version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3520 52.01 0 3951567..3951914 - 115 170083183 yidH ECDH10B_3859 - inner membrane protein 3521 48.00 0 3952022..3952471 + 149 170083184 yidI ECDH10B_3860 - inner membrane protein 3522 52.01 0 3952518..3954011 - 497 170083185 yidJ ECDH10B_3861 - sulfatase/phosphatase 3523 53.50 0 3954008..3955723 - 571 170083186 yidK ECDH10B_3862 - transporter 3524 43.51 -1 3955860..3956783 + 307 170083187 yidL ECDH10B_3863 - DNA-binding transcriptional regulator 3525 51.32 0 3959506..3960222 + 238 170083188 yidP ECDH10B_3870 - DNA-binding transcriptional regulator 3526 52.89 0 3960219..3961880 - 553 170083189 yidE ECDH10B_3871 - transporter 3527 48.95 0 3962076..3962504 - 142 170083190 ibpB ECDH10B_3872 - heat shock chaperone 3528 47.10 0 3962616..3963029 - 137 170083191 ibpA ECDH10B_3873 - heat shock chaperone 3529 53.75 0 3963335..3963667 + 110 170083192 yidQ ECDH10B_3874 - outer membrane protein 3530 54.98 0 3963669..3964883 - 404 170083193 yidR ECDH10B_3875 - hypothetical protein 3531 52.98 0 3966045..3967337 - 430 170083194 dgoT ECDH10B_3877 - D-galactonate transporter 3532 52.83 0 3967457..3968605 - 382 170083195 dgoD ECDH10B_3878 - galactonate dehydratase 3533 59.39 +1 3968602..3969219 - 205 170083196 dgoA ECDH10B_3879 - 2-oxo-3-deoxygalactonate 6-phosphate aldolase 3534 54.15 0 3969203..3970081 - 292 170083197 dgoK ECDH10B_3880 - 2-oxo-3-deoxygalactonate kinase 3535 55.36 0 3970078..3970767 - 229 170083198 dgoR ECDH10B_3881 - DNA-binding transcriptional regulator 3536 42.92 -1 3971045..3971701 + 218 170083199 yidX ECDH10B_3882 - lipoproteinc 3537 51.05 0 3971747..3972559 - 270 170083200 yidA ECDH10B_3883 - hydrolase 3538 51.13 0 3972674..3973072 - 132 170083201 yidB ECDH10B_3884 - hypothetical protein 3539 55.03 0 3975755..3976828 - 357 170083202 recF ECDH10B_3886 - gap repair protein 3540 54.22 0 3976828..3977928 - 366 170083203 dnaN ECDH10B_3887 - DNA polymerase III, beta subunit 3541 51.77 0 3979943..3980083 + 46 170083204 rpmH ECDH10B_3889 - 50S ribosomal subunit protein L34 3542 55.83 0 3980100..3980459 + 119 170083205 rnpA ECDH10B_3890 - protein C5 component of RNase P 3543 54.65 0 3980423..3980680 + 85 170083206 yidD ECDH10B_3891 - hypothetical protein 3544 53.67 0 3980683..3982329 + 548 170083207 yidC ECDH10B_3892 - cytoplasmic insertase into membrane protein, Sec system 3545 56.34 +1 3982435..3983799 + 454 170083208 trmE ECDH10B_3893 - GTPase 3546 34.67 -2 3984042..3984116 + 24 170083209 tnaC ECDH10B_3894 - tryptophanase leader peptide 3547 50.85 0 3984337..3985752 + 471 170083210 tnaA ECDH10B_3895 - tryptophanase/L-cysteine desulfhydrase, PLP-dependent 3548 46.47 0 3985843..3987090 + 415 170083211 tnaB ECDH10B_3896 - tryptophan transporter of low affinity 3549 53.06 0 3987222..3988397 + 391 170083212 mdtL ECDH10B_3897 - multidrug efflux system protein 3550 52.19 0 3988372..3989331 + 319 170083213 yidZ ECDH10B_3898 - DNA-binding transcriptional regulator 3551 52.10 0 3989476..3990237 + 253 170083214 yieE ECDH10B_3899 - phosphopantetheinyl transferase 3552 52.73 0 3990259..3990825 + 188 170083215 yieF ECDH10B_3900 - chromate reductase, class I, flavoprotein 3553 53.74 0 3990879..3992216 - 445 170083216 yieG ECDH10B_3901 - inner membrane protein 3554 48.05 0 3992381..3993046 + 221 170083217 yieH ECDH10B_3902 - hydrolase 3555 43.80 -1 3993113..3993580 + 155 170083218 yieI ECDH10B_3903 - inner membrane protein 3556 44.56 -1 3993629..3994216 + 195 170083219 cbrC ECDH10B_3904 - hypothetical protein 3557 49.52 0 3994278..3995000 - 240 170083220 yieK ECDH10B_3905 - 6-phosphogluconolactonase 3558 49.54 0 3995015..3996211 - 398 170083221 yieL ECDH10B_3906 - xylanase 3559 45.15 -1 3996211..3997827 - 538 170083222 bglH ECDH10B_3907 - carbohydrate-specific outer membrane porin, cryptic 3560 48.55 0 3997896..3999308 - 470 170083223 bglB ECDH10B_3908 - cryptic phospho-beta-glucosidase B 3561 51.17 0 3999327..4001204 - 625 170083224 bglF ECDH10B_3909 - fused beta-glucoside-specific PTS enzymes: IIA component; IIB component; IIC component 3562 42.89 -1 4001338..4002174 - 278 170083225 bglG ECDH10B_3910 - transcriptional antiterminator of the bgl operon 3563 52.62 0 4002460..4003185 - 241 170083226 phoU ECDH10B_3911 - negative regulator of PhoR/PhoB two-component regulator 3564 52.33 0 4003200..4003973 - 257 170083227 pstB ECDH10B_3912 - phosphate ABC transporter ATP-binding protein 3565 56.23 +1 4004156..4005046 - 296 170083228 pstA ECDH10B_3913 - phosphate ABC transporter permease 3566 54.69 0 4005046..4006005 - 319 170083229 pstC ECDH10B_3914 - phosphate ABC transporter permease 3567 51.49 0 4006092..4007132 - 346 170083230 pstS ECDH10B_3915 - phosphate ABC transporter periplasmic-binding protein 3568 52.66 0 4009437..4010807 - 456 170083231 glmU ECDH10B_3917 - fused N-acetyl glucosamine-1-phosphate uridyltransferase; glucosamine-1-phosphate acetyl transferase 3569 55.24 0 4011160..4011579 - 139 170083232 atpC ECDH10B_3918 - F1 sector of membrane-bound ATP synthase, epsilon subunit 3570 54.74 0 4011600..4012982 - 460 170083233 atpD ECDH10B_3919 - F1 sector of membrane-bound ATP synthase, beta subunit 3571 53.47 0 4013009..4013872 - 287 170083234 atpG ECDH10B_3920 - F1 sector of membrane-bound ATP synthase, gamma subunit 3572 53.37 0 4013923..4015464 - 513 170083235 atpA ECDH10B_3921 - F1 sector of membrane-bound ATP synthase, alpha subunit 3573 51.87 0 4015477..4016010 - 177 170083236 atpH ECDH10B_3922 - F1 sector of membrane-bound ATP synthase, delta subunit 3574 52.87 0 4016025..4016495 - 156 170083237 atpF ECDH10B_3923 - F0 sector of membrane-bound ATP synthase, subunit b 3575 54.17 0 4016557..4016796 - 79 170083238 atpE ECDH10B_3924 - F0 sector of membrane-bound ATP synthase, subunit c 3576 50.25 0 4016843..4017658 - 271 170083239 atpB ECDH10B_3925 - F0 sector of membrane-bound ATP synthase, subunit a 3577 52.23 0 4017667..4018047 - 126 170083240 atpI ECDH10B_3926 - ATP synthase, membrane-bound accesory subunit 3578 48.72 0 4018664..4019287 - 207 170083241 gidB ECDH10B_3927 - methyltransferase, SAM-dependent methyltransferase, glucose-inhibited cell-division protein 3579 54.39 0 4019351..4021240 - 629 170083242 gidA ECDH10B_3928 - glucose-inhibited cell-division protein 3580 50.00 0 4021619..4022062 - 147 170083243 mioC ECDH10B_3930 - FMN-binding protein MioC 3581 49.46 0 4022152..4022610 - 152 170083244 asnC ECDH10B_3931 - DNA-binding transcriptional dual regulator 3582 56.50 +1 4022762..4023754 + 330 170083245 asnA ECDH10B_3932 - asparagine synthetase A 3583 52.75 0 4023759..4025210 - 483 170083246 viaA ECDH10B_3933 - von Willebrand factor type A domain-containing protein 3584 51.42 0 4026923..4028791 + 622 170083247 trkD ECDH10B_3935 - potassium transporter 3585 47.62 0 4028958..4029377 + 139 170083248 rbsD ECDH10B_3936 - cytoplasmic sugar-binding protein 3586 51.20 0 4029385..4030890 + 501 170083249 rbsA ECDH10B_3937 - sugar ABC transporter ATP-binding protein 3587 53.42 0 4030895..4031860 + 321 170083250 rbsC ECDH10B_3938 - sugar ABC transporter membrane protein 3588 52.86 0 4031885..4032775 + 296 170083251 rbsB ECDH10B_3939 - sugar ABC transporter periplasmic-binding protein 3589 51.94 0 4032901..4033830 + 309 170083252 rbsK ECDH10B_3940 - ribokinase 3590 49.09 0 4036128..4037555 - 475 170083253 hsrA ECDH10B_3943 - multidrug or homocysteine efflux system 3591 49.35 0 4037578..4038270 - 230 170083254 yieP ECDH10B_3944 - transcriptional regulator 3592 48.45 0 4044071..4044910 - 279 170083255 hdfR ECDH10B_3951 - DNA-binding transcriptional regulator 3593 48.08 0 4045029..4045367 + 112 170083256 yifE ECDH10B_3952 - hypothetical protein 3594 50.81 0 4045392..4046942 - 516 170083257 yifB ECDH10B_3953 - transcriptional regulator 3595 53.54 0 4047265..4047363 + 32 170083258 ilvL ECDH10B_3954 - ilvG operon leader peptide 3596 49.24 0 4049144..4049407 + 87 170083259 ilvM ECDH10B_3958 - acetolactate synthase II, small subunit 3597 54.95 0 4049427..4050356 + 309 170083260 ilvE ECDH10B_3959 - branched-chain amino-acid aminotransferase 3598 58.77 +1 4052274..4053818 + 514 170083261 ilvA ECDH10B_3961 - threonine deaminase 3599 57.61 +1 4053870..4054763 - 297 170083262 ilvY ECDH10B_3962 - DNA-binding transcriptional dual regulator 3600 53.79 0 4054913..4056388 + 491 170083263 ilvC ECDH10B_3963 - ketol-acid reductoisomerase, NAD(P)-binding 3601 51.77 0 4056475..4056756 - 93 170083264 ppiC ECDH10B_3964 - peptidyl-prolyl cis-trans isomerase C (rotamase C) 3602 53.46 0 4057620..4059641 + 673 170083265 rep ECDH10B_3967 - DNA helicase and single-stranded DNA-dependent ATPase 3603 53.67 0 4059688..4061172 - 494 170083266 gpp ECDH10B_3968 - guanosine pentaphosphatase/exopolyphosphatase 3604 52.53 0 4061308..4062573 - 421 170083267 rhlB ECDH10B_3969 - ATP-dependent RNA helicase 3605 50.91 0 4062704..4063033 + 109 170083268 trxA ECDH10B_3970 - thioredoxin 1 3606 49.02 0 4063174..4063275 + 33 170083269 rhoL ECDH10B_3971 - Rho operon leader peptide 3607 50.32 0 4063360..4064619 + 419 170083270 rho ECDH10B_3972 - transcription termination factor 3608 49.46 0 4064859..4065962 + 367 170083271 rfe ECDH10B_3973 - undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase 3609 52.72 0 4065974..4067020 + 348 170083272 wzzE ECDH10B_3974 - entero common antigen (ECA) polysaccharide chain length modulator 3610 52.61 0 4067076..4068206 + 376 170083273 rffE ECDH10B_3975 - UDP-N-acetylglucosamine 2-epimerase 3611 53.76 0 4068203..4069465 + 420 170083274 rffD ECDH10B_3976 - UDP-N-acetyl-D-mannosamine dehydrogenase 3612 53.75 0 4069465..4070532 + 355 170083275 rffG ECDH10B_3977 - dTDP-D-glucose 4,6-dehydratase 3613 55.10 0 4070551..4071432 + 293 170083276 rffH ECDH10B_3978 - glucose-1-phosphate thymidylyltransferase 3614 55.56 0 4071410..4072084 + 224 170083277 rffC ECDH10B_3979 - dTDP-fucosamine acetyltransferase 3615 54.38 0 4072089..4073219 + 376 170083278 rffA ECDH10B_3980 - dTDP-4-keto-6-deoxy-D-glucose aminotransferase 3616 53.64 0 4073221..4074471 + 416 170083279 wzxE ECDH10B_3981 - lipid III translocase 3617 52.87 0 4074468..4075547 + 359 170083280 rffT ECDH10B_3982 - 4-alpha-L-fucosyltransferase 3618 52.40 0 4075544..4076896 + 450 170083281 wzyE ECDH10B_3983 - entero common antigen (ECA) polysaccharide chain polymerase 3619 53.17 0 4076899..4077639 + 246 170083282 rffM ECDH10B_3984 - UDP-N-acetyl-D-mannosaminuronic acid (ManNAcA) transferase 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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