version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 9 54.42 0 9306..9893 + 195 170079672 mog ECDH10B_0009 - molybdochelatase 10 53.09 0 9928..10494 - 188 170079673 yaaH ECDH10B_0010 - inner membrane protein associated with acetate transport 11 50.84 0 10643..11356 - 237 170079674 yaaW ECDH10B_0011 - hypothetical protein 12 48.15 0 10830..11315 + 161 170079675 htgA ECDH10B_0012 - hypothetical protein 13 48.89 0 11382..11786 - 134 170079676 yaaI ECDH10B_0013 - hypothetical protein 14 51.12 0 12163..14079 + 638 170079677 dnaK ECDH10B_0014 - chaperone Hsp70, co-chaperone with DnaJ 15 55.17 0 14168..15298 + 376 170079678 dnaJ ECDH10B_0015 - chaperone Hsp40, co-chaperone with DnaK 16 51.93 0 15445..16557 + 370 170079679 insL-1 ECDH10B_0016 - IS186/IS421 transposase 17 51.43 0 16751..16960 - 69 170079680 mokC ECDH10B_0017 - regulatory protein for HokC, overlaps CDS of hokC 18 52.94 0 16751..16903 - 50 170079681 hokC ECDH10B_0018 - toxic membrane protein, small 19 51.41 0 17489..18655 + 388 170079682 nhaA ECDH10B_0020 - sodium-proton antiporter 20 47.46 0 18715..19620 + 301 170079683 nhaR ECDH10B_0021 - DNA-binding transcriptional activator 21 54.56 0 19811..20314 - 167 170079684 insB-1 ECDH10B_0022 - IS1 transposase InsAB' 22 52.90 0 20233..20508 - 91 170079685 insA-1 ECDH10B_0023 - IS1 repressor protein InsA 23 46.21 -1 20815..21078 - 87 170079686 rpsT ECDH10B_0024 - 30S ribosomal subunit protein S20 24 48.86 0 21181..21399 + 72 170079687 yaaY ECDH10B_0025 - hypothetical protein 25 53.61 0 21407..22348 + 313 170079688 ribF ECDH10B_0026 - bifunctional riboflavin kinase and FAD synthetase 26 55.77 0 22391..25207 + 938 170079689 ileS ECDH10B_0027 - isoleucyl-tRNA synthetase 27 53.54 0 25207..25701 + 164 170079690 lspA ECDH10B_0028 - prolipoprotein signal peptidase (signal peptidase II) 28 54.44 0 25826..26275 + 149 170079691 fkpB ECDH10B_0029 - FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 29 55.10 0 26277..27227 + 316 170079692 ispH ECDH10B_0030 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein 30 56.28 +1 27293..28207 + 304 170079693 rihC ECDH10B_0031 - ribonucleoside hydrolase 3 31 53.41 0 28374..29195 + 273 170079694 dapB ECDH10B_0032 - dihydrodipicolinate reductase 32 53.35 0 29651..30799 + 382 170079695 carA ECDH10B_0033 - carbamoyl phosphate synthetase small subunit, glutamine amidotransferase 33 56.27 +1 30817..34038 + 1073 170079696 carB ECDH10B_0034 - carbamoyl-phosphate synthase large subunit 34 45.96 -1 34300..34695 + 131 170079697 caiF ECDH10B_0035 - DNA-binding transcriptional activator 35 54.99 0 34781..35371 - 196 170079698 caiE ECDH10B_0036 - acyl transferase 36 52.35 0 35377..36270 - 297 170079699 caiD ECDH10B_0037 - crotonobetainyl CoA hydratase 37 50.99 0 36271..37839 - 522 170079700 caiC ECDH10B_0038 - crotonobetaine CoA ligase:carnitine CoA ligase 38 52.63 0 37898..39115 - 405 170079701 caiB ECDH10B_0039 - crotonobetainyl CoA:carnitine CoA transferase 39 53.89 0 39244..40386 - 380 170079702 caiA ECDH10B_0040 - crotonobetaine reductase subunit II, FAD-binding 40 51.82 0 40417..41931 - 504 170079703 caiT ECDH10B_0041 - transporter 41 52.53 0 42403..43173 + 256 170079704 fixA ECDH10B_0042 - electron transfer flavoprotein subunit 42 56.69 +1 43188..44129 + 313 170079705 fixB ECDH10B_0043 - electron transfer flavoprotein subunit 43 54.93 0 44180..45466 + 428 170079706 fixC ECDH10B_0044 - oxidoreductase 44 56.94 +1 45463..45750 + 95 170079707 fixX ECDH10B_0045 - 4Fe-4S ferredoxin-type protein 45 53.30 0 45807..47138 + 443 170079708 yaaU ECDH10B_0046 - transporter 46 54.61 0 47246..47776 + 176 170079709 kefF ECDH10B_0047 - flavoprotein subunit for the KefC potassium efflux system 47 55.50 0 47769..49631 + 620 170079710 kefC ECDH10B_0048 - potassium:proton antiporter 48 52.71 0 49823..50302 + 159 170079711 folA ECDH10B_0049 - dihydrofolate reductase 49 55.75 0 50380..51222 - 280 170079712 apaH ECDH10B_0050 - diadenosine tetraphosphatase 50 51.85 0 51229..51606 - 125 170079713 apaG ECDH10B_0051 - protein associated with Co2+ and Mg2+ efflux 51 53.04 0 51609..52430 - 273 170079714 ksgA ECDH10B_0052 - S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase 52 56.36 +1 52427..53416 - 329 170079715 pdxA ECDH10B_0053 - 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent 53 53.85 0 53416..54702 - 428 170079716 surA ECDH10B_0054 - peptidyl-prolyl cis-trans isomerase (PPIase) 54 51.38 0 54755..57109 - 784 170079717 imp ECDH10B_0055 - exported protein required for envelope biosynthesis and integrity 55 52.70 0 57364..58179 + 271 170079718 djlA ECDH10B_0056 - DnaJ-like protein, membrane anchored 56 53.94 0 59687..60346 - 219 170079719 rluA ECDH10B_0060 - pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) 57 52.51 0 63738..64196 + 152 170079720 mraZ ECDH10B_0063 - hypothetical protein 58 55.41 0 64198..65139 + 313 170079721 mraW ECDH10B_0064 - S-adenosyl-dependent methyltransferase activity on membrane-located substrates 59 50.27 0 65136..65501 + 121 170079722 ftsL ECDH10B_0065 - membrane bound cell division protein 60 53.88 0 65517..67283 + 588 170079723 ftsI ECDH10B_0066 - transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) 61 56.52 +1 67270..68757 + 495 170079724 murE ECDH10B_0067 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-diaminopimelate ligase 62 55.11 0 68754..70112 + 452 170079725 murF ECDH10B_0068 - UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase 63 53.37 0 70106..71188 + 360 170079726 mraY ECDH10B_0069 - phospho-N-acetylmuramoyl-pentapeptide transferase 64 54.90 0 71191..72507 + 438 170079727 murD ECDH10B_0070 - UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 65 53.01 0 72507..73751 + 414 170079728 ftsW ECDH10B_0071 - cell division membrane protein 66 56.09 +1 73748..74815 + 355 170079729 murG ECDH10B_0072 - N-acetylglucosaminyl transferase 67 54.74 0 74869..76344 + 491 170079730 murC ECDH10B_0073 - UDP-N-acetylmuramate:L-alanine ligase 68 51.57 0 76337..77257 + 306 170079731 ddlB ECDH10B_0074 - D-alanine:D-alanine ligase 69 53.31 0 77259..78089 + 276 170079732 ftsQ ECDH10B_0075 - membrane anchored protein involved in growth of wall at septum 70 52.10 0 78086..79348 + 420 170079733 ftsA ECDH10B_0076 - cell division protein 71 54.17 0 79409..80560 + 383 170079734 ftsZ ECDH10B_0077 - GTP-binding tubulin-like cell division protein 72 51.09 0 80661..81578 + 305 170079735 lpxC ECDH10B_0078 - UDP-3-O-acyl N-acetylglucosamine deacetylase 73 54.00 0 81809..82321 + 170 170079736 secM ECDH10B_0079 - regulator of secA translation 74 52.40 0 82383..85088 + 901 170079737 secA ECDH10B_0080 - preprotein translocase subunit, ATPase 75 49.23 0 85148..85537 + 129 170079738 mutT ECDH10B_0081 - nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP 76 51.52 0 85753..85950 - 65 170079739 yacG ECDH10B_0082 - zinc-binding protein 77 51.48 0 85960..86703 - 247 170079740 yacF ECDH10B_0083 - hypothetical protein 78 52.66 0 86703..87323 - 206 170079741 coaE ECDH10B_0084 - dephospho-CoA kinase 79 51.34 0 87548..88591 + 347 170079742 guaC ECDH10B_0085 - GMP reductase 80 51.95 0 88626..89828 - 400 170079743 hofC ECDH10B_0086 - assembly protein in type IV pilin biogenesis, transmembrane protein 81 53.46 0 89818..91203 - 461 170079744 hofB ECDH10B_0087 - hypothetical protein 82 53.06 0 91213..91653 - 146 170079745 ppdD ECDH10B_0088 - major pilin subunit 83 53.13 0 91856..92749 - 297 170079746 nadC ECDH10B_0089 - quinolinate phosphoribosyltransferase 84 53.80 0 92837..93388 + 183 170079747 ampD ECDH10B_0090 - N-acetyl-anhydromuranmyl-L-alanine amidase 85 52.05 0 93385..94239 + 284 170079748 ampE ECDH10B_0091 - inner membrane protein 86 52.69 0 94282..95655 - 457 170079749 aroP ECDH10B_0092 - aromatic amino acid transporter 87 55.82 0 96196..96960 + 254 170079750 pdhR ECDH10B_0093 - DNA-binding transcriptional dual regulator 88 53.04 0 97121..99784 + 887 170079751 aceE ECDH10B_0094 - pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding 89 54.68 0 99799..101691 + 630 170079752 aceF ECDH10B_0095 - pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 90 53.05 0 102016..103440 + 474 170079753 lpd ECDH10B_0096 - lipoamide dehydrogenase, E3 component IS part of three enzyme complexes 91 53.88 0 103511..105364 - 617 170079754 yacH ECDH10B_0097 - hypothetical protein 92 55.89 +1 105719..108316 + 865 170079755 acnB ECDH10B_0098 - bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase 93 52.07 0 108492..108854 + 120 170079756 yacL ECDH10B_0099 - hypothetical protein 94 46.16 -1 108892..109686 - 264 170079757 speD ECDH10B_0100 - S-adenosylmethionine decarboxylase 95 50.75 0 109702..110568 - 288 170079758 speE ECDH10B_0101 - spermidine synthase (putrescine aminopropyltransferase) 96 50.00 0 110674..111021 - 115 170079759 yacC ECDH10B_0102 - hypothetical protein 97 54.67 0 111187..112737 + 516 170079760 cueO ECDH10B_0103 - multicopper oxidase (laccase) 98 55.42 0 112939..115329 - 796 170079761 gcd ECDH10B_0104 - glucose dehydrogenase 99 50.65 0 115535..116071 + 178 170079762 hpt ECDH10B_0105 - hypoxanthine phosphoribosyltransferase 100 50.68 0 116112..116774 - 220 170079763 can ECDH10B_0106 - carbonic anhydrase 101 49.62 0 116883..117809 + 308 170079764 yadG ECDH10B_0107 - ABC transporter ATP-binding protein 102 50.71 0 117806..118576 + 256 170079765 yadH ECDH10B_0108 - ABC transporter membrane protein 103 49.21 0 118681..119121 + 146 170079766 yadI ECDH10B_0109 - PTS enzyme IIA 104 49.51 0 119185..120414 + 409 170079767 yadE ECDH10B_0110 - polysaccharide deacetylase lipoprotein 105 52.49 0 120418..120798 - 126 170079768 panD ECDH10B_0111 - aspartate 1-decarboxylase 106 48.84 0 121072..121974 + 300 170079769 yadD ECDH10B_0112 - transposase 107 52.70 0 122048..122899 - 283 170079770 panC ECDH10B_0113 - pantothenate synthetase 108 54.59 0 122911..123705 - 264 170079771 panB ECDH10B_0114 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0