version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3979 57.14 +1 4520571..4521221 + 216 170083642 ulaD ECDH10B_4391 - 3-keto-L-gulonate 6-phosphate decarboxylase 3980 56.73 +1 4521231..4522085 + 284 170083643 ulaE ECDH10B_4392 - L-xylulose 5-phosphate 3-epimerase 3981 57.21 +1 4522085..4522771 + 228 170083644 ulaF ECDH10B_4393 - L-ribulose 5-phosphate 4-epimerase 3982 46.01 -1 4522901..4523176 - 91 170083645 yjfY ECDH10B_4394 - hypothetical protein 3983 52.53 0 4523503..4523898 + 131 170083646 rpsF ECDH10B_4395 - 30S ribosomal subunit protein S6 3984 52.63 0 4524224..4524451 + 75 170083647 rpsR ECDH10B_4397 - 30S ribosomal subunit protein S18 3985 49.78 0 4524493..4524942 + 149 170083648 rplI ECDH10B_4398 - 50S ribosomal subunit protein L9 3986 42.39 -1 4525013..4525807 - 264 170083649 yjfZ ECDH10B_4399 - hypothetical protein 3987 42.20 -1 4526154..4526480 + 108 170083650 ytfA ECDH10B_4400 - transcriptional regulator 3988 55.71 0 4526464..4527102 - 212 170083651 ytfB ECDH10B_4401 - cell envelope opacity-associated protein 3989 55.72 0 4527320..4527940 + 206 170083652 fklB ECDH10B_4402 - FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 3990 52.58 0 4528249..4529661 + 470 170083653 cycA ECDH10B_4403 - D-alanine/D-serine/glycine transporter 3991 53.09 0 4529706..4530368 - 220 170083654 ytfE ECDH10B_4404 - regulator of cell morphogenesis and cell wall metabolism 3992 55.49 0 4530476..4531450 - 324 170083655 ytfF ECDH10B_4405 - inner membrane protein 3993 54.24 0 4531549..4532409 - 286 170083656 ytfG ECDH10B_4406 - NAD(P)H:quinone oxidoreductase 3994 56.17 +1 4532498..4532878 + 126 170083657 ytfH ECDH10B_4407 - transcriptional regulator 3995 49.49 0 4533007..4534950 - 647 170083658 cpdB ECDH10B_4408 - 2':3'-cyclic-nucleotide 2'-phosphodiesterase 3996 36.10 -2 4536092..4537030 + 312 170083659 ytfI ECDH10B_4410 - hypothetical protein 3997 52.43 0 4537093..4537647 - 184 170083660 ytfJ ECDH10B_4411 - transcriptional regulator 3998 43.48 -1 4537972..4538178 + 68 170083661 ytfK ECDH10B_4412 - hypothetical protein 3999 50.74 0 4538257..4539600 - 447 170083662 ytfL ECDH10B_4413 - inner membrane protein 4000 54.46 0 4539923..4540561 - 212 170083663 msrA ECDH10B_4414 - methionine sulfoxide reductase A 4001 53.34 0 4540767..4542500 + 577 170083664 ytfM ECDH10B_4415 - outer membrane protein and surface antigen 4002 55.00 0 4542497..4546276 + 1259 170083665 ytfN ECDH10B_4416 - hypothetical protein 4003 51.46 0 4546279..4546620 + 113 170083666 ytfP ECDH10B_4417 - hypothetical protein 4004 52.22 0 4546361..4546630 - 89 170083667 yzfA ECDH10B_4418 - hypothetical protein 4005 50.40 0 4546832..4547083 + 83 170083668 chpS ECDH10B_4419 - antitoxin of the ChpB-ChpS toxin-antitoxin system 4006 53.85 0 4547077..4547427 + 116 170083669 chpB ECDH10B_4420 - toxin of the ChpB-ChpS toxin-antitoxin system 4007 51.22 0 4547507..4548037 - 176 170083670 ppa ECDH10B_4421 - inorganic pyrophosphatase 4008 49.84 0 4548347..4549303 + 318 170083671 ytfQ ECDH10B_4422 - sugar ABC transporter periplasmic-binding protein 4009 55.56 0 4549443..4550945 + 500 170083672 ytfR ECDH10B_4423 - sugar ABC transporter ATP-binding protein 4010 51.81 0 4553414..4554409 + 331 170083673 yjfF ECDH10B_4426 - sugar ABC transporter membrane protein 4011 51.45 0 4554442..4555440 - 332 170083674 fbp ECDH10B_4427 - fructose-1,6-bisphosphatase I 4012 55.31 0 4555616..4556989 + 457 170083675 mpl ECDH10B_4428 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 4013 52.90 0 4557145..4557696 - 183 170083676 yjgA ECDH10B_4429 - hypothetical protein 4014 54.25 0 4557790..4559142 + 450 170083677 pmbA ECDH10B_4430 - peptidase required for the maturation and secretion of the antibiotic peptide MccB17 4015 50.97 0 4559731..4560195 - 154 170083678 nrdG ECDH10B_4432 - anaerobic ribonucleotide reductase activating protein 4016 53.53 0 4560353..4562491 - 712 170083679 nrdD ECDH10B_4433 - anaerobic ribonucleoside-triphosphate reductase 4017 53.08 0 4562885..4564540 - 551 170083680 treC ECDH10B_4434 - trehalose-6-P hydrolase 4018 54.36 0 4564590..4566011 - 473 170083681 treB ECDH10B_4435 - fused trehalose(maltose)-specific PTS enzyme: IIB component; IIC component 4019 53.80 0 4566130..4567077 - 315 170083682 treR ECDH10B_4436 - DNA-binding transcriptional repressor 4020 52.47 0 4567456..4570152 + 898 170083683 mgtA ECDH10B_4437 - magnesium transporter 4021 52.97 0 4570358..4570744 - 128 170083684 yjgF ECDH10B_4438 - ketoacid-binding protein 4022 48.48 0 4570817..4571278 - 153 170083685 pyrI ECDH10B_4439 - aspartate carbamoyltransferase, regulatory subunit 4023 53.74 0 4571291..4572226 - 311 170083686 pyrB ECDH10B_4440 - aspartate carbamoyltransferase, catalytic subunit 4024 50.37 0 4572230..4572364 - 44 170083687 pyrL ECDH10B_4441 - pyrBI operon leader peptide 4025 47.22 0 4572645..4573040 - 131 170083688 yjgH ECDH10B_4442 - mRNA endoribonuclease 4026 54.34 0 4573171..4573884 - 237 170083689 yjgI ECDH10B_4443 - oxidoreductase 4027 49.16 0 4573955..4574548 + 197 170083690 yjgJ ECDH10B_4444 - transcriptional regulator 4028 50.11 0 4574693..4575145 + 150 170083691 yjgK ECDH10B_4445 - hypothetical protein 4029 32.18 -2 4575268..4577082 + 604 170083692 yjgL ECDH10B_4446 - hypothetical protein 4030 52.14 0 4577138..4578142 - 334 170083693 argI ECDH10B_4447 - ornithine carbamoyltransferase 1 4031 48.92 0 4578304..4578720 + 138 170083694 rraB ECDH10B_4448 - ribonuclease E inhibitor protein 4032 51.98 0 4578865..4579368 - 167 170083695 yjgM ECDH10B_4449 - acetyltransferase 4033 37.09 -2 4579561..4580757 + 398 170083696 yjgN ECDH10B_4450 - inner membrane protein 4034 54.59 0 4580813..4583668 - 951 170083697 valS ECDH10B_4451 - valyl-tRNA synthetase 4035 54.05 0 4583668..4584111 - 147 170083698 holC ECDH10B_4452 - DNA polymerase III, chi subunit 4036 55.29 0 4584271..4585782 - 503 170083699 pepA ECDH10B_4453 - aminopeptidase A, a cyteinylglycinase 4037 54.77 0 4586049..4587149 + 366 170083700 yjgP ECDH10B_4454 - inner membrane protein 4038 54.29 0 4587149..4588231 + 360 170083701 yjgQ ECDH10B_4455 - inner membrane protein 4039 53.76 0 4588392..4589894 - 500 170083702 yjgR ECDH10B_4456 - ATPase 4040 47.05 0 4589972..4590970 - 332 170083703 idnR ECDH10B_4457 - DNA-binding transcriptional repressor, 5-gluconate-binding 4041 50.61 0 4591037..4592356 - 439 170083704 idnT ECDH10B_4458 - L-idonate and D-gluconate transporter 4042 49.41 0 4592418..4593182 - 254 170083705 idnO ECDH10B_4459 - 5-keto-D-gluconate-5-reductase 4043 47.38 0 4593206..4594237 - 343 170083706 idnD ECDH10B_4460 - L-idonate 5-dehydrogenase, NAD-binding 4044 43.44 -1 4594454..4595017 + 187 170083707 idnK ECDH10B_4461 - D-gluconate kinase, thermosensitive 4045 55.59 0 4595021..4596040 - 339 170083708 yjgB ECDH10B_4462 - Zn-dependent/NAD(P)-binding alcohol dehydrogenase 4046 45.76 -1 4596581..4597771 + 396 170083709 intB ECDH10B_4464 - KpLE2 phage-like element; integrase 4047 50.85 0 4598058..4598468 + 136 170083710 insC-6 ECDH10B_4465 - KpLE2 phage-like element; IS2 insertion element repressor InsA 4048 55.08 0 4598426..4599331 + 301 170083711 insD-6 ECDH10B_4466 - KpLE2 phage-like element; IS2 insertion element transposase InsAB' 4049 46.13 -1 4599430..4599765 + 111 170083712 yjgW ECDH10B_4467 - KpLE2 phage-like element; protein 4050 58.18 +1 4601091..4601420 + 109 170083713 yjgZ ECDH10B_4472 - KpLE2 phage-like element; protein 4051 54.18 0 4601934..4603262 - 442 170083714 insG ECDH10B_4473 - KpLE2 phage-like element; IS4 transposase 4052 36.29 -2 4603889..4605106 + 405 170083715 yjhB ECDH10B_4474 - KpLE2 phage-like element; transporter 4053 38.70 -2 4605118..4606236 + 372 170083716 yjhC ECDH10B_4475 - KpLE2 phage-like element; oxidoreductase 4054 43.07 -1 4607028..4607294 + 88 170083717 insN-2 ECDH10B_4478 - KpLE2 phage-like element; partial regulator of insertion element IS911B 4055 45.83 -1 4607297..4608448 - 383 170083718 insI-3 ECDH10B_4479 - KpLE2 phage-like element; IS30 transposase 4056 55.28 0 4608789..4609385 + 198 170083719 insO-2 ECDH10B_4481 - KpLE2 phage-like element; partial transposase of insertion element IS911B 4057 52.17 0 4609551..4609964 + 137 170083720 yjhV ECDH10B_4484 - KpLE2 phage-like element; protein 4058 54.04 0 4610521..4611288 - 255 170083721 fecE ECDH10B_4485 - KpLE2 phage-like iron-dicitrate ABC transporter ATP-binding protein 4059 59.77 +1 4611289..4612245 - 318 170083722 fecD ECDH10B_4486 - KpLE2 phage-like iron-dicitrate ABC transporter membrane protein 4060 60.66 +2 4612242..4613240 - 332 170083723 fecC ECDH10B_4487 - KpLE2 phage-like iron-dicitrate ABC transporter membrane protein 4061 57.70 +1 4613237..4614139 - 300 170083724 fecB ECDH10B_4488 - KpLE2 phage-like iron-dicitrate ABC transporter periplasmic-binding protein 4062 58.54 +1 4614184..4616508 - 774 170083725 fecA ECDH10B_4489 - KpLE2 phage-like element; ferric citrate outer membrane transporter 4063 59.01 +1 4616595..4617548 - 317 170083726 fecR ECDH10B_4490 - KpLE2 phage-like element; transmembrane signal transducer for ferric citrate transport 4064 54.60 0 4617545..4618066 - 173 170083727 fecI ECDH10B_4491 - KpLE2 phage-like element; RNA polymerase, sigma 19 factor 4065 52.90 0 4618358..4618633 + 91 170083728 insA-7 ECDH10B_4492 - KpLE2 phage-like element; IS1 repressor protein InsA 4066 50.35 0 4619169..4620155 - 328 170083729 yjhU ECDH10B_4496 - KpLE2 phage-like element; DNA-binding transcriptional regulator 4067 49.04 0 4620502..4621851 - 449 170083730 yjhF ECDH10B_4497 - KpLE2 phage-like element; transporter 4068 54.52 0 4621958..4623925 - 655 170083731 yjhG ECDH10B_4498 - KpLE2 phage-like element; dehydratase 4069 52.65 0 4623936..4624841 - 301 170083732 yjhH ECDH10B_4499 - KpLE2 phage-like element; lyase/synthase 4070 40.81 -2 4624846..4625634 - 262 170083733 yjhI ECDH10B_4500 - KpLE2 phage-like element; DNA-binding transcriptional regulator 4071 49.68 0 4625937..4626719 - 260 170083734 sgcR ECDH10B_4501 - KpLE2 phage-like element; DNA-binding transcriptional regulator 4072 55.45 0 4626736..4627368 - 210 170083735 sgcE ECDH10B_4502 - KpLE2 phage-like element; epimerase 4073 54.40 0 4627380..4627811 - 143 170083736 sgcA ECDH10B_4503 - KpLE2 phage-like element; phosphotransferase enzyme IIA component 4074 53.28 0 4627942..4628748 - 268 170083737 sgcQ ECDH10B_4504 - KpLE2 phage-like element; nucleoside triphosphatase 4075 51.75 0 4628761..4630074 - 437 170083738 sgcC ECDH10B_4505 - KpLE2 phage-like element; phosphotransferase enzyme IIC component 4076 48.39 0 4630086..4630364 - 92 170083739 sgcB ECDH10B_4506 - enzyme IIB component of PTS 4077 52.41 0 4630361..4631482 - 373 170083740 sgcX ECDH10B_4507 - KpLE2 phage-like element 4078 59.57 +1 4632268..4633014 - 248 170083741 yjhP ECDH10B_4508 - KpLE2 phage-like element; methyltransferase 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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