version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 862 54.01 0 957744..958067 + 107 170080525 ybjQ ECDH10B_0936 - hypothetical protein 863 56.08 +1 958064..958894 + 276 170080526 ybjR ECDH10B_0937 - amidase and lipoprotein 864 54.44 0 958891..959904 - 337 170080527 ybjS ECDH10B_0938 - NAD(P)-binding oxidoreductase 865 55.00 0 960003..961433 - 476 170080528 ybjT ECDH10B_0939 - hypothetical protein 866 56.19 +1 961444..962445 - 333 170080529 ltaE ECDH10B_0940 - L-allo-threonine aldolase, PLP-dependent 867 54.04 0 962482..964200 - 572 170080530 poxB ECDH10B_0941 - pyruvate dehydrogenase (pyruvate oxidase), thiamin-dependent, FAD-binding 868 55.42 0 964333..965301 - 322 170080531 hcr ECDH10B_0942 - HCP oxidoreductase, NADH-dependent 869 54.75 0 965313..966965 - 550 170080532 hcp ECDH10B_0943 - hybrid-cluster [4Fe-2S-2O] protein in anaerobic terminal reductases 870 48.22 0 967109..968008 - 299 170080533 ybjE ECDH10B_0944 - transporter 871 52.30 0 968503..969198 - 231 170080534 aqpZ ECDH10B_0945 - aquaporin 872 53.04 0 969624..971282 + 552 170080535 ybjD ECDH10B_0946 - hypothetical protein 873 49.95 0 971279..972271 - 330 170080536 ybjX ECDH10B_0947 - hypothetical protein 874 53.05 0 972386..973501 + 371 170080537 macA ECDH10B_0948 - macrolide transporter subunit, membrane fusion protein (MFP) component 875 53.93 0 973498..975444 + 648 170080538 macB ECDH10B_0949 - macrolide ABC transporter ATP-binding/membrane protein 876 48.44 0 975517..975741 - 74 170080539 cspD ECDH10B_0950 - cold shock protein-like protein 877 45.17 -1 976064..976384 + 106 170080540 clpS ECDH10B_0951 - regulatory protein for ClpA substrate specificity 878 52.61 0 976415..978691 + 758 170080541 clpA ECDH10B_0952 - ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity 879 48.40 0 979376..979594 - 72 170080542 infA ECDH10B_0954 - translation initiation factor IF-1 880 54.04 0 979879..980583 - 234 170080543 aat ECDH10B_0955 - leucyl/phenylalanyl-tRNA-protein transferase 881 53.77 0 980625..982346 - 573 170080544 cydC ECDH10B_0956 - cysteine ABC transporter ATP-binding protein 882 53.65 0 982347..984113 - 588 170080545 cydD ECDH10B_0957 - cysteine ABC transporter ATP-binding protein 883 53.62 0 984236..985201 - 321 170080546 trxB ECDH10B_0958 - thioredoxin reductase, FAD/NAD(P)-binding 884 47.88 0 985746..986240 + 164 170080547 lrp ECDH10B_0959 - DNA-binding transcriptional dual regulator, leucine-binding 885 54.01 0 986375..990364 + 1329 170080548 ftsK ECDH10B_0960 - DNA-binding membrane protein required for chromosome resolution and partitioning 886 50.98 0 990523..991134 + 203 170080549 lolA ECDH10B_0961 - chaperone for lipoproteins 887 53.57 0 991145..992488 + 447 170080550 ycaJ ECDH10B_0962 - recombination protein 888 52.67 0 992579..993871 + 430 170080551 serS ECDH10B_0963 - seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine 889 52.72 0 994110..996554 + 814 170080552 dmsA ECDH10B_0964 - dimethyl sulfoxide reductase, anaerobic, subunit A 890 51.78 0 996565..997182 + 205 170080553 dmsB ECDH10B_0965 - dimethyl sulfoxide reductase, anaerobic, subunit B 891 54.63 0 997184..998047 + 287 170080554 dmsC ECDH10B_0966 - dimethyl sulfoxide reductase, anaerobic, subunit C 892 46.25 -1 998082..998708 - 208 170080555 ycaC ECDH10B_0967 - hydrolase 893 52.05 0 999022..1000170 + 382 170080556 ycaD ECDH10B_0968 - transporter 894 47.17 0 1000380..1001810 + 476 170080557 ycaM ECDH10B_0969 - transporter 895 46.64 0 1001811..1002719 - 302 170080558 ycaN ECDH10B_0970 - DNA-binding transcriptional regulator 896 42.81 -1 1002819..1003409 + 196 170080559 ycaK ECDH10B_0971 - hypothetical protein 897 50.34 0 1003491..1004231 - 246 170080560 pflA ECDH10B_0972 - pyruvate formate lyase activating enzyme 1 898 51.20 0 1004423..1006705 - 760 170080561 pflB ECDH10B_0973 - pyruvate formate lyase I 899 48.95 0 1006760..1007617 - 285 170080562 focA ECDH10B_0974 - formate transporter 900 51.56 0 1008023..1009783 - 586 170080563 ycaO ECDH10B_0975 - hypothetical protein 901 47.62 0 1009913..1010605 + 230 170080564 ycaP ECDH10B_0976 - inner membrane protein 902 50.14 0 1010804..1011892 + 362 170080565 serC ECDH10B_0977 - 3-phosphoserine/phosphohydroxythreonine aminotransferase 903 50.78 0 1011963..1013246 + 427 170080566 aroA ECDH10B_0978 - 5-enolpyruvylshikimate-3-phosphate synthetase 904 49.93 0 1013415..1014179 + 254 170080567 ycaL ECDH10B_0979 - peptidase with chaperone function 905 53.65 0 1014352..1015035 + 227 170080568 cmk ECDH10B_0980 - cytidylate kinase 906 51.19 0 1015146..1016819 + 557 170080569 rpsA ECDH10B_0981 - 30S ribosomal subunit protein S1 907 49.12 0 1016979..1017263 + 94 170080570 ihfB ECDH10B_0982 - integration host factor (IHF), DNA-binding protein, beta subunit 908 49.49 0 1017471..1019735 + 754 170080571 ycaI ECDH10B_0983 - inner membrane protein 909 50.89 0 1019772..1021520 + 582 170080572 msbA ECDH10B_0984 - lipid ABC transporter membrane protein; ATP-binding protein 910 54.61 0 1021517..1022503 + 328 170080573 lpxK ECDH10B_0985 - lipid A 4'kinase 911 52.31 0 1022540..1023772 + 410 170080574 ycaQ ECDH10B_0986 - hypothetical protein 912 48.09 0 1023824..1024006 + 60 170080575 ycaR ECDH10B_0987 - hypothetical protein 913 52.74 0 1024003..1024749 + 248 170080576 kdsB ECDH10B_0988 - 3-deoxy-manno-octulosonate cytidylyltransferase 914 52.46 0 1024903..1025796 + 297 170080577 ycbJ ECDH10B_0989 - hypothetical protein 915 52.18 0 1025773..1026552 - 259 170080578 ycbC ECDH10B_0990 - inner membrane protein 916 51.53 0 1026688..1027473 + 261 170080579 smtA ECDH10B_0991 - S-adenosyl-L-methionine-dependent methyltransferase 917 52.83 0 1027470..1028792 + 440 170080580 mukF ECDH10B_0992 - involved in chromosome partioning, Ca2+ binding protein 918 52.36 0 1028800..1029477 + 225 170080581 mukE ECDH10B_0993 - MukE 919 55.66 0 1029477..1033937 + 1486 170080582 mukB ECDH10B_0994 - fused chromosome partitioning protein: nucleotide hydrolase; protein; protein 920 53.14 0 1034198..1036045 + 615 170080583 ycbB ECDH10B_0995 - carboxypeptidase 921 49.73 0 1036226..1036774 + 182 170080584 ycbK ECDH10B_0996 - hypothetical protein 922 51.54 0 1036801..1037448 + 215 170080585 ycbL ECDH10B_0997 - metal-binding protein 923 52.23 0 1037670..1038860 - 396 170080586 aspC ECDH10B_0998 - aspartate aminotransferase, PLP-dependent 924 47.75 0 1039045..1040133 - 362 170080587 ompF ECDH10B_0999 - outer membrane porin 1a (Ia;b;F) 925 52.39 0 1040736..1042136 - 466 170080588 asnS ECDH10B_1000 - asparaginyl tRNA synthetase 926 51.21 0 1042305..1043507 - 400 170080589 pncB ECDH10B_1001 - nicotinate phosphoribosyltransferase 927 53.46 0 1043773..1046385 + 870 170080590 pepN ECDH10B_1002 - aminopeptidase N 928 55.60 0 1046428..1047195 - 255 170080591 ssuB ECDH10B_1003 - alkanesulfonate ABC transporter ATP-binding protein 929 55.81 0 1047192..1047983 - 263 170080592 ssuC ECDH10B_1004 - alkanesulfonate ABC transporter membrane protein 930 56.98 +1 1047994..1049139 - 381 170080593 ssuD ECDH10B_1005 - alkanesulfonate monooxygenase, FMNH(2)-dependent 931 52.40 0 1049136..1050095 - 319 170080594 ssuA ECDH10B_1006 - alkanesulfonate ABC transporter periplasmic-binding protein 932 54.17 0 1050088..1050663 - 191 170080595 ssuE ECDH10B_1007 - NAD(P)H-dependent FMN reductase 933 42.41 -1 1051019..1051558 + 179 170080596 ycbQ ECDH10B_1008 - fimbrial-like adhesin protein 934 45.01 -1 1051641..1052342 + 233 170080597 ycbR ECDH10B_1009 - periplasmic pilin chaperone 935 47.87 0 1052367..1054967 + 866 170080598 ycbS ECDH10B_1010 - outer membrane usher protein 936 48.27 0 1054958..1056028 + 356 170080599 ycbT ECDH10B_1011 - fimbrial-like adhesin protein 937 46.96 0 1056040..1056582 + 180 170080600 ycbU ECDH10B_1012 - fimbrial-like adhesin protein 938 47.29 0 1056590..1057105 + 171 170080601 ycbV ECDH10B_1013 - fimbrial-like adhesin protein 939 51.76 0 1057098..1057808 + 236 170080602 ycbF ECDH10B_1014 - periplasmic pilini chaperone 940 46.98 0 1057919..1058929 + 336 170080603 pyrD ECDH10B_1015 - dihydro-orotate oxidase, FMN-linked 941 49.36 0 1059103..1059645 + 180 170080604 ycbW ECDH10B_1016 - hypothetical protein 942 50.45 0 1059642..1060751 - 369 170080605 ycbX ECDH10B_1017 - 2Fe-2S cluster-containing protein 943 54.24 0 1060995..1063103 + 702 170080606 rlmL ECDH10B_1018 - 23S rRNA m2G2445 methyltransferase 944 52.41 0 1063115..1065022 + 635 170080607 uup ECDH10B_1019 - ABC transporter ATP-binding protein 945 52.23 0 1065152..1066405 + 417 170080608 pqiA ECDH10B_1020 - paraquat-inducible membrane protein A 946 50.21 0 1066410..1068050 + 546 170080609 pqiB ECDH10B_1021 - paraquat-inducible protein B 947 52.13 0 1068047..1068610 + 187 170080610 ymbA ECDH10B_1022 - hypothetical protein 948 54.17 0 1068866..1069033 + 55 170080611 rmf ECDH10B_1023 - ribosome modulation factor 949 53.18 0 1069103..1069621 - 172 170080612 fabA ECDH10B_1024 - beta-hydroxydecanoyl thioester dehydrase 950 51.79 0 1069690..1071450 - 586 170080613 ycbZ ECDH10B_1025 - peptidase 951 46.14 -1 1071636..1072088 + 150 170080614 ycbG ECDH10B_1026 - hypothetical protein 952 53.79 0 1072164..1073204 - 346 170080615 ompA ECDH10B_1027 - outer membrane protein A (3a;II*;G;d) 953 48.24 0 1073561..1074070 - 169 170080616 sulA ECDH10B_1028 - SOS cell division inhibitor 954 48.10 0 1074289..1074918 + 209 170080617 sxy ECDH10B_1029 - CRP-S promoter co-activator 955 52.23 0 1074881..1077034 - 717 170080618 yccS ECDH10B_1030 - inner membrane protein 956 48.32 0 1077053..1077499 - 148 170080619 yccF ECDH10B_1031 - inner membrane protein 957 53.04 0 1077622..1079676 + 684 170080620 helD ECDH10B_1032 - DNA helicase IV 958 52.72 0 1079708..1080166 - 152 170080621 mgsA ECDH10B_1033 - methylglyoxal synthase 959 50.68 0 1080262..1080924 - 220 170080622 yccT ECDH10B_1034 - hypothetical protein 960 54.35 0 1081097..1081510 + 137 170080623 yccU ECDH10B_1035 - CoA-binding protein 961 55.66 0 1081555..1081872 - 105 170080624 hspQ ECDH10B_1036 - DNA-binding protein, hemimethylated 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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