.67 0 1536234..1536833 - 199 170683234 - EcSMS35_1549 - TetR family transcriptional regulator 1488 48.94 0 1536798..1537175 + 125 170683126 - EcSMS35_1550 - hypothetical protein 1489 53.29 0 1537224..1538120 + 298 170683938 ydhF EcSMS35_1551 - oxidoreductase YdhF 1490 53.45 0 1538201..1538722 + 173 170682074 sodC_1 EcSMS35_1552 - superoxide dismutase (Cu-Zn) 1491 52.81 0 1538723..1540735 - 670 170682942 - EcSMS35_1553 - fusaric acid resistance domain-containing protein 1492 50.47 0 1540735..1541592 - 285 170681193 - EcSMS35_1554 - MFP family transporter 1493 49.37 0 1541595..1541831 - 78 170681662 - EcSMS35_1555 - hypothetical protein 1494 35.00 -2 1541888..1542007 + 39 170680115 - EcSMS35_1556 - hypothetical protein 1495 47.59 0 1542032..1542466 + 144 170683212 - EcSMS35_1557 - transcriptional regulator SlyA 1496 51.92 0 1542513..1542980 - 155 170681418 slyB EcSMS35_1558 - outer membrane lipoprotein SlyB 1497 54.77 0 1543254..1544363 + 369 170680769 anmK EcSMS35_1559 - anhydro-N-acetylmuramic acid kinase 1498 45.76 0 1544461..1544790 + 109 170680469 - EcSMS35_1560 - putative lipoprotein 1499 52.21 0 1544849..1545505 + 218 170679963 pdxH EcSMS35_1561 - pyridoxamine 5'-phosphate oxidase 1500 51.53 0 1545634..1546908 + 424 170683918 tyrS EcSMS35_1562 - tyrosyl-tRNA synthetase 1501 52.73 0 1546970..1547830 + 286 170683400 pdxY EcSMS35_1563 - pyridoxal kinase 1502 50.17 0 1547874..1548479 - 201 170682568 gst EcSMS35_1564 - glutathione S-transferase 1503 51.63 0 1548584..1550086 - 500 170682111 tppB EcSMS35_1565 - tripeptide permease TppB 1504 48.74 0 1550696..1551331 - 211 170681381 nth EcSMS35_1566 - endonuclease III 1505 53.16 0 1551331..1552026 - 231 170680858 rnfE EcSMS35_1567 - electron transport complex, RnfABCDGE type, E subunit 1506 52.98 0 1552030..1552650 - 206 170682231 rnfG EcSMS35_1568 - electron transport complex, RnfABCDGE type, G subunit 1507 52.97 0 1552654..1553712 - 352 170682943 rnfD EcSMS35_1569 - electron transport complex, RnfABCDGE type, D subunit 1508 55.05 0 1553713..1555743 - 676 170682353 rnfC EcSMS35_1570 - electron transport complex, RnfABCDGE type, C subunit 1509 54.40 0 1555736..1556314 - 192 170682878 rnfB EcSMS35_1571 - electron transport complex, RnfABCDGE type, B subunit 1510 51.72 0 1556314..1556895 - 193 170680993 rnfA EcSMS35_1572 - electron transport complex, RnfABCDGE type, A subunit 1511 48.53 0 1556972..1557412 - 146 170681496 - EcSMS35_1573 - hypothetical protein 1512 47.22 0 1557498..1557713 - 71 170679680 - EcSMS35_1574 - haemolysin expression modulating protein 1513 53.51 0 1558354..1559394 + 346 170680179 - EcSMS35_1575 - oxidoreductase, NAD-binding 1514 53.99 0 1559430..1560431 - 333 170684142 add EcSMS35_1576 - adenosine deaminase 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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