version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3671 41.65 -1 4141142..4142572 + 476 170083334 yihF ECDH10B_4050 - hypothetical protein 3672 45.12 -1 4142613..4143545 - 310 170083335 yihG ECDH10B_4051 - endonuclease 3673 51.96 0 4143909..4146695 + 928 170083336 polA ECDH10B_4052 - DNA polymerase I 3674 52.93 0 4147076..4147672 - 198 170083337 yihA ECDH10B_4054 - GTP-binding protein 3675 52.35 0 4148290..4148799 + 169 170083338 yihI ECDH10B_4056 - hypothetical protein 3676 53.13 0 4148988..4150361 + 457 170083339 hemN ECDH10B_4057 - coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent 3677 56.95 +1 4150812..4152221 - 469 170083340 glnG ECDH10B_4058 - fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator; sigma54 interaction protein 3678 55.24 0 4152233..4153282 - 349 170083341 glnL ECDH10B_4059 - sensory histidine kinase in two-component regulatory system with GlnG 3679 52.91 0 4153568..4154977 - 469 170083342 glnA ECDH10B_4060 - glutamine synthetase 3680 53.45 0 4155350..4157173 + 607 170083343 bipA ECDH10B_4061 - GTP-binding protein 3681 49.09 0 4157390..4158100 + 236 170083344 yihL ECDH10B_4062 - DNA-binding transcriptional regulator 3682 43.93 -1 4158108..4159088 + 326 170083345 yihM ECDH10B_4063 - sugar phosphate isomerase 3683 45.02 -1 4159190..4160455 + 421 170083346 yihN ECDH10B_4064 - transporter 3684 40.84 -2 4160546..4161238 - 230 170083347 ompL ECDH10B_4065 - outer membrane porin L 3685 45.01 -1 4161306..4162709 - 467 170083348 yihO ECDH10B_4066 - predited transporter 3686 52.38 0 4162752..4164158 - 468 170083349 yihP ECDH10B_4067 - transporter 3687 53.51 0 4164183..4166219 - 678 170083350 yihQ ECDH10B_4068 - alpha-glucosidase 3688 48.22 0 4167195..4168121 - 308 170083351 yihR ECDH10B_4069 - aldose-1-epimerase 3689 53.30 0 4168235..4169476 - 413 170083352 yihS ECDH10B_4070 - glucosamine isomerase 3690 53.81 0 4169493..4170371 - 292 170083353 yihT ECDH10B_4071 - aldolase 3691 55.30 0 4170395..4171291 - 298 170083354 yihU ECDH10B_4072 - oxidoreductase 3692 55.63 0 4171459..4172355 + 298 170083355 yihV ECDH10B_4073 - sugar kinase 3693 52.42 0 4172389..4173174 + 261 170083356 yihW ECDH10B_4074 - DNA-binding transcriptional regulator 3694 50.50 0 4173273..4173872 + 199 170083357 yihX ECDH10B_4075 - hydrolase 3695 50.86 0 4173866..4174738 + 290 170083358 rbn ECDH10B_4076 - inner membrane protein 3696 55.02 0 4174735..4175172 + 145 170083359 dtd ECDH10B_4077 - D-Tyr-tRNA(Tyr) deacylase 3697 55.05 0 4175169..4176158 + 329 170083360 yiiD ECDH10B_4078 - acetyltransferase 3698 47.03 0 4177011..4177229 + 72 170083361 yiiE ECDH10B_4079 - transcriptional regulator 3699 46.12 -1 4177471..4177689 + 72 170083362 yiiF ECDH10B_4080 - hypothetical protein 3700 54.62 0 4178019..4178948 - 309 170083363 fdhE ECDH10B_4081 - formate dehydrogenase formation protein 3701 52.52 0 4178945..4179580 - 211 170083364 fdoI ECDH10B_4082 - formate dehydrogenase-O, cytochrome b556 subunit 3702 55.48 0 4179577..4180479 - 300 170083365 fdoH ECDH10B_4083 - formate dehydrogenase-O, Fe-S subunit 3703 55.13 0 4180492..4183542 - 1016 170083366 fdoG ECDH10B_4084 - formate dehydrogenase-O, large subunit 3704 53.12 0 4183736..4184569 + 277 170083367 fdhD ECDH10B_4085 - formate dehydrogenase formation protein 3705 45.64 -1 4184722..4185777 + 351 170083368 yiiG ECDH10B_4086 - hypothetical protein 3706 50.03 0 4185827..4187575 - 582 170083369 frvR ECDH10B_4087 - regulator 3707 52.57 0 4187575..4188645 - 356 170083370 frvX ECDH10B_4088 - endo-1,4-beta-glucanase 3708 55.92 +1 4188635..4190086 - 483 170083371 frvB ECDH10B_4089 - fused PTS enzymes: IIB component; IIC component 3709 50.79 0 4190844..4191158 - 104 170083372 yiiL ECDH10B_4091 - L-rhamnose mutarotase 3710 55.76 0 4191168..4191992 - 274 170083373 rhaD ECDH10B_4092 - rhamnulose-1-phosphate aldolase 3711 56.11 +1 4192443..4193702 - 419 170083374 rhaA ECDH10B_4093 - L-rhamnose isomerase 3712 54.76 0 4193699..4195168 - 489 170083375 rhaB ECDH10B_4094 - rhamnulokinase 3713 51.85 0 4195456..4196292 + 278 170083376 rhaS ECDH10B_4095 - DNA-binding transcriptional activator, L-rhamnose-binding 3714 49.73 0 4196276..4197214 + 312 170083377 rhaR ECDH10B_4096 - DNA-binding transcriptional activator, L-rhamnose-binding 3715 51.69 0 4197211..4198245 - 344 170083378 rhaT ECDH10B_4097 - L-rhamnose:proton symporter 3716 53.30 0 4198530..4199150 + 206 170083379 sodA ECDH10B_4098 - superoxide dismutase, Mn 3717 52.74 0 4199410..4200393 + 327 170083380 kdgT ECDH10B_4099 - 2-keto-3-deoxy-D-gluconate transporter 3718 53.04 0 4200542..4201216 + 224 170083381 yiiM ECDH10B_4100 - hypothetical protein 3719 54.59 0 4201322..4202695 - 457 170083382 cpxA ECDH10B_4101 - sensory histidine kinase in two-component regulatory system with CpxR 3720 51.36 0 4202692..4203390 - 232 170083383 cpxR ECDH10B_4102 - DNA-binding response regulator in two-component regulatory system with CpxA 3721 50.10 0 4203540..4204040 + 166 170083384 cpxP ECDH10B_4103 - periplasmic protein combats stress 3722 52.16 0 4204189..4205091 + 300 170083385 fieF ECDH10B_4104 - zinc transporter 3723 53.48 0 4205272..4206234 + 320 170083386 pfkA ECDH10B_4105 - 6-phosphofructokinase I 3724 50.61 0 4206554..4207543 + 329 170083387 sbp ECDH10B_4106 - sulfate ABC transporter periplasmic substrate-binding protein 3725 48.68 0 4207650..4208405 + 251 170083388 cdh ECDH10B_4107 - CDP-diacylglycerol phosphotidylhydrolase 3726 52.60 0 4208460..4209227 - 255 170083389 tpiA ECDH10B_4108 - triosephosphate isomerase 3727 49.17 0 4209335..4209934 - 199 170083390 yiiQ ECDH10B_4109 - hypothetical protein 3728 49.43 0 4210035..4210475 + 146 170083391 yiiR ECDH10B_4110 - inner membrane protein 3729 46.33 -1 4210687..4210986 + 99 170083392 yiiS ECDH10B_4111 - hypothetical protein 3730 43.12 -1 4211013..4211441 + 142 170083393 yiiT ECDH10B_4112 - stress-induced protein 3731 53.55 0 4211446..4212192 - 248 170083394 fpr ECDH10B_4113 - ferredoxin-NADP reductase 3732 56.78 +1 4212289..4213299 - 336 170083395 glpX ECDH10B_4114 - fructose 1,6-bisphosphatase II 3733 54.08 0 4213434..4214942 - 502 170083396 glpK ECDH10B_4115 - glycerol kinase 3734 50.95 0 4214965..4215810 - 281 170083397 glpF ECDH10B_4116 - glycerol facilitator 3735 48.37 0 4216235..4216480 + 81 170083398 yiiU ECDH10B_4117 - hypothetical protein 3736 52.26 0 4216565..4217050 - 161 170083399 rraA ECDH10B_4118 - ribonuclease E (RNase E) inhibitor protein 3737 53.40 0 4217143..4218069 - 308 170083400 menA ECDH10B_4119 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3738 52.63 0 4218136..4219467 - 443 170083401 hslU ECDH10B_4120 - molecular chaperone and ATPase component of HslUV protease 3739 52.73 0 4219477..4220007 - 176 170083402 hslV ECDH10B_4121 - peptidase component of the HslUV protease 3740 57.40 +1 4220100..4221059 - 319 170083403 ftsN ECDH10B_4122 - essential cell division protein 3741 52.05 0 4221151..4222176 - 341 170083404 cytR ECDH10B_4123 - DNA-binding transcriptional dual regulator 3742 57.48 +1 4222332..4224530 - 732 170083405 priA ECDH10B_4124 - primosome factor n' (replication factor Y) 3743 49.30 0 4224733..4224945 + 70 170083406 rpmE ECDH10B_4125 - 50S ribosomal subunit protein L31 3744 52.38 0 4225006..4225614 - 202 170083407 yiiX ECDH10B_4126 - peptidoglycan peptidase 3745 51.89 0 4225798..4226115 - 105 170083408 metJ ECDH10B_4127 - DNA-binding transcriptional repressor, S-adenosylmethionine-binding 3746 54.95 0 4226392..4227552 + 386 170083409 metB ECDH10B_4128 - cystathionine gamma-synthase, PLP-dependent 3747 58.32 +1 4227555..4229987 + 810 170083410 metL ECDH10B_4129 - fused aspartokinase II; homoserine dehydrogenase II 3748 51.85 0 4230336..4231226 + 296 170083411 metF ECDH10B_4130 - 5,10-methylenetetrahydrofolate reductase 3749 55.75 0 4231555..4233735 + 726 170083412 katG ECDH10B_4131 - catalase/hydroperoxidase HPI(I) 3750 54.08 0 4233828..4234733 + 301 170083413 yijE ECDH10B_4132 - permease 3751 52.59 0 4234760..4235377 - 205 170083414 yijF ECDH10B_4133 - hypothetical protein 3752 54.71 0 4235652..4236755 - 367 170083415 gldA ECDH10B_4134 - glycerol dehydrogenase, NAD 3753 53.39 0 4236766..4237428 - 220 170083416 fsaB ECDH10B_4135 - fructose-6-phosphate aldolase 2 3754 55.36 0 4237440..4239941 - 833 170083417 ptsA ECDH10B_4136 - fused PTS enzymes: Hpr component; enzyme I component; enzyme IIA component 3755 54.17 0 4240250..4241329 + 359 170083418 frwC ECDH10B_4137 - enzyme IIC component of PTS 3756 49.22 0 4241344..4241664 + 106 170083419 frwB ECDH10B_4138 - enzyme IIB component of PTS 3757 53.13 0 4241715..4244012 + 765 170083420 pflD ECDH10B_4139 - formate acetyltransferase 2 (pyruvate formate lyase II) 3758 54.95 0 4243978..4244856 + 292 170083421 pflC ECDH10B_4140 - pyruvate formate lyase II activase 3759 56.14 +1 4244858..4245199 + 113 170083422 frwD ECDH10B_4141 - enzyme IIB component of PTS 3760 53.05 0 4245186..4246037 - 283 170083423 yijO ECDH10B_4142 - DNA-binding transcriptional regulator 3761 50.00 0 4246252..4247985 - 577 170083424 yijP ECDH10B_4143 - inner membrane protein 3762 55.66 0 4248167..4250818 - 883 170083425 ppc ECDH10B_4144 - phosphoenolpyruvate carboxylase 3763 51.74 0 4251416..4252567 - 383 170083426 argE ECDH10B_4145 - acetylornithine deacetylase 3764 53.53 0 4252721..4253725 + 334 170083427 argC ECDH10B_4146 - N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding 3765 55.56 0 4253736..4254509 + 257 170083428 argB ECDH10B_4147 - acetylglutamate kinase 3766 56.48 +1 4254570..4255943 + 457 170083429 argH ECDH10B_4148 - argininosuccinate lyase 3767 55.45 0 4256210..4257127 + 305 170083430 oxyR ECDH10B_4150 - DNA-binding transcriptional dual regulator 3768 51.82 0 4257110..4258510 - 466 170083431 sthA ECDH10B_4151 - soluble pyridine nucleotide transhydrogenase 3769 53.40 0 4258844..4259491 + 215 170083432 fabR ECDH10B_4152 - DNA-binding transcriptional repressor 3770 49.17 0 4259491..4259850 + 119 170083433 yijD ECDH10B_4153 - inner membrane protein 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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