version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4011 51.45 0 4554442..4555440 - 332 170083674 fbp ECDH10B_4427 - fructose-1,6-bisphosphatase I 4012 55.31 0 4555616..4556989 + 457 170083675 mpl ECDH10B_4428 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 4013 52.90 0 4557145..4557696 - 183 170083676 yjgA ECDH10B_4429 - hypothetical protein 4014 54.25 0 4557790..4559142 + 450 170083677 pmbA ECDH10B_4430 - peptidase required for the maturation and secretion of the antibiotic peptide MccB17 4015 50.97 0 4559731..4560195 - 154 170083678 nrdG ECDH10B_4432 - anaerobic ribonucleotide reductase activating protein 4016 53.53 0 4560353..4562491 - 712 170083679 nrdD ECDH10B_4433 - anaerobic ribonucleoside-triphosphate reductase 4017 53.08 0 4562885..4564540 - 551 170083680 treC ECDH10B_4434 - trehalose-6-P hydrolase 4018 54.36 0 4564590..4566011 - 473 170083681 treB ECDH10B_4435 - fused trehalose(maltose)-specific PTS enzyme: IIB component; IIC component 4019 53.80 0 4566130..4567077 - 315 170083682 treR ECDH10B_4436 - DNA-binding transcriptional repressor 4020 52.47 0 4567456..4570152 + 898 170083683 mgtA ECDH10B_4437 - magnesium transporter 4021 52.97 0 4570358..4570744 - 128 170083684 yjgF ECDH10B_4438 - ketoacid-binding protein 4022 48.48 0 4570817..4571278 - 153 170083685 pyrI ECDH10B_4439 - aspartate carbamoyltransferase, regulatory subunit 4023 53.74 0 4571291..4572226 - 311 170083686 pyrB ECDH10B_4440 - aspartate carbamoyltransferase, catalytic subunit 4024 50.37 0 4572230..4572364 - 44 170083687 pyrL ECDH10B_4441 - pyrBI operon leader peptide 4025 47.22 0 4572645..4573040 - 131 170083688 yjgH ECDH10B_4442 - mRNA endoribonuclease 4026 54.34 0 4573171..4573884 - 237 170083689 yjgI ECDH10B_4443 - oxidoreductase 4027 49.16 0 4573955..4574548 + 197 170083690 yjgJ ECDH10B_4444 - transcriptional regulator 4028 50.11 0 4574693..4575145 + 150 170083691 yjgK ECDH10B_4445 - hypothetical protein 4029 32.18 -2 4575268..4577082 + 604 170083692 yjgL ECDH10B_4446 - hypothetical protein 4030 52.14 0 4577138..4578142 - 334 170083693 argI ECDH10B_4447 - ornithine carbamoyltransferase 1 4031 48.92 0 4578304..4578720 + 138 170083694 rraB ECDH10B_4448 - ribonuclease E inhibitor protein 4032 51.98 0 4578865..4579368 - 167 170083695 yjgM ECDH10B_4449 - acetyltransferase 4033 37.09 -2 4579561..4580757 + 398 170083696 yjgN ECDH10B_4450 - inner membrane protein 4034 54.59 0 4580813..4583668 - 951 170083697 valS ECDH10B_4451 - valyl-tRNA synthetase 4035 54.05 0 4583668..4584111 - 147 170083698 holC ECDH10B_4452 - DNA polymerase III, chi subunit 4036 55.29 0 4584271..4585782 - 503 170083699 pepA ECDH10B_4453 - aminopeptidase A, a cyteinylglycinase 4037 54.77 0 4586049..4587149 + 366 170083700 yjgP ECDH10B_4454 - inner membrane protein 4038 54.29 0 4587149..4588231 + 360 170083701 yjgQ ECDH10B_4455 - inner membrane protein 4039 53.76 0 4588392..4589894 - 500 170083702 yjgR ECDH10B_4456 - ATPase 4040 47.05 0 4589972..4590970 - 332 170083703 idnR ECDH10B_4457 - DNA-binding transcriptional repressor, 5-gluconate-binding 4041 50.61 0 4591037..4592356 - 439 170083704 idnT ECDH10B_4458 - L-idonate and D-gluconate transporter 4042 49.41 0 4592418..4593182 - 254 170083705 idnO ECDH10B_4459 - 5-keto-D-gluconate-5-reductase 4043 47.38 0 4593206..4594237 - 343 170083706 idnD ECDH10B_4460 - L-idonate 5-dehydrogenase, NAD-binding 4044 43.44 -1 4594454..4595017 + 187 170083707 idnK ECDH10B_4461 - D-gluconate kinase, thermosensitive 4045 55.59 0 4595021..4596040 - 339 170083708 yjgB ECDH10B_4462 - Zn-dependent/NAD(P)-binding alcohol dehydrogenase 4046 45.76 -1 4596581..4597771 + 396 170083709 intB ECDH10B_4464 - KpLE2 phage-like element; integrase 4047 50.85 0 4598058..4598468 + 136 170083710 insC-6 ECDH10B_4465 - KpLE2 phage-like element; IS2 insertion element repressor InsA 4048 55.08 0 4598426..4599331 + 301 170083711 insD-6 ECDH10B_4466 - KpLE2 phage-like element; IS2 insertion element transposase InsAB' 4049 46.13 -1 4599430..4599765 + 111 170083712 yjgW ECDH10B_4467 - KpLE2 phage-like element; protein 4050 58.18 +1 4601091..4601420 + 109 170083713 yjgZ ECDH10B_4472 - KpLE2 phage-like element; protein 4051 54.18 0 4601934..4603262 - 442 170083714 insG ECDH10B_4473 - KpLE2 phage-like element; IS4 transposase 4052 36.29 -2 4603889..4605106 + 405 170083715 yjhB ECDH10B_4474 - KpLE2 phage-like element; transporter 4053 38.70 -2 4605118..4606236 + 372 170083716 yjhC ECDH10B_4475 - KpLE2 phage-like element; oxidoreductase 4054 43.07 -1 4607028..4607294 + 88 170083717 insN-2 ECDH10B_4478 - KpLE2 phage-like element; partial regulator of insertion element IS911B 4055 45.83 -1 4607297..4608448 - 383 170083718 insI-3 ECDH10B_4479 - KpLE2 phage-like element; IS30 transposase 4056 55.28 0 4608789..4609385 + 198 170083719 insO-2 ECDH10B_4481 - KpLE2 phage-like element; partial transposase of insertion element IS911B 4057 52.17 0 4609551..4609964 + 137 170083720 yjhV ECDH10B_4484 - KpLE2 phage-like element; protein 4058 54.04 0 4610521..4611288 - 255 170083721 fecE ECDH10B_4485 - KpLE2 phage-like iron-dicitrate ABC transporter ATP-binding protein 4059 59.77 +1 4611289..4612245 - 318 170083722 fecD ECDH10B_4486 - KpLE2 phage-like iron-dicitrate ABC transporter membrane protein 4060 60.66 +2 4612242..4613240 - 332 170083723 fecC ECDH10B_4487 - KpLE2 phage-like iron-dicitrate ABC transporter membrane protein 4061 57.70 +1 4613237..4614139 - 300 170083724 fecB ECDH10B_4488 - KpLE2 phage-like iron-dicitrate ABC transporter periplasmic-binding protein 4062 58.54 +1 4614184..4616508 - 774 170083725 fecA ECDH10B_4489 - KpLE2 phage-like element; ferric citrate outer membrane transporter 4063 59.01 +1 4616595..4617548 - 317 170083726 fecR ECDH10B_4490 - KpLE2 phage-like element; transmembrane signal transducer for ferric citrate transport 4064 54.60 0 4617545..4618066 - 173 170083727 fecI ECDH10B_4491 - KpLE2 phage-like element; RNA polymerase, sigma 19 factor 4065 52.90 0 4618358..4618633 + 91 170083728 insA-7 ECDH10B_4492 - KpLE2 phage-like element; IS1 repressor protein InsA 4066 50.35 0 4619169..4620155 - 328 170083729 yjhU ECDH10B_4496 - KpLE2 phage-like element; DNA-binding transcriptional regulator 4067 49.04 0 4620502..4621851 - 449 170083730 yjhF ECDH10B_4497 - KpLE2 phage-like element; transporter 4068 54.52 0 4621958..4623925 - 655 170083731 yjhG ECDH10B_4498 - KpLE2 phage-like element; dehydratase 4069 52.65 0 4623936..4624841 - 301 170083732 yjhH ECDH10B_4499 - KpLE2 phage-like element; lyase/synthase 4070 40.81 -2 4624846..4625634 - 262 170083733 yjhI ECDH10B_4500 - KpLE2 phage-like element; DNA-binding transcriptional regulator 4071 49.68 0 4625937..4626719 - 260 170083734 sgcR ECDH10B_4501 - KpLE2 phage-like element; DNA-binding transcriptional regulator 4072 55.45 0 4626736..4627368 - 210 170083735 sgcE ECDH10B_4502 - KpLE2 phage-like element; epimerase 4073 54.40 0 4627380..4627811 - 143 170083736 sgcA ECDH10B_4503 - KpLE2 phage-like element; phosphotransferase enzyme IIA component 4074 53.28 0 4627942..4628748 - 268 170083737 sgcQ ECDH10B_4504 - KpLE2 phage-like element; nucleoside triphosphatase 4075 51.75 0 4628761..4630074 - 437 170083738 sgcC ECDH10B_4505 - KpLE2 phage-like element; phosphotransferase enzyme IIC component 4076 48.39 0 4630086..4630364 - 92 170083739 sgcB ECDH10B_4506 - enzyme IIB component of PTS 4077 52.41 0 4630361..4631482 - 373 170083740 sgcX ECDH10B_4507 - KpLE2 phage-like element 4078 59.57 +1 4632268..4633014 - 248 170083741 yjhP ECDH10B_4508 - KpLE2 phage-like element; methyltransferase 4079 55.31 0 4633070..4633615 - 181 170083742 yjhQ ECDH10B_4509 - KpLE2 phage-like element; acetyltransferase 4080 49.61 0 4633627..4633884 - 85 170083743 yjhX ECDH10B_4510 - hypothetical protein 4081 48.73 0 4636445..4637425 - 326 170083744 yjhS ECDH10B_4512 - hypothetical protein 4082 44.17 -1 4637490..4638596 - 368 170083745 yjhT ECDH10B_4513 - hypothetical protein 4083 42.96 -1 4638616..4639332 - 238 170083746 yjhA ECDH10B_4514 - N-acetylnuraminic acid outer membrane channel protein 4084 50.51 0 4644180..4644674 - 164 170083747 yjjA ECDH10B_4516 - hypothetical protein 4085 50.54 0 4644723..4645460 - 245 170083748 dnaC ECDH10B_4517 - DNA biosynthesis protein 4086 57.04 +1 4645463..4646002 - 179 170083749 dnaT ECDH10B_4518 - DNA biosynthesis protein (primosomal protein I) 4087 48.01 0 4646109..4646435 - 108 170083750 yjjB ECDH10B_4519 - inner membrane protein 4088 51.62 0 4646573..4647343 - 256 170083751 yjjP ECDH10B_4520 - inner membrane protein 4089 45.04 -1 4647962..4648687 + 241 170083752 yjjQ ECDH10B_4521 - DNA-binding transcriptional regulator 4090 45.67 -1 4648699..4649322 + 207 170083753 bglJ ECDH10B_4522 - DNA-binding transcriptional activator 4091 53.11 0 4649360..4650148 - 262 170083754 fhuF ECDH10B_4523 - ferric iron reductase involved in ferric hydroximate transport 4092 48.10 0 4650289..4650525 + 78 170083755 yjjZ ECDH10B_4524 - hypothetical protein 4093 55.72 0 4651154..4652185 - 343 170083756 rsmC ECDH10B_4528 - 16S RNA m2G1207 methylase 4094 57.73 +1 4652288..4652701 + 137 170083757 holD ECDH10B_4529 - DNA polymerase III, psi subunit 4095 52.35 0 4652670..4653116 + 148 170083758 rimI ECDH10B_4530 - acetylase for 30S ribosomal subunit protein S18 4096 53.54 0 4653131..4653808 + 225 170083759 yjjG ECDH10B_4531 - hydrolase 4097 54.03 0 4653899..4655488 + 529 170083760 prfC ECDH10B_4532 - peptide chain release factor RF-3 4098 51.65 0 4655881..4656486 + 201 170083761 osmY ECDH10B_4533 - periplasmic protein 4099 51.11 0 4656595..4656774 + 59 170083762 ytjA ECDH10B_4534 - hypothetical protein 4100 53.91 0 4656896..4657969 + 357 170083763 yjjU ECDH10B_4535 - esterase 4101 55.51 0 4657966..4658745 + 259 170083764 yjjV ECDH10B_4536 - DNase 4102 56.37 +1 4659165..4660028 - 287 170083765 yjjW ECDH10B_4537 - pyruvate formate lyase activating enzyme 4103 53.13 0 4660000..4661550 - 516 170083766 yjjI ECDH10B_4538 - hypothetical protein 4104 55.38 0 4661808..4662587 + 259 170083767 deoC ECDH10B_4539 - 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked 4105 55.18 0 4662714..4664036 + 440 170083768 deoA ECDH10B_4540 - thymidine phosphorylase 4106 54.33 0 4664088..4665311 + 407 170083769 deoB ECDH10B_4541 - phosphopentomutase 4107 52.36 0 4665368..4666087 + 239 170083770 deoD ECDH10B_4542 - purine-nucleoside phosphorylase 4108 53.83 0 4666254..4667585 + 443 170083771 yjjJ ECDH10B_4543 - DNA-binding transcriptional regulator 4109 57.82 +1 4667586..4668602 - 338 170083772 lplA ECDH10B_4544 - lipoate-protein ligase A 4110 55.66 0 4668630..4669274 - 214 170083773 ytjB ECDH10B_4545 - hypothetical protein 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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