version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 388 48.15 0 428665..428826 - 53 170080051 ybaM ECDH10B_0422 - hypothetical protein 389 58.90 +1 428840..429367 - 175 170080052 priC ECDH10B_0423 - primosomal replication protein N'' 390 52.12 0 429437..429814 + 125 170080053 ybaN ECDH10B_0424 - inner membrane protein 391 54.35 0 429967..430518 + 183 170080054 apt ECDH10B_0425 - adenine phosphoribosyltransferase 392 57.66 +1 430647..432578 + 643 170080055 dnaX ECDH10B_0426 - DNA polymerase III/DNA elongation factor III, tau and gamma subunits 393 52.73 0 432631..432960 + 109 170080056 ybaB ECDH10B_0427 - hypothetical protein 394 57.76 +1 432960..433565 + 201 170080057 recR ECDH10B_0428 - gap repair protein 395 52.85 0 433675..435549 + 624 170080058 htpG ECDH10B_0429 - HSP90 family molecular chaperone 396 51.78 0 435730..436374 + 214 170080059 adk ECDH10B_0430 - adenylate kinase 397 53.89 0 436610..437572 + 320 170080060 hemH ECDH10B_0431 - ferrochelatase 398 52.08 0 437569..438528 - 319 170080061 aes ECDH10B_0432 - acetyl esterase 399 51.88 0 438680..439984 + 434 170080062 gsk ECDH10B_0433 - inosine/guanosine kinase 400 55.46 0 440117..441793 - 558 170080063 ybaL ECDH10B_0434 - transporter 401 52.42 0 442031..443251 - 406 170080064 fsr ECDH10B_0435 - fosmidomycin efflux system 402 50.88 0 443469..445121 + 550 170080065 ushA ECDH10B_0436 - bifunctional UDP-sugar hydrolase and 5'-nucleotidase 403 50.83 0 445158..445637 - 159 170080066 ybaK ECDH10B_0437 - bifunctional cys-tRNA Pro deacetylase and cys-tRNA Cys deacylase 404 54.09 0 445841..446635 - 264 170080067 ybaP ECDH10B_0439 - hypothetical protein 405 44.74 -1 446773..447114 + 113 170080068 ybaQ ECDH10B_0440 - DNA-binding transcriptional regulator 406 58.28 +1 447430..449934 - 834 170080069 copA ECDH10B_0441 - copper transporter 407 53.16 0 450196..451128 + 310 170080070 ybaS ECDH10B_0442 - glutaminase 408 53.29 0 451131..452423 + 430 170080071 ybaT ECDH10B_0443 - transporter 409 58.58 +1 452548..452955 + 135 170080072 cueR ECDH10B_0444 - DNA-binding transcriptional activator of copper-responsive regulon genes 410 57.46 +1 452956..453411 - 151 170080073 ybbJ ECDH10B_0445 - inner membrane protein 411 52.83 0 453411..454328 - 305 170080074 qmcA ECDH10B_0446 - protease, membrane anchored 412 45.43 -1 454474..455151 + 225 170080075 ybbL ECDH10B_0447 - ABC transporter ATP-binding protein 413 46.15 -1 455138..455917 + 259 170080076 ybbM ECDH10B_0448 - inner membrane protein 414 55.91 +1 455980..456834 - 284 170080077 ybbN ECDH10B_0449 - thioredoxin domain-containing protein 415 54.32 0 456895..457704 - 269 170080078 ybbO ECDH10B_0450 - oxidoreductase 416 52.79 0 457694..458320 - 208 170080079 tesA ECDH10B_0451 - multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 417 56.62 +1 458288..458974 + 228 170080080 ybbA ECDH10B_0452 - ABC transporter ATP-binding protein 418 57.60 +1 458971..461385 + 804 170080081 ybbP ECDH10B_0453 - inner membrane protein 419 60.13 +1 461816..466096 + 1426 170080082 rhsD ECDH10B_0454 - rhsD element protein 420 30.62 -2 466136..466504 + 122 170080083 ybbC ECDH10B_0455 - hypothetical protein 421 44.59 -1 466504..467214 + 236 170080084 ylbH ECDH10B_0456 - protein, rhs-like protein 422 50.27 0 468200..468571 - 123 170080085 ylbG ECDH10B_0458 - DNA-binding transcriptional regulator 423 55.62 0 468687..469781 - 364 170080086 ybbB ECDH10B_0459 - tRNA 2-selenouridine synthase, selenophosphate-dependent 424 52.43 0 469850..470776 - 308 170080087 allS ECDH10B_0460 - DNA-binding transcriptional activator of the allD operon 425 51.14 0 471006..471488 + 160 170080088 allA ECDH10B_0461 - ureidoglycolate hydrolase 426 52.57 0 471566..472381 + 271 170080089 allR ECDH10B_0462 - DNA-binding transcriptional repressor 427 52.92 0 472471..474252 + 593 170080090 gcl ECDH10B_0463 - glyoxylate carboligase 428 44.66 -1 474265..475041 + 258 170080091 hyi ECDH10B_0464 - hydroxypyruvate isomerase 429 50.74 0 475141..476019 + 292 170080092 glxR ECDH10B_0465 - tartronate semialdehyde reductase, NADH-dependent 430 35.48 -2 476051..476329 + 92 170080093 ybbV ECDH10B_0466 - hypothetical protein 431 47.01 0 476188..477642 + 484 170080094 ybbW ECDH10B_0467 - allantoin transporter 432 51.62 0 477702..479063 + 453 170080095 allB ECDH10B_0468 - allantoinase 433 51.23 0 479120..480421 + 433 170080096 ybbY ECDH10B_0469 - uracil/xanthine transporter 434 55.58 0 480443..481588 + 381 170080097 glxK ECDH10B_0470 - glycerate kinase II 435 46.18 -1 481816..482601 - 261 170080098 ylbA ECDH10B_0471 - hypothetical protein 436 51.38 0 482612..483847 - 411 170080099 allC ECDH10B_0472 - allantoate amidohydrolase 437 52.38 0 483869..484918 - 349 170080100 allD ECDH10B_0473 - ureidoglycolate dehydrogenase 438 55.58 0 485235..486902 + 555 170080101 fdrA ECDH10B_0474 - acyl-CoA synthetase 439 57.22 +1 486912..488171 + 419 170080102 ylbE ECDH10B_0475 - hypothetical protein 440 56.86 +1 488182..488997 + 271 170080103 ylbF ECDH10B_0476 - hypothetical protein 441 56.94 +1 488994..489887 + 297 170080104 ybcF ECDH10B_0477 - carbamate kinase 442 56.46 +1 490082..491149 - 355 170080105 purK ECDH10B_0478 - N5-carboxyaminoimidazole ribonucleotide synthase 443 59.02 +1 491146..491655 - 169 170080106 purE ECDH10B_0479 - N5-carboxyaminoimidazole ribonucleotide mutase 444 54.50 0 491773..492495 - 240 170080107 lpxH ECDH10B_0480 - UDP-2,3-diacylglucosamine pyrophosphatase 445 47.88 0 492498..492992 - 164 170080108 ppiB ECDH10B_0481 - peptidyl-prolyl cis-trans isomerase B (rotamase B) 446 54.47 0 493166..494551 + 461 170080109 cysS ECDH10B_0482 - cysteinyl-tRNA synthetase 447 53.07 0 494587..495108 - 173 170080110 ybcI ECDH10B_0483 - inner membrane protein 448 54.93 0 495216..495428 - 70 170080111 ybcJ ECDH10B_0484 - RNA-binding protein 449 54.33 0 495430..496296 - 288 170080112 folD ECDH10B_0485 - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase and 5,10-methylene-tetrahydrofolate cyclohydrolase 450 44.57 -1 496767..497309 + 180 170080113 sfmA ECDH10B_0486 - fimbrial-like adhesin protein 451 42.57 -1 497529..498221 + 230 170080114 sfmC ECDH10B_0487 - pilin chaperone, periplasmic 452 47.81 0 498252..500855 + 867 170080115 sfmD ECDH10B_0488 - outer membrane export usher protein 453 45.53 -1 500891..501874 + 327 170080116 sfmH ECDH10B_0489 - fimbrial-like adhesin protein 454 50.00 0 501885..502400 + 171 170080117 sfmF ECDH10B_0490 - fimbrial-like adhesin protein 455 36.65 -2 502403..503035 - 210 170080118 fimZ ECDH10B_0491 - DNA-binding transcriptional regulator 456 46.91 0 503370..504533 - 387 170080119 intD ECDH10B_0493 - DLP12 prophage; integrase 457 49.62 0 504653..504916 - 87 170080120 ybcC ECDH10B_0494 - DLP12 prophage; exonuclease 458 50.16 0 505388..505696 + 102 170080121 insE-3 ECDH10B_0496 - DLP12 prophage; IS3 element protein InsE 459 55.13 0 505693..506559 + 288 170080122 insF-3 ECDH10B_0497 - DLP12 prophage; IS3 element protein InsF 460 48.92 0 506617..506802 + 61 170080123 renD ECDH10B_0498 - DLP12 prophage; hypothetical protein 461 41.14 -2 506870..507202 + 110 170080124 emrE ECDH10B_0499 - DLP12 prophage; multidrug resistance protein 462 35.56 -2 507457..508983 + 508 170080125 ybcK ECDH10B_0500 - DLP12 prophage; recombinase 463 42.39 -1 509448..509999 + 183 170080126 ybcL ECDH10B_0501 - DLP12 prophage; kinase inhibitor 464 36.22 -2 510009..510806 + 265 170080127 ybcM ECDH10B_0502 - DLP12 prophage; DNA-binding transcriptional regulator 465 50.44 0 511021..511476 + 151 170080128 ybcN ECDH10B_0503 - DLP12 prophage; hypothetical protein 466 48.54 0 511476..511646 + 56 170080129 ninE ECDH10B_0504 - DLP12 prophage; hypothetical protein 467 53.26 0 511639..511929 + 96 170080130 ybcO ECDH10B_0505 - DLP12 prophage; hypothetical protein 468 53.17 0 511926..512288 + 120 170080131 rusA ECDH10B_0506 - DLP12 prophage; endonuclease RUS 469 47.52 0 512285..512425 + 46 170080132 ylcG ECDH10B_0507 - DLP12 prophage; hypothetical protein 470 42.97 -1 512511..512894 + 127 170080133 ybcQ ECDH10B_0508 - DLP12 prophage; antitermination protein 471 54.67 0 513292..514308 - 338 170080134 insH-2 ECDH10B_0510 - DLP12 prophage; IS5 transposase and trans-activator 472 47.69 0 515953..516168 + 71 170080135 essD ECDH10B_0511 - DLP12 prophage; phage lysis protein 473 47.59 0 516168..516665 + 165 170080136 ybcS ECDH10B_0512 - DLP12 prophage; lysozyme 474 51.30 0 516662..517123 + 153 170080137 rzpD ECDH10B_0513 - DLP12 prophage; murein endopeptidase 475 56.83 +1 516882..517064 + 60 170080138 rzoD ECDH10B_0514 - DLP12 prophage; lipoprotein 476 41.50 -2 517155..517448 - 97 170080139 borD ECDH10B_0515 - DLP12 prophage; lipoprotein 477 31.63 -2 517739..518149 - 136 170080140 ybcV ECDH10B_0516 - DLP12 prophage; hypothetical protein 478 39.61 -2 518435..518641 + 68 170080141 ybcW ECDH10B_0517 - DLP12 prophage; hypothetical protein 479 52.56 0 519389..519934 + 181 170080142 nohB ECDH10B_0518 - DLP12 prophage; DNA packaging protein 480 31.73 -2 522236..522985 + 249 170080143 appY ECDH10B_0522 - DLP12 prophage; DNA-binding transcriptional activator 481 43.40 -1 523235..524188 - 317 170080144 ompT ECDH10B_0523 - DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) 482 46.33 -1 524702..525463 - 253 170080145 envY ECDH10B_0524 - DNA-binding transcriptional activator of porin biosynthesis 483 52.30 0 525646..526536 - 296 170080146 ybcH ECDH10B_0525 - hypothetical protein 484 55.06 0 526537..529509 - 990 170080147 nfrA ECDH10B_0526 - bacteriophage N4 receptor, outer membrane subunit 485 52.50 0 529496..531733 - 745 170080148 nfrB ECDH10B_0527 - bacteriophage N4 receptor, inner membrane subunit 486 52.04 0 531883..533325 - 480 170080149 cusS ECDH10B_0528 - sensory histidine kinase in two-component regulatory system with CusR, senses copper ions 487 53.80 0 533315..533998 - 227 170080150 cusR ECDH10B_0529 - DNA-binding response regulator in two-component regulatory system with CusS 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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