version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 943 54.24 0 1060995..1063103 + 702 170080606 rlmL ECDH10B_1018 - 23S rRNA m2G2445 methyltransferase 944 52.41 0 1063115..1065022 + 635 170080607 uup ECDH10B_1019 - ABC transporter ATP-binding protein 945 52.23 0 1065152..1066405 + 417 170080608 pqiA ECDH10B_1020 - paraquat-inducible membrane protein A 946 50.21 0 1066410..1068050 + 546 170080609 pqiB ECDH10B_1021 - paraquat-inducible protein B 947 52.13 0 1068047..1068610 + 187 170080610 ymbA ECDH10B_1022 - hypothetical protein 948 54.17 0 1068866..1069033 + 55 170080611 rmf ECDH10B_1023 - ribosome modulation factor 949 53.18 0 1069103..1069621 - 172 170080612 fabA ECDH10B_1024 - beta-hydroxydecanoyl thioester dehydrase 950 51.79 0 1069690..1071450 - 586 170080613 ycbZ ECDH10B_1025 - peptidase 951 46.14 -1 1071636..1072088 + 150 170080614 ycbG ECDH10B_1026 - hypothetical protein 952 53.79 0 1072164..1073204 - 346 170080615 ompA ECDH10B_1027 - outer membrane protein A (3a;II*;G;d) 953 48.24 0 1073561..1074070 - 169 170080616 sulA ECDH10B_1028 - SOS cell division inhibitor 954 48.10 0 1074289..1074918 + 209 170080617 sxy ECDH10B_1029 - CRP-S promoter co-activator 955 52.23 0 1074881..1077034 - 717 170080618 yccS ECDH10B_1030 - inner membrane protein 956 48.32 0 1077053..1077499 - 148 170080619 yccF ECDH10B_1031 - inner membrane protein 957 53.04 0 1077622..1079676 + 684 170080620 helD ECDH10B_1032 - DNA helicase IV 958 52.72 0 1079708..1080166 - 152 170080621 mgsA ECDH10B_1033 - methylglyoxal synthase 959 50.68 0 1080262..1080924 - 220 170080622 yccT ECDH10B_1034 - hypothetical protein 960 54.35 0 1081097..1081510 + 137 170080623 yccU ECDH10B_1035 - CoA-binding protein 961 55.66 0 1081555..1081872 - 105 170080624 hspQ ECDH10B_1036 - DNA-binding protein, hemimethylated 962 51.81 0 1081930..1083120 - 396 170080625 yccW ECDH10B_1037 - methyltransferase 963 52.33 0 1083215..1083493 + 92 170080626 yccX ECDH10B_1038 - acylphosphatase 964 46.67 0 1083490..1083819 - 109 170080627 yccK ECDH10B_1039 - sulfur transfer protein 965 51.21 0 1083910..1084569 - 219 170080628 yccA ECDH10B_1040 - inner membrane protein 966 56.12 +1 1085290..1086408 + 372 170080629 hyaA ECDH10B_1042 - hydrogenase 1, small subunit 967 56.52 +1 1086405..1088198 + 597 170080630 hyaB ECDH10B_1043 - hydrogenase 1, large subunit 968 51.84 0 1088217..1088924 + 235 170080631 hyaC ECDH10B_1044 - hydrogenase 1, b-type cytochrome subunit 969 58.84 +1 1088921..1089508 + 195 170080632 hyaD ECDH10B_1045 - hypothetical protein 970 56.64 +1 1089505..1089903 + 132 170080633 hyaE ECDH10B_1046 - HyaE 971 54.90 0 1089900..1090757 + 285 170080634 hyaF ECDH10B_1047 - HyaF 972 54.05 0 1090891..1092435 + 514 170080635 appC ECDH10B_1048 - cytochrome bd-II oxidase, subunit I 973 53.12 0 1092447..1093583 + 378 170080636 appB ECDH10B_1049 - cytochrome bd-II oxidase, subunit II 974 53.89 0 1093768..1095066 + 432 170080637 appA ECDH10B_1050 - phosphoanhydride phosphorylase 975 50.53 0 1095181..1097361 - 726 170080638 etk ECDH10B_1051 - cryptic autophosphorylating protein tyrosine kinase Etk 976 52.35 0 1097381..1097827 - 148 170080639 etp ECDH10B_1052 - phosphotyrosine-protein phosphatase 977 50.96 0 1097815..1098954 - 379 170080640 gfcE ECDH10B_1053 - exopolysaccharide export protein 978 51.98 0 1099000..1101096 - 698 170080641 gfcD ECDH10B_1054 - hypothetical protein 979 52.34 0 1101096..1101842 - 248 170080642 gfcC ECDH10B_1055 - hypothetical protein 980 47.60 0 1101839..1102483 - 214 170080643 gfcB ECDH10B_1056 - outer membrane lipoprotein 981 57.52 +1 1102590..1102895 - 101 170080644 gfcA ECDH10B_1057 - hypothetical protein 982 52.90 0 1102984..1103259 + 91 170080645 insA-4 ECDH10B_1058 - IS1 repressor protein InsA 983 54.76 0 1103178..1103681 + 167 170080646 insB-4 ECDH10B_1059 - IS1 transposase InsAB' 984 46.95 0 1104114..1104326 - 70 170080647 cspH ECDH10B_1060 - CspA family stress protein 985 44.13 -1 1104612..1104824 + 70 170080648 cspG ECDH10B_1061 - DNA-binding transcriptional regulator 986 41.56 -2 1104998..1105228 + 76 170080649 ymcE ECDH10B_1062 - cold shock gene 987 39.66 -2 1105218..1105391 + 57 170080650 gnsA ECDH10B_1063 - regulator of phosphatidylethanolamine synthesis 988 49.16 0 1105440..1106513 - 357 170080651 yccM ECDH10B_1064 - 4Fe-4S membrane protein 989 53.77 0 1106585..1109329 - 914 170080652 torS ECDH10B_1065 - hybrid sensory histidine kinase in two-component regulatory system with TorR 990 53.45 0 1109412..1110440 + 342 170080653 torT ECDH10B_1066 - periplasmic sensory protein associated with the TorRS two-component regulatory system 991 52.38 0 1110413..1111105 - 230 170080654 torR ECDH10B_1067 - DNA-binding response regulator in two-component regulatory system with TorS 992 51.24 0 1111235..1112407 + 390 170080655 torC ECDH10B_1068 - trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit 993 55.32 0 1112407..1114953 + 848 170080656 torA ECDH10B_1069 - trimethylamine N-oxide (TMAO) reductase I, catalytic subunit 994 53.17 0 1114950..1115549 + 199 170080657 torD ECDH10B_1070 - chaperone involved in maturation of TorA subunit of trimethylamine N-oxide reductase system I 995 54.25 0 1115701..1116006 - 101 170080658 cbpM ECDH10B_1071 - modulator of CbpA co-chaperone 996 52.88 0 1116006..1116926 - 306 170080659 cbpA ECDH10B_1072 - curved DNA-binding protein 997 34.13 -2 1117187..1118443 + 418 170080660 yccE ECDH10B_1073 - hypothetical protein 998 51.61 0 1118736..1119977 + 413 170080661 agp ECDH10B_1074 - glucose-1-phosphatase/inositol phosphatase 999 46.93 0 1120015..1120242 - 75 170080662 yccJ ECDH10B_1075 - hypothetical protein 1000 53.94 0 1120263..1120859 - 198 170080663 wrbA ECDH10B_1076 - flavoprotein in Trp regulation 1001 51.15 0 1121232..1121405 + 57 170080664 ymdF ECDH10B_1077 - hypothetical protein 1002 54.03 0 1121662..1122990 - 442 170080665 rutG ECDH10B_1078 - pyrimidine transporter 1003 58.99 +1 1123011..1123505 - 164 170080666 rutF ECDH10B_1079 - oxidoreductase, flavin:NADH component 1004 57.19 +1 1123516..1124106 - 196 170080667 rutE ECDH10B_1080 - oxidoreductase 1005 57.93 +1 1124116..1124916 - 266 170080668 rutD ECDH10B_1081 - hydrolase 1006 54.01 0 1124924..1125310 - 128 170080669 rutC ECDH10B_1082 - hypothetical protein 1007 55.41 0 1125322..1126014 - 230 170080670 rutB ECDH10B_1083 - isochorismatase 1008 55.09 0 1126014..1127162 - 382 170080671 rutA ECDH10B_1084 - monooxygenase 1009 51.33 0 1127393..1128031 + 212 170080672 rutR ECDH10B_1085 - rut operon repressor 1010 56.98 +1 1128071..1132033 - 1320 170080673 putA ECDH10B_1086 - multifunctional proline dehydrogenase, delta-1-pyrroline-5-carboxylate dehydrogenase, and DNA-binding transcriptional regulator 1011 53.68 0 1132456..1133964 + 502 170080674 putP ECDH10B_1087 - proline:sodium symporter 1012 51.33 0 1135394..1136521 + 375 170080675 efeO ECDH10B_1091 - component of a tripartite ferrous iron transporter 1013 53.77 0 1136527..1137798 + 423 170080676 efeB ECDH10B_1092 - redox component of a tripartite ferrous iron transporter 1014 52.21 0 1138143..1139207 + 354 170080677 phoH ECDH10B_1093 - hypothetical protein 1015 44.20 -1 1139257..1139670 - 137 170080678 pgaD ECDH10B_1094 - inner membrane protein 1016 46.68 0 1139672..1140997 - 441 170080679 pgaC ECDH10B_1095 - putative polysaccharide polymerase 1017 44.43 -1 1140990..1143008 - 672 170080680 pgaB ECDH10B_1096 - putatative polysaccharide N-deacetylase/carbohydrate esterase 1018 47.32 0 1143017..1145440 - 807 170080681 pgaA ECDH10B_1097 - putative outer membrane poly-beta-1,6-N-acetyl-D-glucosamine (PGA) translocation/docking protein 1019 55.13 0 1148762..1149628 - 288 170080682 insF-4 ECDH10B_1100 - IS3 element protein InsF 1020 50.16 0 1149625..1149933 - 102 170080683 insE-4 ECDH10B_1101 - IS3 element protein InsE 1021 40.53 -2 1150330..1151316 + 328 170080684 ycdU ECDH10B_1103 - inner membrane protein 1022 51.22 0 1152554..1153492 + 312 170080685 ycdW ECDH10B_1105 - 2-ketoacid reductase 1023 48.37 0 1153547..1154284 + 245 170080686 ycdX ECDH10B_1106 - zinc-binding hydrolase 1024 53.33 0 1154308..1154862 + 184 170080687 ycdY ECDH10B_1107 - hypothetical protein 1025 53.86 0 1154964..1155455 + 163 170080688 ycdZ ECDH10B_1108 - inner membrane protein 1026 50.12 0 1155519..1156352 - 277 170080689 csgG ECDH10B_1109 - outer membrane channel lipoprotein 1027 42.45 -1 1156379..1156795 - 138 170080690 csgF ECDH10B_1110 - transport protein 1028 43.08 -1 1156820..1157209 - 129 170080691 csgE ECDH10B_1111 - transport protein 1029 41.78 -1 1157214..1157864 - 216 170080692 csgD ECDH10B_1112 - DNA-binding transcriptional regulator of adhesion determinants 1030 41.89 -1 1158619..1159074 + 151 170080693 csgB ECDH10B_1113 - curlin nucleator protein, minor subunit in curli complex 1031 51.10 0 1159115..1159570 + 151 170080694 csgA ECDH10B_1114 - cryptic curlin major subunit 1032 42.64 -1 1159629..1159961 + 110 170080695 csgC ECDH10B_1115 - curli production protein 1033 43.59 -1 1160082..1160393 + 103 170080696 ymdA ECDH10B_1116 - hypothetical protein 1034 51.69 0 1160488..1161021 + 177 170080697 ymdB ECDH10B_1117 - hypothetical protein 1035 50.70 0 1161023..1162444 + 473 170080698 ymdC ECDH10B_1118 - hydrolase 1036 43.87 -1 1162452..1163609 - 385 170080699 mdoC ECDH10B_1119 - membrane protein required for modification of periplasmic glucan 1037 49.87 0 1164003..1165538 + 511 170080700 mdoG ECDH10B_1120 - glucan biosynthesis protein, periplasmic 1038 54.87 0 1165531..1168074 + 847 170080701 mdoH ECDH10B_1121 - membrane glycosyltransferase 1039 50.44 0 1168247..1168474 + 75 170080702 yceK ECDH10B_1122 - lipoprotein 1040 50.13 0 1168475..1168849 - 124 170080703 msyB ECDH10B_1123 - hypothetical protein 1041 52.49 0 1168932..1170158 - 408 170080704 mdtG ECDH10B_1124 - drug efflux system 1042 52.99 0 1170330..1171250 - 306 170080705 lpxL ECDH10B_1125 - lauryl-acyl carrier protein (ACP)-dependent acyltransferase 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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