version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 906 51.19 0 1015146..1016819 + 557 170080569 rpsA ECDH10B_0981 - 30S ribosomal subunit protein S1 907 49.12 0 1016979..1017263 + 94 170080570 ihfB ECDH10B_0982 - integration host factor (IHF), DNA-binding protein, beta subunit 908 49.49 0 1017471..1019735 + 754 170080571 ycaI ECDH10B_0983 - inner membrane protein 909 50.89 0 1019772..1021520 + 582 170080572 msbA ECDH10B_0984 - lipid ABC transporter membrane protein; ATP-binding protein 910 54.61 0 1021517..1022503 + 328 170080573 lpxK ECDH10B_0985 - lipid A 4'kinase 911 52.31 0 1022540..1023772 + 410 170080574 ycaQ ECDH10B_0986 - hypothetical protein 912 48.09 0 1023824..1024006 + 60 170080575 ycaR ECDH10B_0987 - hypothetical protein 913 52.74 0 1024003..1024749 + 248 170080576 kdsB ECDH10B_0988 - 3-deoxy-manno-octulosonate cytidylyltransferase 914 52.46 0 1024903..1025796 + 297 170080577 ycbJ ECDH10B_0989 - hypothetical protein 915 52.18 0 1025773..1026552 - 259 170080578 ycbC ECDH10B_0990 - inner membrane protein 916 51.53 0 1026688..1027473 + 261 170080579 smtA ECDH10B_0991 - S-adenosyl-L-methionine-dependent methyltransferase 917 52.83 0 1027470..1028792 + 440 170080580 mukF ECDH10B_0992 - involved in chromosome partioning, Ca2+ binding protein 918 52.36 0 1028800..1029477 + 225 170080581 mukE ECDH10B_0993 - MukE 919 55.66 0 1029477..1033937 + 1486 170080582 mukB ECDH10B_0994 - fused chromosome partitioning protein: nucleotide hydrolase; protein; protein 920 53.14 0 1034198..1036045 + 615 170080583 ycbB ECDH10B_0995 - carboxypeptidase 921 49.73 0 1036226..1036774 + 182 170080584 ycbK ECDH10B_0996 - hypothetical protein 922 51.54 0 1036801..1037448 + 215 170080585 ycbL ECDH10B_0997 - metal-binding protein 923 52.23 0 1037670..1038860 - 396 170080586 aspC ECDH10B_0998 - aspartate aminotransferase, PLP-dependent 924 47.75 0 1039045..1040133 - 362 170080587 ompF ECDH10B_0999 - outer membrane porin 1a (Ia;b;F) 925 52.39 0 1040736..1042136 - 466 170080588 asnS ECDH10B_1000 - asparaginyl tRNA synthetase 926 51.21 0 1042305..1043507 - 400 170080589 pncB ECDH10B_1001 - nicotinate phosphoribosyltransferase 927 53.46 0 1043773..1046385 + 870 170080590 pepN ECDH10B_1002 - aminopeptidase N 928 55.60 0 1046428..1047195 - 255 170080591 ssuB ECDH10B_1003 - alkanesulfonate ABC transporter ATP-binding protein 929 55.81 0 1047192..1047983 - 263 170080592 ssuC ECDH10B_1004 - alkanesulfonate ABC transporter membrane protein 930 56.98 +1 1047994..1049139 - 381 170080593 ssuD ECDH10B_1005 - alkanesulfonate monooxygenase, FMNH(2)-dependent 931 52.40 0 1049136..1050095 - 319 170080594 ssuA ECDH10B_1006 - alkanesulfonate ABC transporter periplasmic-binding protein 932 54.17 0 1050088..1050663 - 191 170080595 ssuE ECDH10B_1007 - NAD(P)H-dependent FMN reductase 933 42.41 -1 1051019..1051558 + 179 170080596 ycbQ ECDH10B_1008 - fimbrial-like adhesin protein 934 45.01 -1 1051641..1052342 + 233 170080597 ycbR ECDH10B_1009 - periplasmic pilin chaperone 935 47.87 0 1052367..1054967 + 866 170080598 ycbS ECDH10B_1010 - outer membrane usher protein 936 48.27 0 1054958..1056028 + 356 170080599 ycbT ECDH10B_1011 - fimbrial-like adhesin protein 937 46.96 0 1056040..1056582 + 180 170080600 ycbU ECDH10B_1012 - fimbrial-like adhesin protein 938 47.29 0 1056590..1057105 + 171 170080601 ycbV ECDH10B_1013 - fimbrial-like adhesin protein 939 51.76 0 1057098..1057808 + 236 170080602 ycbF ECDH10B_1014 - periplasmic pilini chaperone 940 46.98 0 1057919..1058929 + 336 170080603 pyrD ECDH10B_1015 - dihydro-orotate oxidase, FMN-linked 941 49.36 0 1059103..1059645 + 180 170080604 ycbW ECDH10B_1016 - hypothetical protein 942 50.45 0 1059642..1060751 - 369 170080605 ycbX ECDH10B_1017 - 2Fe-2S cluster-containing protein 943 54.24 0 1060995..1063103 + 702 170080606 rlmL ECDH10B_1018 - 23S rRNA m2G2445 methyltransferase 944 52.41 0 1063115..1065022 + 635 170080607 uup ECDH10B_1019 - ABC transporter ATP-binding protein 945 52.23 0 1065152..1066405 + 417 170080608 pqiA ECDH10B_1020 - paraquat-inducible membrane protein A 946 50.21 0 1066410..1068050 + 546 170080609 pqiB ECDH10B_1021 - paraquat-inducible protein B 947 52.13 0 1068047..1068610 + 187 170080610 ymbA ECDH10B_1022 - hypothetical protein 948 54.17 0 1068866..1069033 + 55 170080611 rmf ECDH10B_1023 - ribosome modulation factor 949 53.18 0 1069103..1069621 - 172 170080612 fabA ECDH10B_1024 - beta-hydroxydecanoyl thioester dehydrase 950 51.79 0 1069690..1071450 - 586 170080613 ycbZ ECDH10B_1025 - peptidase 951 46.14 -1 1071636..1072088 + 150 170080614 ycbG ECDH10B_1026 - hypothetical protein 952 53.79 0 1072164..1073204 - 346 170080615 ompA ECDH10B_1027 - outer membrane protein A (3a;II*;G;d) 953 48.24 0 1073561..1074070 - 169 170080616 sulA ECDH10B_1028 - SOS cell division inhibitor 954 48.10 0 1074289..1074918 + 209 170080617 sxy ECDH10B_1029 - CRP-S promoter co-activator 955 52.23 0 1074881..1077034 - 717 170080618 yccS ECDH10B_1030 - inner membrane protein 956 48.32 0 1077053..1077499 - 148 170080619 yccF ECDH10B_1031 - inner membrane protein 957 53.04 0 1077622..1079676 + 684 170080620 helD ECDH10B_1032 - DNA helicase IV 958 52.72 0 1079708..1080166 - 152 170080621 mgsA ECDH10B_1033 - methylglyoxal synthase 959 50.68 0 1080262..1080924 - 220 170080622 yccT ECDH10B_1034 - hypothetical protein 960 54.35 0 1081097..1081510 + 137 170080623 yccU ECDH10B_1035 - CoA-binding protein 961 55.66 0 1081555..1081872 - 105 170080624 hspQ ECDH10B_1036 - DNA-binding protein, hemimethylated 962 51.81 0 1081930..1083120 - 396 170080625 yccW ECDH10B_1037 - methyltransferase 963 52.33 0 1083215..1083493 + 92 170080626 yccX ECDH10B_1038 - acylphosphatase 964 46.67 0 1083490..1083819 - 109 170080627 yccK ECDH10B_1039 - sulfur transfer protein 965 51.21 0 1083910..1084569 - 219 170080628 yccA ECDH10B_1040 - inner membrane protein 966 56.12 +1 1085290..1086408 + 372 170080629 hyaA ECDH10B_1042 - hydrogenase 1, small subunit 967 56.52 +1 1086405..1088198 + 597 170080630 hyaB ECDH10B_1043 - hydrogenase 1, large subunit 968 51.84 0 1088217..1088924 + 235 170080631 hyaC ECDH10B_1044 - hydrogenase 1, b-type cytochrome subunit 969 58.84 +1 1088921..1089508 + 195 170080632 hyaD ECDH10B_1045 - hypothetical protein 970 56.64 +1 1089505..1089903 + 132 170080633 hyaE ECDH10B_1046 - HyaE 971 54.90 0 1089900..1090757 + 285 170080634 hyaF ECDH10B_1047 - HyaF 972 54.05 0 1090891..1092435 + 514 170080635 appC ECDH10B_1048 - cytochrome bd-II oxidase, subunit I 973 53.12 0 1092447..1093583 + 378 170080636 appB ECDH10B_1049 - cytochrome bd-II oxidase, subunit II 974 53.89 0 1093768..1095066 + 432 170080637 appA ECDH10B_1050 - phosphoanhydride phosphorylase 975 50.53 0 1095181..1097361 - 726 170080638 etk ECDH10B_1051 - cryptic autophosphorylating protein tyrosine kinase Etk 976 52.35 0 1097381..1097827 - 148 170080639 etp ECDH10B_1052 - phosphotyrosine-protein phosphatase 977 50.96 0 1097815..1098954 - 379 170080640 gfcE ECDH10B_1053 - exopolysaccharide export protein 978 51.98 0 1099000..1101096 - 698 170080641 gfcD ECDH10B_1054 - hypothetical protein 979 52.34 0 1101096..1101842 - 248 170080642 gfcC ECDH10B_1055 - hypothetical protein 980 47.60 0 1101839..1102483 - 214 170080643 gfcB ECDH10B_1056 - outer membrane lipoprotein 981 57.52 +1 1102590..1102895 - 101 170080644 gfcA ECDH10B_1057 - hypothetical protein 982 52.90 0 1102984..1103259 + 91 170080645 insA-4 ECDH10B_1058 - IS1 repressor protein InsA 983 54.76 0 1103178..1103681 + 167 170080646 insB-4 ECDH10B_1059 - IS1 transposase InsAB' 984 46.95 0 1104114..1104326 - 70 170080647 cspH ECDH10B_1060 - CspA family stress protein 985 44.13 -1 1104612..1104824 + 70 170080648 cspG ECDH10B_1061 - DNA-binding transcriptional regulator 986 41.56 -2 1104998..1105228 + 76 170080649 ymcE ECDH10B_1062 - cold shock gene 987 39.66 -2 1105218..1105391 + 57 170080650 gnsA ECDH10B_1063 - regulator of phosphatidylethanolamine synthesis 988 49.16 0 1105440..1106513 - 357 170080651 yccM ECDH10B_1064 - 4Fe-4S membrane protein 989 53.77 0 1106585..1109329 - 914 170080652 torS ECDH10B_1065 - hybrid sensory histidine kinase in two-component regulatory system with TorR 990 53.45 0 1109412..1110440 + 342 170080653 torT ECDH10B_1066 - periplasmic sensory protein associated with the TorRS two-component regulatory system 991 52.38 0 1110413..1111105 - 230 170080654 torR ECDH10B_1067 - DNA-binding response regulator in two-component regulatory system with TorS 992 51.24 0 1111235..1112407 + 390 170080655 torC ECDH10B_1068 - trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit 993 55.32 0 1112407..1114953 + 848 170080656 torA ECDH10B_1069 - trimethylamine N-oxide (TMAO) reductase I, catalytic subunit 994 53.17 0 1114950..1115549 + 199 170080657 torD ECDH10B_1070 - chaperone involved in maturation of TorA subunit of trimethylamine N-oxide reductase system I 995 54.25 0 1115701..1116006 - 101 170080658 cbpM ECDH10B_1071 - modulator of CbpA co-chaperone 996 52.88 0 1116006..1116926 - 306 170080659 cbpA ECDH10B_1072 - curved DNA-binding protein 997 34.13 -2 1117187..1118443 + 418 170080660 yccE ECDH10B_1073 - hypothetical protein 998 51.61 0 1118736..1119977 + 413 170080661 agp ECDH10B_1074 - glucose-1-phosphatase/inositol phosphatase 999 46.93 0 1120015..1120242 - 75 170080662 yccJ ECDH10B_1075 - hypothetical protein 1000 53.94 0 1120263..1120859 - 198 170080663 wrbA ECDH10B_1076 - flavoprotein in Trp regulation 1001 51.15 0 1121232..1121405 + 57 170080664 ymdF ECDH10B_1077 - hypothetical protein 1002 54.03 0 1121662..1122990 - 442 170080665 rutG ECDH10B_1078 - pyrimidine transporter 1003 58.99 +1 1123011..1123505 - 164 170080666 rutF ECDH10B_1079 - oxidoreductase, flavin:NADH component 1004 57.19 +1 1123516..1124106 - 196 170080667 rutE ECDH10B_1080 - oxidoreductase 1005 57.93 +1 1124116..1124916 - 266 170080668 rutD ECDH10B_1081 - hydrolase 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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