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Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 303 52.43 0 337580..337888 - 102 170079966 yaiY ECDH10B_0336 - inner membrane protein 304 48.83 0 338148..338360 + 70 170079967 yaiZ ECDH10B_0337 - inner membrane protein 305 51.05 0 338384..339478 - 364 170079968 ddlA ECDH10B_0338 - D-alanine-D-alanine ligase A 306 46.36 -1 339941..340201 + 86 170079969 iraP ECDH10B_0339 - anti-adaptor protein 307 53.39 0 340302..341717 + 471 170079970 phoA ECDH10B_0340 - alkaline phosphatase 308 47.66 0 341836..342156 + 106 170079971 psiF ECDH10B_0341 - hypothetical protein 309 53.67 0 342258..343373 + 371 170079972 adrA ECDH10B_0342 - diguanylate cyclase 310 54.57 0 343390..344199 - 269 170079973 proC ECDH10B_0343 - pyrroline-5-carboxylate reductase, NAD(P)-binding 311 56.43 +1 344319..344777 + 152 170079974 yaiI ECDH10B_0344 - hypothetical protein 312 52.19 0 344960..345484 + 174 170079975 aroL ECDH10B_0345 - shikimate kinase II 313 48.44 0 345534..345725 + 63 170079976 yaiA ECDH10B_0346 - hypothetical protein 314 46.46 0 345983..346660 + 225 170079977 aroM ECDH10B_0347 - hypothetical protein 315 51.93 0 346732..347016 + 94 170079978 yaiE ECDH10B_0348 - hypothetical protein 316 48.58 0 347224..347505 + 93 170079979 ykiA ECDH10B_0349 - hypothetical protein 317 51.54 0 347663..348574 - 303 170079980 rdgC ECDH10B_0350 - DNA-binding protein, non-specific 318 55.67 0 348699..349607 + 302 170079981 mak ECDH10B_0351 - manno(fructo)kinase 319 50.72 0 349852..351036 - 394 170079982 araJ ECDH10B_0352 - transporter 320 53.80 0 351162..354308 - 1048 170079983 sbcC ECDH10B_0353 - exonuclease, dsDNA, ATP-dependent 321 53.28 0 354305..355507 - 400 170079984 sbcD ECDH10B_0354 - exonuclease, dsDNA, ATP-dependent 322 54.49 0 355697..356386 + 229 170079985 phoB ECDH10B_0355 - DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) 323 53.01 0 356444..357739 + 431 170079986 phoR ECDH10B_0356 - sensory histidine kinase in two-component regulatory system with PhoB 324 55.61 0 358146..359465 + 439 170079987 brnQ ECDH10B_0357 - branched chain amino acid ABC transporter 325 52.91 0 359541..360914 + 457 170079988 proY ECDH10B_0358 - cryptic proline transporter 326 54.57 0 361070..362887 + 605 170079989 malZ ECDH10B_0359 - maltodextrin glucosidase 327 53.09 0 362892..363473 - 193 170079990 acpH ECDH10B_0360 - ACP phosphodiesterase 328 54.15 0 363566..364636 + 356 170079991 queA ECDH10B_0361 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 329 51.33 0 364692..365819 + 375 170079992 tgt ECDH10B_0362 - tRNA-guanine transglycosylase 330 49.55 0 365842..366174 + 110 170079993 yajC ECDH10B_0363 - SecYEG protein translocase auxillary subunit 331 53.19 0 366202..368049 + 615 170079994 secD ECDH10B_0364 - SecYEG protein translocase auxillary subunit 332 51.65 0 368060..369031 + 323 170079995 secF ECDH10B_0365 - SecYEG protein translocase auxillary subunit 333 47.13 0 369160..369507 + 115 170079996 yajD ECDH10B_0366 - hypothetical protein 334 50.51 0 369684..370568 - 294 170079997 tsx ECDH10B_0367 - nucleoside channel, receptor of phage T6 and colicin K 335 47.59 0 370867..371406 - 179 170079998 yajI ECDH10B_0368 - lipoprotein 336 51.33 0 371557..372006 + 149 170079999 nrdR ECDH10B_0369 - DNA-binding transcriptional regulator 337 55.34 0 372010..373113 + 367 170080000 ribD ECDH10B_0370 - fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase 338 52.23 0 373202..373672 + 156 170080001 ribE ECDH10B_0371 - riboflavin synthase beta chain 339 53.81 0 373692..374111 + 139 170080002 nusB ECDH10B_0372 - transcription antitermination protein 340 54.40 0 374189..375166 + 325 170080003 thiL ECDH10B_0373 - thiamin-monophosphate kinase 341 53.18 0 375144..375662 + 172 170080004 pgpA ECDH10B_0374 - phosphatidylglycerophosphatase A 342 53.03 0 375716..376690 - 324 170080005 yajO ECDH10B_0375 - oxidoreductase, NAD(P)-binding 343 54.27 0 376870..378732 - 620 170080006 dxs ECDH10B_0376 - 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring 344 54.22 0 378757..379656 - 299 170080007 ispA ECDH10B_0377 - geranyltranstransferase 345 55.14 0 379656..379898 - 80 170080008 xseB ECDH10B_0378 - exonuclease VII small subunit 346 52.17 0 380104..381552 + 482 170080009 thiI ECDH10B_0379 - sulfurtransferase required for thiamine and 4-thiouridine biosynthesis 347 56.51 +1 381606..382196 - 196 170080010 yajL ECDH10B_0380 - hypothetical protein 348 51.86 0 382159..383070 - 303 170080011 panE ECDH10B_0381 - 2-dehydropantoate reductase, NADPH-specific 349 50.00 0 383238..383729 + 163 170080012 yajQ ECDH10B_0382 - nucleotide binding protein 350 52.60 0 383857..385221 - 454 170080013 yajR ECDH10B_0383 - transporter 351 53.76 0 385370..386260 - 296 170080014 cyoE ECDH10B_0384 - protoheme IX farnesyltransferase 352 49.70 0 386272..386601 - 109 170080015 cyoD ECDH10B_0385 - cytochrome o ubiquinol oxidase subunit IV 353 53.50 0 386601..387215 - 204 170080016 cyoC ECDH10B_0386 - cytochrome o ubiquinol oxidase subunit III 354 52.96 0 387205..389196 - 663 170080017 cyoB ECDH10B_0387 - cytochrome o ubiquinol oxidase subunit I 355 50.95 0 389218..390165 - 315 170080018 cyoA ECDH10B_0388 - cytochrome o ubiquinol oxidase subunit II 356 53.66 0 390625..392100 - 491 170080019 ampG ECDH10B_0389 - muropeptide transporter 357 51.30 0 392144..392722 - 192 170080020 yajG ECDH10B_0390 - lipoprotein 358 48.43 0 393027..393344 + 105 170080021 bolA ECDH10B_0391 - regulator of penicillin binding proteins and beta lactamase transcription (morphogene) 359 51.19 0 393688..394986 + 432 170080022 tig ECDH10B_0392 - peptidyl-prolyl cis/trans isomerase (trigger factor) 360 51.12 0 395232..395855 + 207 170080023 clpP ECDH10B_0393 - proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases 361 51.53 0 395981..397255 + 424 170080024 clpX ECDH10B_0394 - ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease 362 52.31 0 397443..399797 + 784 170080025 lon ECDH10B_0395 - DNA-binding ATP-dependent protease La 363 49.08 0 400006..400278 + 90 170080026 hupB ECDH10B_0396 - HU, DNA-binding transcriptional regulator, beta subunit 364 52.35 0 400470..402341 + 623 170080027 ppiD ECDH10B_0397 - peptidyl-prolyl cis-trans isomerase (rotamase D) 365 54.84 0 402492..402863 + 123 170080028 ybaV ECDH10B_0398 - hypothetical protein 366 46.12 -1 402957..403355 + 132 170080029 ybaW ECDH10B_0399 - hypothetical protein 367 51.72 0 403407..404102 - 231 170080030 queC ECDH10B_0400 - enzyme in preQ0 biosynthesis 368 52.97 0 404167..405867 - 566 170080031 ybaE ECDH10B_0401 - ABC transporter periplasmic-binding protein 369 51.40 0 405967..406785 + 272 170080032 cof ECDH10B_0402 - thiamin pyrimidine pyrophosphate hydrolase 370 51.85 0 406938..407396 + 152 170080033 ybaO ECDH10B_0403 - DNA-binding transcriptional regulator 371 54.03 0 407426..409198 + 590 170080034 mdlA ECDH10B_0404 - multidrug ABC transporter ATP-binding protein 372 56.29 +1 409191..410972 + 593 170080035 mdlB ECDH10B_0405 - multidrug ABC transporter ATP-binding protein 373 50.74 0 411153..411491 + 112 170080036 glnK ECDH10B_0406 - nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB 374 56.18 +1 411521..412807 + 428 170080037 amtB ECDH10B_0407 - ammonium transporter 375 52.50 0 412856..413716 - 286 170080038 tesB ECDH10B_0408 - acyl-CoA thioesterase II 376 53.93 0 413934..414506 + 190 170080039 ybaY ECDH10B_0409 - outer membrane lipoprotein 377 54.10 0 414537..414926 - 129 170080040 ybaZ ECDH10B_0410 - methyltransferase 378 49.44 0 415227..415580 + 117 170080041 ybaA ECDH10B_0412 - hypothetical protein 379 48.03 0 415622..417172 - 516 170080042 ylaB ECDH10B_0413 - inner membrane protein 380 47.13 0 417336..417806 - 156 170080043 ylaC ECDH10B_0414 - inner membrane protein 381 48.37 0 417922..418473 - 183 170080044 maa ECDH10B_0415 - maltose O-acetyltransferase 382 39.73 -2 418645..418863 - 72 170080045 hha ECDH10B_0416 - haemolysin expression modulating protein 383 40.53 -2 418889..419263 - 124 170080046 ybaJ ECDH10B_0417 - hypothetical protein 384 53.97 0 419809..422958 - 1049 170080047 acrB ECDH10B_0418 - multidrug efflux system protein 385 53.85 0 422981..424174 - 397 170080048 acrA ECDH10B_0419 - multidrug efflux system 386 45.37 -1 424316..424963 + 215 170080049 acrR ECDH10B_0420 - DNA-binding transcriptional repressor 387 51.89 0 425091..428453 + 1120 170080050 kefA ECDH10B_0421 - fused protein; mechanosensitive channel protein 388 48.15 0 428665..428826 - 53 170080051 ybaM ECDH10B_0422 - hypothetical protein 389 58.90 +1 428840..429367 - 175 170080052 priC ECDH10B_0423 - primosomal replication protein N'' 390 52.12 0 429437..429814 + 125 170080053 ybaN ECDH10B_0424 - inner membrane protein 391 54.35 0 429967..430518 + 183 170080054 apt ECDH10B_0425 - adenine phosphoribosyltransferase 392 57.66 +1 430647..432578 + 643 170080055 dnaX ECDH10B_0426 - DNA polymerase III/DNA elongation factor III, tau and gamma subunits 393 52.73 0 432631..432960 + 109 170080056 ybaB ECDH10B_0427 - hypothetical protein 394 57.76 +1 432960..433565 + 201 170080057 recR ECDH10B_0428 - gap repair protein 395 52.85 0 433675..435549 + 624 170080058 htpG ECDH10B_0429 - HSP90 family molecular chaperone 396 51.78 0 435730..436374 + 214 170080059 adk ECDH10B_0430 - adenylate kinase 397 53.89 0 436610..437572 + 320 170080060 hemH ECDH10B_0431 - ferrochelatase 398 52.08 0 437569..438528 - 319 170080061 aes ECDH10B_0432 - acetyl esterase 399 51.88 0 438680..439984 + 434 170080062 gsk ECDH10B_0433 - inosine/guanosine kinase 400 55.46 0 440117..441793 - 558 170080063 ybaL ECDH10B_0434 - transporter 401 52.42 0 442031..443251 - 406 170080064 fsr ECDH10B_0435 - fosmidomycin efflux system 402 50.88 0 443469..445121 + 550 170080065 ushA ECDH10B_0436 - bifunctional UDP-sugar hydrolase and 5'-nucleotidase 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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