version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3613 55.10 0 4070551..4071432 + 293 170083276 rffH ECDH10B_3978 - glucose-1-phosphate thymidylyltransferase 3614 55.56 0 4071410..4072084 + 224 170083277 rffC ECDH10B_3979 - dTDP-fucosamine acetyltransferase 3615 54.38 0 4072089..4073219 + 376 170083278 rffA ECDH10B_3980 - dTDP-4-keto-6-deoxy-D-glucose aminotransferase 3616 53.64 0 4073221..4074471 + 416 170083279 wzxE ECDH10B_3981 - lipid III translocase 3617 52.87 0 4074468..4075547 + 359 170083280 rffT ECDH10B_3982 - 4-alpha-L-fucosyltransferase 3618 52.40 0 4075544..4076896 + 450 170083281 wzyE ECDH10B_3983 - entero common antigen (ECA) polysaccharide chain polymerase 3619 53.17 0 4076899..4077639 + 246 170083282 rffM ECDH10B_3984 - UDP-N-acetyl-D-mannosaminuronic acid (ManNAcA) transferase 3620 53.46 0 4077830..4079215 + 461 170083283 yifK ECDH10B_3985 - transporter 3621 52.67 0 4079901..4081136 + 411 170083284 aslB ECDH10B_3990 - regulator of arylsulfatase activity 3622 53.20 0 4081295..4082950 - 551 170083285 aslA ECDH10B_3991 - acrylsulfatase-like enzyme 3623 54.97 0 4083629..4084825 - 398 170083286 hemY ECDH10B_3993 - protoheme IX synthesis protein 3624 52.90 0 4086031..4086771 - 246 170083287 hemD ECDH10B_3995 - uroporphyrinogen III synthase 3625 56.16 +1 4086768..4087709 - 313 170083288 hemC ECDH10B_3996 - hydroxymethylbilane synthase 3626 53.89 0 4090682..4091002 - 106 170083289 cyaY ECDH10B_3998 - frataxin, iron-binding and oxidizing protein 3627 49.79 0 4090793..4091278 + 161 170083290 yzcX ECDH10B_3999 - hypothetical protein 3628 52.45 0 4091465..4091668 + 67 170083291 yifL ECDH10B_4000 - lipoprotein 3629 55.15 0 4091705..4092529 + 274 170083292 dapF ECDH10B_4001 - diaminopimelate epimerase 3630 53.96 0 4093230..4094126 + 298 170083293 xerC ECDH10B_4003 - site-specific tyrosine recombinase 3631 55.79 0 4094126..4094842 + 238 170083294 yigB ECDH10B_4004 - hydrolase 3632 57.70 +1 4094926..4097088 + 720 170083295 uvrD ECDH10B_4005 - DNA-dependent ATPase I and helicase II 3633 47.84 0 4097235..4097999 - 254 170083296 yigE ECDH10B_4006 - hypothetical protein 3634 52.68 0 4098369..4099319 + 316 170083297 corA ECDH10B_4007 - magnesium/nickel/cobalt transporter 3635 34.91 -2 4099362..4099742 - 126 170083298 yigF ECDH10B_4008 - inner membrane protein 3636 32.81 -2 4099756..4100136 - 126 170083299 yigG ECDH10B_4009 - inner membrane protein 3637 50.62 0 4100231..4101121 - 296 170083300 rarD ECDH10B_4010 - chloramphenical resistance permease 3638 53.21 0 4101173..4101640 - 155 170083301 yigI ECDH10B_4011 - hypothetical protein 3639 51.26 0 4101805..4102674 + 289 170083302 pldA ECDH10B_4012 - outer membrane phospholipase A 3640 55.14 0 4102807..4104636 + 609 170083303 recQ ECDH10B_4013 - ATP-dependent DNA helicase 3641 52.50 0 4104700..4105320 + 206 170083304 rhtC ECDH10B_4014 - threonine efflux system 3642 52.17 0 4105382..4106002 - 206 170083305 rhtB ECDH10B_4015 - neutral amino-acid efflux system 3643 53.76 0 4106113..4107135 + 340 170083306 pldB ECDH10B_4016 - lysophospholipase L(2) 3644 51.56 0 4107143..4107943 + 266 170083307 yigL ECDH10B_4017 - hydrolase 3645 56.29 +1 4108806..4109759 - 317 170083308 metR ECDH10B_4019 - DNA-binding transcriptional activator, homocysteine-binding 3646 56.23 +1 4109996..4112257 + 753 170083309 metE ECDH10B_4020 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase 3647 54.53 0 4112297..4113112 - 271 170083310 ysgA ECDH10B_4021 - hydrolase 3648 54.07 0 4113374..4114135 + 253 170083311 udp ECDH10B_4022 - uridine phosphorylase 3649 53.08 0 4114276..4115703 + 475 170083312 rmuC ECDH10B_4023 - recombination limiting protein 3650 52.12 0 4115798..4116553 + 251 170083313 ubiE ECDH10B_4024 - bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase 3651 55.78 0 4116567..4117172 + 201 170083314 yigP ECDH10B_4025 - hypothetical protein 3652 49.97 0 4117169..4118809 + 546 170083315 ubiB ECDH10B_4026 - 2-octaprenylphenol hydroxylase 3653 45.56 -1 4118888..4119157 + 89 170083316 tatA ECDH10B_4027 - TatABCE protein translocation system subunit 3654 55.43 0 4119161..4119676 + 171 170083317 tatB ECDH10B_4028 - TatABCE protein translocation system subunit 3655 51.61 0 4119679..4120455 + 258 170083318 tatC ECDH10B_4029 - TatABCE protein translocation system subunit 3656 54.28 0 4120497..4121279 + 260 170083319 tatD ECDH10B_4030 - Mg-dependent DNase 3657 49.69 0 4121276..4121764 - 162 170083320 rfaH ECDH10B_4031 - DNA-binding transcriptional antiterminator 3658 53.82 0 4121931..4123424 + 497 170083321 ubiD ECDH10B_4032 - 3-octaprenyl-4-hydroxybenzoate decarboxylase 3659 52.85 0 4123470..4124171 + 233 170083322 fre ECDH10B_4033 - flavin reductase 3660 57.73 +1 4124552..4125715 - 387 170083323 fadA ECDH10B_4034 - 3-ketoacyl-CoA thiolase (thiolase I) 3661 55.21 0 4125725..4127914 - 729 170083324 fadB ECDH10B_4035 - fused 3-hydroxybutyryl-CoA epimerase and delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase and enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase 3662 53.68 0 4128104..4129435 + 443 170083325 pepQ ECDH10B_4036 - proline dipeptidase 3663 55.61 0 4129435..4130049 + 204 170083326 yigZ ECDH10B_4037 - elongation factor 3664 53.10 0 4130088..4131539 + 483 170083327 trkH ECDH10B_4038 - potassium transporter 3665 51.83 0 4131551..4132096 + 181 170083328 hemG ECDH10B_4039 - protoporphyrin oxidase, flavoprotein 3666 48.73 0 4137849..4138361 - 170 170083329 mobB ECDH10B_4045 - molybdopterin-guanine dinucleotide biosynthesis protein B 3667 50.09 0 4138358..4138942 - 194 170083330 mobA ECDH10B_4046 - molybdopterin-guanine dinucleotide synthase 3668 46.30 -1 4139012..4139281 + 89 170083331 yihD ECDH10B_4047 - hypothetical protein 3669 48.63 0 4139358..4140344 + 328 170083332 yihE ECDH10B_4048 - kinase 3670 48.01 0 4140361..4140987 + 208 170083333 dsbA ECDH10B_4049 - periplasmic protein disulfide isomerase I 3671 41.65 -1 4141142..4142572 + 476 170083334 yihF ECDH10B_4050 - hypothetical protein 3672 45.12 -1 4142613..4143545 - 310 170083335 yihG ECDH10B_4051 - endonuclease 3673 51.96 0 4143909..4146695 + 928 170083336 polA ECDH10B_4052 - DNA polymerase I 3674 52.93 0 4147076..4147672 - 198 170083337 yihA ECDH10B_4054 - GTP-binding protein 3675 52.35 0 4148290..4148799 + 169 170083338 yihI ECDH10B_4056 - hypothetical protein 3676 53.13 0 4148988..4150361 + 457 170083339 hemN ECDH10B_4057 - coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent 3677 56.95 +1 4150812..4152221 - 469 170083340 glnG ECDH10B_4058 - fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator; sigma54 interaction protein 3678 55.24 0 4152233..4153282 - 349 170083341 glnL ECDH10B_4059 - sensory histidine kinase in two-component regulatory system with GlnG 3679 52.91 0 4153568..4154977 - 469 170083342 glnA ECDH10B_4060 - glutamine synthetase 3680 53.45 0 4155350..4157173 + 607 170083343 bipA ECDH10B_4061 - GTP-binding protein 3681 49.09 0 4157390..4158100 + 236 170083344 yihL ECDH10B_4062 - DNA-binding transcriptional regulator 3682 43.93 -1 4158108..4159088 + 326 170083345 yihM ECDH10B_4063 - sugar phosphate isomerase 3683 45.02 -1 4159190..4160455 + 421 170083346 yihN ECDH10B_4064 - transporter 3684 40.84 -2 4160546..4161238 - 230 170083347 ompL ECDH10B_4065 - outer membrane porin L 3685 45.01 -1 4161306..4162709 - 467 170083348 yihO ECDH10B_4066 - predited transporter 3686 52.38 0 4162752..4164158 - 468 170083349 yihP ECDH10B_4067 - transporter 3687 53.51 0 4164183..4166219 - 678 170083350 yihQ ECDH10B_4068 - alpha-glucosidase 3688 48.22 0 4167195..4168121 - 308 170083351 yihR ECDH10B_4069 - aldose-1-epimerase 3689 53.30 0 4168235..4169476 - 413 170083352 yihS ECDH10B_4070 - glucosamine isomerase 3690 53.81 0 4169493..4170371 - 292 170083353 yihT ECDH10B_4071 - aldolase 3691 55.30 0 4170395..4171291 - 298 170083354 yihU ECDH10B_4072 - oxidoreductase 3692 55.63 0 4171459..4172355 + 298 170083355 yihV ECDH10B_4073 - sugar kinase 3693 52.42 0 4172389..4173174 + 261 170083356 yihW ECDH10B_4074 - DNA-binding transcriptional regulator 3694 50.50 0 4173273..4173872 + 199 170083357 yihX ECDH10B_4075 - hydrolase 3695 50.86 0 4173866..4174738 + 290 170083358 rbn ECDH10B_4076 - inner membrane protein 3696 55.02 0 4174735..4175172 + 145 170083359 dtd ECDH10B_4077 - D-Tyr-tRNA(Tyr) deacylase 3697 55.05 0 4175169..4176158 + 329 170083360 yiiD ECDH10B_4078 - acetyltransferase 3698 47.03 0 4177011..4177229 + 72 170083361 yiiE ECDH10B_4079 - transcriptional regulator 3699 46.12 -1 4177471..4177689 + 72 170083362 yiiF ECDH10B_4080 - hypothetical protein 3700 54.62 0 4178019..4178948 - 309 170083363 fdhE ECDH10B_4081 - formate dehydrogenase formation protein 3701 52.52 0 4178945..4179580 - 211 170083364 fdoI ECDH10B_4082 - formate dehydrogenase-O, cytochrome b556 subunit 3702 55.48 0 4179577..4180479 - 300 170083365 fdoH ECDH10B_4083 - formate dehydrogenase-O, Fe-S subunit 3703 55.13 0 4180492..4183542 - 1016 170083366 fdoG ECDH10B_4084 - formate dehydrogenase-O, large subunit 3704 53.12 0 4183736..4184569 + 277 170083367 fdhD ECDH10B_4085 - formate dehydrogenase formation protein 3705 45.64 -1 4184722..4185777 + 351 170083368 yiiG ECDH10B_4086 - hypothetical protein 3706 50.03 0 4185827..4187575 - 582 170083369 frvR ECDH10B_4087 - regulator 3707 52.57 0 4187575..4188645 - 356 170083370 frvX ECDH10B_4088 - endo-1,4-beta-glucanase 3708 55.92 +1 4188635..4190086 - 483 170083371 frvB ECDH10B_4089 - fused PTS enzymes: IIB component; IIC component 3709 50.79 0 4190844..4191158 - 104 170083372 yiiL ECDH10B_4091 - L-rhamnose mutarotase 3710 55.76 0 4191168..4191992 - 274 170083373 rhaD ECDH10B_4092 - rhamnulose-1-phosphate aldolase 3711 56.11 +1 4192443..4193702 - 419 170083374 rhaA ECDH10B_4093 - L-rhamnose isomerase 3712 54.76 0 4193699..4195168 - 489 170083375 rhaB ECDH10B_4094 - rhamnulokinase 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0