version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1269 49.07 0 1316688..1317443 - 251 170682668 znuC EcSMS35_1328 - high-affinity zinc uptake ABC transporter, ATP-binding protein ZnuC 1270 47.40 0 1317396..1318454 + 352 170681737 znuA EcSMS35_1329 - zinc ABC transporter, periplasmic zinc-binding protein 1271 52.38 0 1318470..1319792 + 440 170682487 - EcSMS35_1330 - metalloprotease opacity-associated protein A family 1272 51.03 0 1319911..1320882 + 323 170680587 msbB EcSMS35_1331 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1273 52.60 0 1321014..1322456 - 480 170680822 pykA EcSMS35_1332 - pyruvate kinase II 1274 49.66 0 1322584..1323453 - 289 170683767 - EcSMS35_1333 - RpiR family transcriptional regulator 1275 34.67 -2 1323476..1323625 + 49 170679835 - EcSMS35_1334 - hypothetical protein 1276 51.15 0 1323791..1325266 + 491 170683501 zwf EcSMS35_1335 - glucose-6-phosphate 1-dehydrogenase 1277 53.48 0 1325501..1327312 + 603 170684043 edd EcSMS35_1336 - phosphogluconate dehydratase 1278 55.92 0 1327349..1327990 + 213 170682566 eda EcSMS35_1337 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 1279 54.37 0 1328046..1329224 - 392 170684011 purT EcSMS35_1338 - phosphoribosylglycinamide formyltransferase 2 1280 49.48 0 1329358..1329648 + 96 170679848 - EcSMS35_1339 - YebG protein 1281 50.14 0 1329703..1330071 + 122 170680374 - EcSMS35_1340 - putative lipoprotein 1282 53.03 0 1330388..1331047 + 219 170681801 - EcSMS35_1341 - hypothetical protein 1283 50.22 0 1331254..1333314 + 686 170682850 prtB EcSMS35_1343 - oligopeptidase B 1284 51.89 0 1333311..1333973 - 220 170681411 exoX EcSMS35_1342 - exodeoxyribonuclease X 1285 51.90 0 1333997..1334653 - 218 170683686 - EcSMS35_1344 - carbon-nitrogen family hydrolase 1286 48.05 0 1334755..1334985 - 76 170680257 holE EcSMS35_1345 - DNA polymerase III, theta subunit 1287 49.60 0 1335124..1335498 + 124 170680865 - EcSMS35_1346 - copper resistance protein CopC 1288 53.15 0 1335502..1336374 + 290 170682421 - EcSMS35_1347 - copper resistance protein D 1289 46.20 0 1336387..1336728 + 113 170679629 - EcSMS35_1348 - hypothetical protein 1290 47.95 0 1337124..1337780 + 218 170681542 pphA EcSMS35_1349 - serine/threonine-protein phosphatase 1 1291 44.79 -1 1337781..1337972 - 63 170680889 - EcSMS35_1350 - hypothetical protein 1292 49.37 0 1338077..1338313 - 78 170682835 - EcSMS35_1351 - hypothetical protein 1293 52.77 0 1338431..1339876 - 481 170683942 rsmF EcSMS35_1352 - ribosomal RNA small subunit methyltransferase F 1294 53.48 0 1339950..1342589 - 879 170684215 - EcSMS35_1353 - mce-related protein 1295 50.69 0 1342552..1343790 - 412 170683557 - EcSMS35_1354 - PqiA family integral membrane protein 1296 48.55 0 1343911..1344462 + 183 170681196 - EcSMS35_1355 - GAF domain-containing protein 1297 53.65 0 1344559..1345257 + 232 170682895 proQ EcSMS35_1356 - ProP effector 1298 50.17 0 1345283..1347325 + 680 170681936 prc EcSMS35_1357 - C-terminal processing peptidase 1299 52.38 0 1347517..1348398 + 293 170682375 - EcSMS35_1358 - M48B family peptidase 1300 51.67 0 1348444..1349817 - 457 170680826 - EcSMS35_1359 - major facilitator transporter 1301 50.00 0 1349994..1350785 + 263 170681338 kdgR EcSMS35_1360 - transcriptional regulator KdgR 1302 44.17 -1 1350929..1351168 - 79 170683696 - EcSMS35_1361 - hypothetical protein 1303 46.53 0 1351327..1351470 + 47 170679830 - EcSMS35_1362 - putative lipoprotein 1304 42.71 -1 1351545..1351832 + 95 170682701 - EcSMS35_1363 - hypothetical protein 1305 42.36 -1 1352502..1352645 + 47 170683542 - EcSMS35_1364 - hypothetical protein 1306 47.14 0 1352658..1352867 + 69 170682897 cspC EcSMS35_1365 - cold shock protein CspC 1307 51.48 0 1353033..1353842 + 269 170683757 rrmA EcSMS35_1367 - ribosomal RNA large subunit methyltransferase A 1308 51.32 0 1353839..1354405 - 188 170683257 - EcSMS35_1366 - hypothetical protein 1309 44.66 -1 1354834..1355292 - 152 170682842 - EcSMS35_1368 - hypothetical protein 1310 52.70 0 1355347..1356198 - 283 170680039 manZ EcSMS35_1369 - PTS system, mannose-specific IID component 1311 51.56 0 1356211..1357011 - 266 170683840 manY EcSMS35_1370 - PTS system, mannose-specific IIC component 1312 50.10 0 1357074..1358045 - 323 170680281 manX EcSMS35_1371 - PTS system, mannose-specific IIAB component 1313 53.95 0 1358508..1360064 + 518 170679631 - EcSMS35_1372 - TerC family/CBS/transporter associated domain-containing protein 1314 50.53 0 1360068..1361666 - 532 170681526 - EcSMS35_1373 - cyclic diguanylate phosphodiesterase domain-containing protein 1315 54.87 0 1361797..1363161 - 454 170681757 sdaA EcSMS35_1374 - L-serine ammonia-lyase 1 1316 54.92 0 1363345..1363923 - 192 170680320 - EcSMS35_1375 - NUDIX family hydrolase 1317 51.10 0 1363927..1365288 - 453 170679636 pabB EcSMS35_1376 - aminodeoxychorismate synthase 1318 54.44 0 1365362..1365541 + 59 170681374 - EcSMS35_1377 - hypothetical protein 1319 44.67 -1 1365661..1365960 - 99 170681162 - EcSMS35_1378 - hypothetical protein 1320 51.30 0 1366382..1366726 - 114 170680959 - EcSMS35_1379 - endoribonuclease L-PSP family protein 1321 55.78 0 1366858..1368768 + 636 170682824 - EcSMS35_1380 - hypothetical protein 1322 57.04 +1 1368826..1369521 + 231 170683819 - EcSMS35_1381 - glycoprotease family protein 1323 53.44 0 1369560..1370141 + 193 170683154 slp EcSMS35_1382 - outer membrane protein Slp 1324 51.13 0 1370346..1372031 + 561 170680693 fadD EcSMS35_1383 - long-chain-fatty-acid--CoA ligase 1325 53.81 0 1372101..1373228 + 375 170680016 rnd EcSMS35_1384 - ribonuclease D 1326 49.28 0 1373275..1374240 - 321 170680439 - EcSMS35_1385 - oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein 1327 51.82 0 1374296..1375420 - 374 170679804 - EcSMS35_1386 - Rieske (2Fe-2S) domain-containing protein 1328 50.90 0 1375452..1377062 - 536 170681413 - EcSMS35_1387 - BCCT family transporter 1329 53.50 0 1377313..1378398 - 361 170679663 ttuC EcSMS35_1388 - tartrate dehydrogenase/decarboxylase 1330 51.95 0 1378501..1379424 + 307 170681592 - EcSMS35_1389 - LysR family transcriptional regulator 1331 45.07 0 1379551..1380189 + 212 170680974 - EcSMS35_1390 - putative homoserine/threonine efflux protein 1332 37.78 -2 1380257..1380391 - 44 170682861 - EcSMS35_1391 - hypothetical protein 1333 48.33 0 1380362..1380721 + 119 170682328 - EcSMS35_1392 - hypothetical protein 1334 46.45 0 1380725..1380907 + 60 170684193 - EcSMS35_1393 - hypothetical protein 1335 45.83 0 1380924..1381043 + 39 170683640 - EcSMS35_1394 - hypothetical protein 1336 46.59 0 1381055..1381303 + 82 170684204 - EcSMS35_1395 - hypothetical protein 1337 40.35 -1 1381439..1381552 - 37 170683641 - EcSMS35_1396 - hypothetical protein 1338 48.73 0 1381570..1382595 - 341 170679654 - EcSMS35_1397 - GAF domain/diguanylate cyclase domain-containing protein 1339 51.37 0 1382778..1383032 + 84 170679933 - EcSMS35_1398 - putative lipoprotein 1340 52.01 0 1383054..1383401 - 115 170681477 - EcSMS35_1399 - hypothetical protein 1341 52.88 0 1383456..1384637 - 393 170683088 yeaN EcSMS35_1400 - inner membrane transport protein yeaN 1342 50.62 0 1384746..1385555 + 269 170684028 - EcSMS35_1402 - AraC family transcriptional regulator 1343 55.70 0 1385512..1385958 - 148 170682574 - EcSMS35_1401 - hypothetical protein 1344 45.10 0 1386080..1386232 + 50 170683511 - EcSMS35_1403 - hypothetical protein 1345 51.19 0 1386233..1386736 - 167 170684068 - EcSMS35_1404 - YbaK/prolyl-tRNA synthetase-associated domain-containing protein 1346 45.61 0 1386779..1388269 - 496 170683497 - EcSMS35_1405 - diguanylate cyclase 1347 39.18 -2 1388450..1389784 - 444 170680353 - EcSMS35_1406 - diguanylate cyclase 1348 49.38 0 1390072..1391355 - 427 170679771 - EcSMS35_1407 - hypothetical protein 1349 49.87 0 1391468..1393402 - 644 170684310 - EcSMS35_1408 - serine kinase family protein 1350 52.21 0 1393838..1394584 + 248 170682310 mipA EcSMS35_1409 - MltA-interacting protein MipA 1351 50.88 0 1394674..1395528 + 284 170683077 - EcSMS35_1410 - aldo/keto reductase family oxidoreductase 1352 49.83 0 1395579..1396463 - 294 170681442 - EcSMS35_1411 - aldose 1-epimerase family protein 1353 49.90 0 1396547..1397542 - 331 170679626 gapA EcSMS35_1412 - giyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 1354 49.03 0 1397884..1398297 + 137 170680440 msrB EcSMS35_1413 - methionine-R-sulfoxide reductase 1355 45.05 0 1398339..1398611 + 90 170683495 - EcSMS35_1414 - hypothetical protein 1356 49.86 0 1398981..1400057 + 358 170684023 - EcSMS35_1415 - zinc-binding dehydrogenase family oxidoreductase 1357 48.91 0 1400084..1401463 + 459 170683522 ydjK EcSMS35_1416 - major facilitator family transporter 1358 46.55 0 1401480..1402523 + 347 170684066 gutB EcSMS35_1417 - sorbitol dehydrogenase 1359 44.92 -1 1402544..1403380 + 278 170681361 - EcSMS35_1418 - fructose-bisphosphate aldolase 1360 45.04 0 1403385..1404332 + 315 170679811 - EcSMS35_1419 - PfkB family kinase 1361 48.11 0 1404342..1405322 + 326 170680323 - EcSMS35_1420 - aldo/keto reductase family oxidoreductase 1362 42.82 -1 1405459..1406217 + 252 170680519 - EcSMS35_1421 - DeoR family transcriptional regulator 1363 45.40 0 1406334..1407692 + 452 170683543 ydjE EcSMS35_1422 - major facilitator family transporter 1364 52.49 0 1407785..1408426 - 213 170683713 pncA EcSMS35_1423 - pyrazinamidase/nicotinamidase 1365 50.44 0 1408437..1409453 - 338 170682503 ansA EcSMS35_1424 - L-asparaginase 1 1366 52.01 0 1409620..1411488 - 622 170683467 sppA EcSMS35_1425 - protease 4 1367 55.98 0 1411637..1412188 + 183 170682220 - EcSMS35_1426 - nitroreductase family protein 1368 55.08 0 1412305..1413348 + 347 170681972 selD EcSMS35_1427 - selenide, water dikinase 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0