version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1362 42.82 -1 1405459..1406217 + 252 170680519 - EcSMS35_1421 - DeoR family transcriptional regulator 1363 45.40 0 1406334..1407692 + 452 170683543 ydjE EcSMS35_1422 - major facilitator family transporter 1364 52.49 0 1407785..1408426 - 213 170683713 pncA EcSMS35_1423 - pyrazinamidase/nicotinamidase 1365 50.44 0 1408437..1409453 - 338 170682503 ansA EcSMS35_1424 - L-asparaginase 1 1366 52.01 0 1409620..1411488 - 622 170683467 sppA EcSMS35_1425 - protease 4 1367 55.98 0 1411637..1412188 + 183 170682220 - EcSMS35_1426 - nitroreductase family protein 1368 55.08 0 1412305..1413348 + 347 170681972 selD EcSMS35_1427 - selenide, water dikinase 1369 54.50 0 1413353..1415308 + 651 170682846 topB EcSMS35_1428 - DNA topoisomerase III 1370 53.05 0 1415385..1416728 - 447 170681354 gdhA EcSMS35_1429 - NADP-specific glutamate dehydrogenase 1371 50.18 0 1416964..1417236 + 90 170683600 - EcSMS35_1431 - hypothetical protein 1372 55.64 0 1417202..1417609 - 135 170679665 nudG EcSMS35_1430 - CTP pyrophosphohydrolase 1373 54.27 0 1417696..1418316 + 206 170684299 - EcSMS35_1432 - CDP-alcohol phosphatidyltransferase family protein 1374 54.05 0 1418325..1419632 - 435 170684124 - EcSMS35_1433 - rhodanese-like domain-containing protein 1375 51.83 0 1419699..1420352 - 217 170682394 - EcSMS35_1434 - ABC transporter, ATP-binding protein 1376 56.45 +1 1420352..1421887 - 511 170682828 ynjC EcSMS35_1435 - ABC transporter, permease protein 1377 55.27 0 1421860..1423026 - 388 170681072 - EcSMS35_1436 - hypothetical protein 1378 56.65 +1 1423036..1423584 - 182 170682311 - EcSMS35_1437 - carboxymuconolactone decarboxylase family protein 1379 51.13 0 1423584..1424291 - 235 170682770 - EcSMS35_1438 - hypothetical protein 1380 48.23 0 1424306..1424983 - 225 170682069 - EcSMS35_1439 - hypothetical protein 1381 46.69 0 1424988..1425698 - 236 170683801 - EcSMS35_1440 - hypothetical protein 1382 53.66 0 1425865..1426671 - 268 170683141 xth EcSMS35_1441 - exodeoxyribonuclease III 1383 43.27 -1 1426684..1426854 - 56 170680684 - EcSMS35_1442 - hypothetical protein 1384 55.20 0 1427117..1428337 + 406 170680032 astC EcSMS35_1443 - succinylornithine transaminase 1385 55.56 0 1428334..1429368 + 344 170681730 astA EcSMS35_1444 - arginine N-succinyltransferase 1386 58.15 +1 1429365..1430843 + 492 170679694 astD EcSMS35_1445 - succinylglutamic semialdehyde dehydrogenase 1387 55.58 0 1430840..1432183 + 447 170681484 astB EcSMS35_1446 - succinylarginine dihydrolase 1388 53.25 0 1432176..1433144 + 322 170681014 astE EcSMS35_1447 - succinylglutamate desuccinylase 1389 51.03 0 1433474..1433959 + 161 170681002 spy EcSMS35_1448 - spheroplast protein Y 1390 51.22 0 1434162..1434737 + 191 170683402 - EcSMS35_1450 - hypothetical protein 1391 50.79 0 1434697..1435584 - 295 170683911 cho EcSMS35_1449 - excinuclease cho 1392 48.79 0 1435814..1436641 - 275 170680478 nadE EcSMS35_1451 - NAD+ synthetase 1393 49.26 0 1436843..1437181 + 112 170679970 osmE EcSMS35_1452 - osmotically-inducible lipoprotein E 1394 44.17 -1 1437441..1437800 + 119 170681788 chbB EcSMS35_1453 - PTS system, N,N'-diacetylchitobiose-specific IIB component 1395 49.01 0 1437885..1439243 + 452 170681270 chbC EcSMS35_1454 - PTS system, N,N'-diacetylchitobiose-specific IIC component 1396 49.29 0 1439294..1439644 + 116 170680857 chbA EcSMS35_1455 - PTS system, N,N'-diacetylchitobiose-specific EIIA component 1397 41.31 -1 1439655..1440494 + 279 170682696 chbR EcSMS35_1456 - transcriptional regulator ChbR 1398 46.49 0 1440598..1441950 + 450 170680403 chbF EcSMS35_1457 - 6-phospho-beta-glucosidase 1399 50.67 0 1441963..1442712 + 249 170682490 - EcSMS35_1458 - hypothetical protein 1400 51.64 0 1442759..1445020 - 753 170680521 katE EcSMS35_1459 - catalase HPII 1401 52.26 0 1445224..1445466 + 80 170681034 cedA EcSMS35_1460 - cell division activator CedA 1402 35.07 -2 1445755..1446558 + 267 170683283 - EcSMS35_1461 - hypothetical protein 1403 53.09 0 1446562..1447953 - 463 170683964 - EcSMS35_1462 - sodium/dicarboxylate symporter family protein 1404 51.10 0 1448086..1448676 - 196 170681980 - EcSMS35_1463 - putative metal-dependent hydrolase, membrane-bound 1405 51.42 0 1448839..1449507 - 222 170682627 - EcSMS35_1464 - HAD family hydrolase 1406 44.13 -1 1449654..1450190 + 178 170682258 - EcSMS35_1465 - hypothetical protein 1407 52.73 0 1450231..1451091 - 286 170682947 - EcSMS35_1466 - fructosamine kinase 1408 43.30 -1 1451197..1451487 - 96 170680915 - EcSMS35_1467 - hypothetical protein 1409 53.98 0 1451588..1452517 - 309 170680956 pfkB EcSMS35_1468 - 6-phosphofructokinase 1410 49.41 0 1452804..1453562 + 252 170680138 - EcSMS35_1469 - hypothetical protein 1411 47.95 0 1453615..1453833 - 72 170681839 - EcSMS35_1470 - hypothetical protein 1412 38.81 -2 1453897..1455795 - 632 170683130 - EcSMS35_1471 - ankyrin repeat-containing protein 1413 49.97 0 1456318..1458246 + 642 170680212 thrS EcSMS35_1472 - threonyl-tRNA synthetase 1414 47.82 0 1458358..1458792 + 144 170682199 infC EcSMS35_1473 - translation initiation factor IF-3 1415 50.00 0 1458889..1459086 + 65 170683894 rpmI EcSMS35_1474 - ribosomal protein L35 1416 48.46 0 1459140..1459496 + 118 170681717 rplT EcSMS35_1475 - ribosomal protein L20 1417 54.17 0 1459802..1460785 + 327 170681078 pheS EcSMS35_1476 - phenylalanyl-tRNA synthetase, alpha subunit 1418 53.98 0 1460800..1463187 + 795 170681705 pheT EcSMS35_1477 - phenylalanyl-tRNA synthetase, beta-subunit 1419 50.00 0 1463192..1463491 + 99 170681870 ihfA EcSMS35_1478 - integration host factor, alpha subunit 1420 55.35 0 1463592..1464572 + 326 170683589 btuC EcSMS35_1479 - vitamin B12 import system permease protein btuC 1421 49.09 0 1464635..1465186 + 183 170683050 btuE EcSMS35_1480 - vitamin B12 transport periplasmic protein btuE 1422 54.93 0 1465186..1465935 + 249 170680385 btuD EcSMS35_1481 - vitamin B12 import ATP-binding protein BtuD 1423 50.11 0 1466013..1466477 + 154 170679750 - EcSMS35_1482 - NlpC/P60 family lipoprotein 1424 42.44 -1 1466724..1467437 + 237 170681488 - EcSMS35_1483 - hypothetical protein 1425 52.54 0 1467500..1468936 + 478 170680793 - EcSMS35_1484 - hypothetical protein 1426 45.21 0 1468940..1469158 - 72 170681679 - EcSMS35_1485 - hypothetical protein 1427 53.01 0 1469263..1470309 - 348 170681321 aroH EcSMS35_1486 - 3-deoxy-7-phosphoheptulonate synthase, Trp-sensitive 1428 51.44 0 1470466..1471299 - 277 170682773 - EcSMS35_1487 - hypothetical protein 1429 33.33 -2 1471410..1471577 + 55 170683464 - EcSMS35_1488 - hypothetical protein 1430 54.77 0 1471631..1474009 + 792 170682331 ppsA EcSMS35_1489 - phosphoenolpyruvate synthase 1431 51.96 0 1474498..1475898 + 466 170683002 - EcSMS35_1490 - divalent anion:Na+ symporter (DASS) family protein 1432 49.90 0 1475934..1476893 + 319 170681465 - EcSMS35_1491 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 1433 39.79 -1 1476904..1477383 + 159 170682152 - EcSMS35_1492 - hypothetical protein 1434 46.37 0 1477396..1478139 + 247 170679670 - EcSMS35_1493 - short chain dehydrogenase/reductase family oxidoreductase 1435 49.73 0 1478190..1479830 - 546 170680187 fadK EcSMS35_1494 - short-chain-fatty-acid--CoA ligase 1436 48.30 0 1479887..1480180 - 97 170683668 - EcSMS35_1495 - iron-sulfur cluster-binding protein 1437 54.26 0 1480177..1481466 - 429 170684211 - EcSMS35_1496 - protein FixC-like protein 1438 53.46 0 1481521..1482459 - 312 170682887 - EcSMS35_1497 - protein FixB-like protein 1439 51.11 0 1482479..1483243 - 254 170682544 - EcSMS35_1498 - protein FixA-like protein 1440 40.68 -1 1483280..1483456 + 58 170683001 - EcSMS35_1499 - hypothetical protein 1441 42.87 -1 1483559..1484470 + 303 170682471 - EcSMS35_1500 - AraC family transcriptional regulator 1442 51.43 0 1484513..1485667 - 384 170684026 - EcSMS35_1501 - acyl-CoA dehydrogenase 1443 47.49 0 1485678..1487273 - 531 170680395 pct EcSMS35_1502 - propionate CoA-transferase 1444 50.07 0 1487419..1488177 - 252 170680493 aroD EcSMS35_1503 - 3-dehydroquinate dehydratase, type I 1445 47.87 0 1488208..1489074 - 288 170679975 - EcSMS35_1504 - putative shikimate 5-dehydrogenase 1446 45.26 0 1489086..1490351 - 421 170681814 - EcSMS35_1505 - major facilitator transporter 1447 45.68 0 1490578..1491792 - 404 170681306 ydiM EcSMS35_1506 - major facilitator family transporter 1448 45.66 0 1491892..1492248 - 118 170680760 - EcSMS35_1507 - hypothetical protein 1449 54.09 0 1492677..1493789 - 370 170680839 ydiK EcSMS35_1508 - inner membrane protein YdiK 1450 53.55 0 1494178..1497234 + 1018 170681522 - EcSMS35_1509 - oxidoreductase, FAD-binding 1451 51.82 0 1497231..1497641 + 136 170682148 ydiL EcSMS35_1510 - esterase YdiI 1452 44.44 -1 1497741..1497929 + 62 170682283 - EcSMS35_1511 - hypothetical protein 1453 53.93 0 1498478..1498846 + 122 170682960 sufA EcSMS35_1512 - FeS assembly scaffold SufA 1454 51.61 0 1498855..1500342 + 495 170683248 sufB EcSMS35_1513 - FeS assembly protein SufB 1455 50.33 0 1500352..1501098 + 248 170683761 sufC EcSMS35_1514 - FeS assembly ATPase SufC 1456 53.22 0 1501073..1502344 + 423 170680131 sufD EcSMS35_1515 - FeS assembly protein SufD 1457 55.28 0 1502341..1503561 + 406 170680646 sufS EcSMS35_1516 - cysteine desulfurase 1458 49.64 0 1503574..1503990 + 138 170680508 sufE EcSMS35_1517 - cysteine desulfuration protein SufE 1459 52.94 0 1504139..1505143 + 334 170682137 - EcSMS35_1518 - LysM/ErfK/YbiS/YcfS/YnhG family protein 1460 50.63 0 1505207..1505443 - 78 170682645 lpp EcSMS35_1519 - major outer membrane lipoprotein 1461 50.04 0 1505754..1507166 - 470 170683460 pykF EcSMS35_1520 - pyruvate kinase I 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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