version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3572 53.37 0 4013923..4015464 - 513 170083235 atpA ECDH10B_3921 - F1 sector of membrane-bound ATP synthase, alpha subunit 3573 51.87 0 4015477..4016010 - 177 170083236 atpH ECDH10B_3922 - F1 sector of membrane-bound ATP synthase, delta subunit 3574 52.87 0 4016025..4016495 - 156 170083237 atpF ECDH10B_3923 - F0 sector of membrane-bound ATP synthase, subunit b 3575 54.17 0 4016557..4016796 - 79 170083238 atpE ECDH10B_3924 - F0 sector of membrane-bound ATP synthase, subunit c 3576 50.25 0 4016843..4017658 - 271 170083239 atpB ECDH10B_3925 - F0 sector of membrane-bound ATP synthase, subunit a 3577 52.23 0 4017667..4018047 - 126 170083240 atpI ECDH10B_3926 - ATP synthase, membrane-bound accesory subunit 3578 48.72 0 4018664..4019287 - 207 170083241 gidB ECDH10B_3927 - methyltransferase, SAM-dependent methyltransferase, glucose-inhibited cell-division protein 3579 54.39 0 4019351..4021240 - 629 170083242 gidA ECDH10B_3928 - glucose-inhibited cell-division protein 3580 50.00 0 4021619..4022062 - 147 170083243 mioC ECDH10B_3930 - FMN-binding protein MioC 3581 49.46 0 4022152..4022610 - 152 170083244 asnC ECDH10B_3931 - DNA-binding transcriptional dual regulator 3582 56.50 +1 4022762..4023754 + 330 170083245 asnA ECDH10B_3932 - asparagine synthetase A 3583 52.75 0 4023759..4025210 - 483 170083246 viaA ECDH10B_3933 - von Willebrand factor type A domain-containing protein 3584 51.42 0 4026923..4028791 + 622 170083247 trkD ECDH10B_3935 - potassium transporter 3585 47.62 0 4028958..4029377 + 139 170083248 rbsD ECDH10B_3936 - cytoplasmic sugar-binding protein 3586 51.20 0 4029385..4030890 + 501 170083249 rbsA ECDH10B_3937 - sugar ABC transporter ATP-binding protein 3587 53.42 0 4030895..4031860 + 321 170083250 rbsC ECDH10B_3938 - sugar ABC transporter membrane protein 3588 52.86 0 4031885..4032775 + 296 170083251 rbsB ECDH10B_3939 - sugar ABC transporter periplasmic-binding protein 3589 51.94 0 4032901..4033830 + 309 170083252 rbsK ECDH10B_3940 - ribokinase 3590 49.09 0 4036128..4037555 - 475 170083253 hsrA ECDH10B_3943 - multidrug or homocysteine efflux system 3591 49.35 0 4037578..4038270 - 230 170083254 yieP ECDH10B_3944 - transcriptional regulator 3592 48.45 0 4044071..4044910 - 279 170083255 hdfR ECDH10B_3951 - DNA-binding transcriptional regulator 3593 48.08 0 4045029..4045367 + 112 170083256 yifE ECDH10B_3952 - hypothetical protein 3594 50.81 0 4045392..4046942 - 516 170083257 yifB ECDH10B_3953 - transcriptional regulator 3595 53.54 0 4047265..4047363 + 32 170083258 ilvL ECDH10B_3954 - ilvG operon leader peptide 3596 49.24 0 4049144..4049407 + 87 170083259 ilvM ECDH10B_3958 - acetolactate synthase II, small subunit 3597 54.95 0 4049427..4050356 + 309 170083260 ilvE ECDH10B_3959 - branched-chain amino-acid aminotransferase 3598 58.77 +1 4052274..4053818 + 514 170083261 ilvA ECDH10B_3961 - threonine deaminase 3599 57.61 +1 4053870..4054763 - 297 170083262 ilvY ECDH10B_3962 - DNA-binding transcriptional dual regulator 3600 53.79 0 4054913..4056388 + 491 170083263 ilvC ECDH10B_3963 - ketol-acid reductoisomerase, NAD(P)-binding 3601 51.77 0 4056475..4056756 - 93 170083264 ppiC ECDH10B_3964 - peptidyl-prolyl cis-trans isomerase C (rotamase C) 3602 53.46 0 4057620..4059641 + 673 170083265 rep ECDH10B_3967 - DNA helicase and single-stranded DNA-dependent ATPase 3603 53.67 0 4059688..4061172 - 494 170083266 gpp ECDH10B_3968 - guanosine pentaphosphatase/exopolyphosphatase 3604 52.53 0 4061308..4062573 - 421 170083267 rhlB ECDH10B_3969 - ATP-dependent RNA helicase 3605 50.91 0 4062704..4063033 + 109 170083268 trxA ECDH10B_3970 - thioredoxin 1 3606 49.02 0 4063174..4063275 + 33 170083269 rhoL ECDH10B_3971 - Rho operon leader peptide 3607 50.32 0 4063360..4064619 + 419 170083270 rho ECDH10B_3972 - transcription termination factor 3608 49.46 0 4064859..4065962 + 367 170083271 rfe ECDH10B_3973 - undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase 3609 52.72 0 4065974..4067020 + 348 170083272 wzzE ECDH10B_3974 - entero common antigen (ECA) polysaccharide chain length modulator 3610 52.61 0 4067076..4068206 + 376 170083273 rffE ECDH10B_3975 - UDP-N-acetylglucosamine 2-epimerase 3611 53.76 0 4068203..4069465 + 420 170083274 rffD ECDH10B_3976 - UDP-N-acetyl-D-mannosamine dehydrogenase 3612 53.75 0 4069465..4070532 + 355 170083275 rffG ECDH10B_3977 - dTDP-D-glucose 4,6-dehydratase 3613 55.10 0 4070551..4071432 + 293 170083276 rffH ECDH10B_3978 - glucose-1-phosphate thymidylyltransferase 3614 55.56 0 4071410..4072084 + 224 170083277 rffC ECDH10B_3979 - dTDP-fucosamine acetyltransferase 3615 54.38 0 4072089..4073219 + 376 170083278 rffA ECDH10B_3980 - dTDP-4-keto-6-deoxy-D-glucose aminotransferase 3616 53.64 0 4073221..4074471 + 416 170083279 wzxE ECDH10B_3981 - lipid III translocase 3617 52.87 0 4074468..4075547 + 359 170083280 rffT ECDH10B_3982 - 4-alpha-L-fucosyltransferase 3618 52.40 0 4075544..4076896 + 450 170083281 wzyE ECDH10B_3983 - entero common antigen (ECA) polysaccharide chain polymerase 3619 53.17 0 4076899..4077639 + 246 170083282 rffM ECDH10B_3984 - UDP-N-acetyl-D-mannosaminuronic acid (ManNAcA) transferase 3620 53.46 0 4077830..4079215 + 461 170083283 yifK ECDH10B_3985 - transporter 3621 52.67 0 4079901..4081136 + 411 170083284 aslB ECDH10B_3990 - regulator of arylsulfatase activity 3622 53.20 0 4081295..4082950 - 551 170083285 aslA ECDH10B_3991 - acrylsulfatase-like enzyme 3623 54.97 0 4083629..4084825 - 398 170083286 hemY ECDH10B_3993 - protoheme IX synthesis protein 3624 52.90 0 4086031..4086771 - 246 170083287 hemD ECDH10B_3995 - uroporphyrinogen III synthase 3625 56.16 +1 4086768..4087709 - 313 170083288 hemC ECDH10B_3996 - hydroxymethylbilane synthase 3626 53.89 0 4090682..4091002 - 106 170083289 cyaY ECDH10B_3998 - frataxin, iron-binding and oxidizing protein 3627 49.79 0 4090793..4091278 + 161 170083290 yzcX ECDH10B_3999 - hypothetical protein 3628 52.45 0 4091465..4091668 + 67 170083291 yifL ECDH10B_4000 - lipoprotein 3629 55.15 0 4091705..4092529 + 274 170083292 dapF ECDH10B_4001 - diaminopimelate epimerase 3630 53.96 0 4093230..4094126 + 298 170083293 xerC ECDH10B_4003 - site-specific tyrosine recombinase 3631 55.79 0 4094126..4094842 + 238 170083294 yigB ECDH10B_4004 - hydrolase 3632 57.70 +1 4094926..4097088 + 720 170083295 uvrD ECDH10B_4005 - DNA-dependent ATPase I and helicase II 3633 47.84 0 4097235..4097999 - 254 170083296 yigE ECDH10B_4006 - hypothetical protein 3634 52.68 0 4098369..4099319 + 316 170083297 corA ECDH10B_4007 - magnesium/nickel/cobalt transporter 3635 34.91 -2 4099362..4099742 - 126 170083298 yigF ECDH10B_4008 - inner membrane protein 3636 32.81 -2 4099756..4100136 - 126 170083299 yigG ECDH10B_4009 - inner membrane protein 3637 50.62 0 4100231..4101121 - 296 170083300 rarD ECDH10B_4010 - chloramphenical resistance permease 3638 53.21 0 4101173..4101640 - 155 170083301 yigI ECDH10B_4011 - hypothetical protein 3639 51.26 0 4101805..4102674 + 289 170083302 pldA ECDH10B_4012 - outer membrane phospholipase A 3640 55.14 0 4102807..4104636 + 609 170083303 recQ ECDH10B_4013 - ATP-dependent DNA helicase 3641 52.50 0 4104700..4105320 + 206 170083304 rhtC ECDH10B_4014 - threonine efflux system 3642 52.17 0 4105382..4106002 - 206 170083305 rhtB ECDH10B_4015 - neutral amino-acid efflux system 3643 53.76 0 4106113..4107135 + 340 170083306 pldB ECDH10B_4016 - lysophospholipase L(2) 3644 51.56 0 4107143..4107943 + 266 170083307 yigL ECDH10B_4017 - hydrolase 3645 56.29 +1 4108806..4109759 - 317 170083308 metR ECDH10B_4019 - DNA-binding transcriptional activator, homocysteine-binding 3646 56.23 +1 4109996..4112257 + 753 170083309 metE ECDH10B_4020 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase 3647 54.53 0 4112297..4113112 - 271 170083310 ysgA ECDH10B_4021 - hydrolase 3648 54.07 0 4113374..4114135 + 253 170083311 udp ECDH10B_4022 - uridine phosphorylase 3649 53.08 0 4114276..4115703 + 475 170083312 rmuC ECDH10B_4023 - recombination limiting protein 3650 52.12 0 4115798..4116553 + 251 170083313 ubiE ECDH10B_4024 - bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase 3651 55.78 0 4116567..4117172 + 201 170083314 yigP ECDH10B_4025 - hypothetical protein 3652 49.97 0 4117169..4118809 + 546 170083315 ubiB ECDH10B_4026 - 2-octaprenylphenol hydroxylase 3653 45.56 -1 4118888..4119157 + 89 170083316 tatA ECDH10B_4027 - TatABCE protein translocation system subunit 3654 55.43 0 4119161..4119676 + 171 170083317 tatB ECDH10B_4028 - TatABCE protein translocation system subunit 3655 51.61 0 4119679..4120455 + 258 170083318 tatC ECDH10B_4029 - TatABCE protein translocation system subunit 3656 54.28 0 4120497..4121279 + 260 170083319 tatD ECDH10B_4030 - Mg-dependent DNase 3657 49.69 0 4121276..4121764 - 162 170083320 rfaH ECDH10B_4031 - DNA-binding transcriptional antiterminator 3658 53.82 0 4121931..4123424 + 497 170083321 ubiD ECDH10B_4032 - 3-octaprenyl-4-hydroxybenzoate decarboxylase 3659 52.85 0 4123470..4124171 + 233 170083322 fre ECDH10B_4033 - flavin reductase 3660 57.73 +1 4124552..4125715 - 387 170083323 fadA ECDH10B_4034 - 3-ketoacyl-CoA thiolase (thiolase I) 3661 55.21 0 4125725..4127914 - 729 170083324 fadB ECDH10B_4035 - fused 3-hydroxybutyryl-CoA epimerase and delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase and enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase 3662 53.68 0 4128104..4129435 + 443 170083325 pepQ ECDH10B_4036 - proline dipeptidase 3663 55.61 0 4129435..4130049 + 204 170083326 yigZ ECDH10B_4037 - elongation factor 3664 53.10 0 4130088..4131539 + 483 170083327 trkH ECDH10B_4038 - potassium transporter 3665 51.83 0 4131551..4132096 + 181 170083328 hemG ECDH10B_4039 - protoporphyrin oxidase, flavoprotein 3666 48.73 0 4137849..4138361 - 170 170083329 mobB ECDH10B_4045 - molybdopterin-guanine dinucleotide biosynthesis protein B 3667 50.09 0 4138358..4138942 - 194 170083330 mobA ECDH10B_4046 - molybdopterin-guanine dinucleotide synthase 3668 46.30 -1 4139012..4139281 + 89 170083331 yihD ECDH10B_4047 - hypothetical protein 3669 48.63 0 4139358..4140344 + 328 170083332 yihE ECDH10B_4048 - kinase 3670 48.01 0 4140361..4140987 + 208 170083333 dsbA ECDH10B_4049 - periplasmic protein disulfide isomerase I 3671 41.65 -1 4141142..4142572 + 476 170083334 yihF ECDH10B_4050 - hypothetical protein 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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