version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3361 54.58 0 3755000..3756157 + 385 170083024 mdtE ECDH10B_3689 - multidrug resistance efflux transporter 3362 53.02 0 3756182..3759295 + 1037 170083025 mdtF ECDH10B_3690 - multidrug transporter, RpoS-dependent 3363 41.84 -1 3759658..3760386 - 242 170083026 gadW ECDH10B_3691 - DNA-binding transcriptional activator 3364 40.97 -2 3760754..3761578 - 274 170083027 gadX ECDH10B_3693 - DNA-binding transcriptional dual regulator 3365 53.96 0 3761948..3763348 - 466 170083028 gadA ECDH10B_3694 - glutamate decarboxylase A, PLP-dependent 3366 48.43 0 3763559..3764956 - 465 170083029 yhjA ECDH10B_3695 - cytochrome C peroxidase 3367 53.94 0 3765360..3767009 + 549 170083030 treF ECDH10B_3696 - cytoplasmic trehalase 3368 47.76 0 3767060..3767662 - 200 170083031 yhjB ECDH10B_3697 - DNA-binding response regulator in two-component regulatory system 3369 52.06 0 3768110..3769081 + 323 170083032 yhjC ECDH10B_3698 - DNA-binding transcriptional regulator 3370 52.66 0 3769130..3770143 + 337 170083033 yhjD ECDH10B_3699 - inner membrane protein 3371 55.63 0 3770554..3771876 + 440 170083034 yhjE ECDH10B_3700 - transporter 3372 53.23 0 3772058..3774133 - 691 170083035 yhjG ECDH10B_3701 - outer membrane biogenesis protein 3373 52.73 0 3774188..3774955 - 255 170083036 yhjH ECDH10B_3702 - EAL domain-containing flagellar function protein 3374 57.10 +1 3775187..3776116 + 309 170083037 kdgK ECDH10B_3703 - ketodeoxygluconokinase 3375 53.44 0 3776212..3777708 - 498 170083038 yhjJ ECDH10B_3704 - zinc-dependent peptidase 3376 52.62 0 3779398..3781347 - 649 170083039 yhjK ECDH10B_3706 - diguanylate cyclase 3377 57.11 +1 3781468..3784941 - 1157 170083040 bcsC ECDH10B_3707 - cellulose synthase subunit 3378 54.74 0 3784923..3786029 - 368 170083041 bcsZ ECDH10B_3708 - endo-1,4-D-glucanase 3379 54.91 0 3786036..3788375 - 779 170083042 bcsB ECDH10B_3709 - regulator of cellulose synthase, cyclic di-GMP binding 3380 55.36 0 3788386..3791004 - 872 170083043 bcsA ECDH10B_3710 - cellulose synthase, catalytic subunit 3381 46.03 -1 3791765..3791953 - 62 170083044 yhjR ECDH10B_3712 - hypothetical protein 3382 48.44 0 3793794..3793985 + 63 170083045 bcsF ECDH10B_3714 - hypothetical protein 3383 52.68 0 3793982..3795661 + 559 170083046 bcsG ECDH10B_3715 - inner membrane protein 3384 52.78 0 3795748..3795855 - 35 170083047 ldrD ECDH10B_3716 - toxic polypeptide, small 3385 45.44 -1 3796331..3797602 + 423 170083048 yhjV ECDH10B_3718 - transporter 3386 56.12 +1 3797632..3798636 - 334 170083049 dppF ECDH10B_3719 - peptide ABC transporter ATP-binding protein 3387 56.71 +1 3798633..3799616 - 327 170083050 dppD ECDH10B_3720 - peptide ABC transporter ATP-binding protein 3388 59.03 +1 3799627..3800529 - 300 170083051 dppC ECDH10B_3721 - peptide ABC transporter membrane protein 3389 56.47 +1 3800539..3801558 - 339 170083052 dppB ECDH10B_3722 - peptide ABC transporter membrane protein 3390 51.55 0 3801866..3803473 - 535 170083053 dppA ECDH10B_3723 - peptide ABC transporter periplasmic substrate-binding protein 3391 50.41 0 3804384..3806075 - 563 170083054 eptB ECDH10B_3725 - metal dependent hydrolase 3392 51.20 0 3806399..3807607 - 402 170083055 yhjX ECDH10B_3726 - transporter 3393 50.21 0 3807836..3808534 - 232 170083056 yhjY ECDH10B_3727 - hypothetical protein 3394 49.82 0 3808692..3809255 + 187 170083057 tag ECDH10B_3728 - 3-methyl-adenine DNA glycosylase I, constitutive 3395 52.15 0 3809252..3809692 + 146 170083058 yiaC ECDH10B_3729 - acyltransferase 3396 54.30 0 3809661..3811940 - 759 170083059 bisC ECDH10B_3730 - biotin sulfoxide reductase 3397 57.88 +1 3812147..3812806 + 219 170083060 yiaD ECDH10B_3731 - outer membrane lipoprotein 3398 52.00 0 3812910..3813884 + 324 170083061 tiaE ECDH10B_3732 - 2-keto-D-gluconate reductase (glyoxalate reductase) (2-ketoaldonate reductase) 3399 50.49 0 3813934..3814644 - 236 170083062 yiaF ECDH10B_3733 - hypothetical protein 3400 43.99 -1 3815078..3815368 + 96 170083063 yiaG ECDH10B_3734 - transcriptional regulator 3401 48.36 0 3815649..3815861 + 70 170083064 cspA ECDH10B_3735 - major cold shock protein 3402 35.29 -2 3816048..3816200 - 50 170083065 hokA ECDH10B_3736 - toxic polypeptide, small 3403 46.17 -1 3816280..3816801 + 173 170083066 insJ ECDH10B_3737 - IS150 protein InsA 3404 42.84 -1 3816798..3817649 + 283 170083067 insK ECDH10B_3738 - IS150 protein InsB 3405 55.41 0 3817928..3819997 - 689 170083068 glyS ECDH10B_3739 - glycine tRNA synthetase, beta subunit 3406 47.67 0 3821013..3821312 - 99 170083069 ysaB ECDH10B_3741 - hypothetical protein 3407 46.79 0 3821487..3822482 + 331 170083070 yiaH ECDH10B_3742 - inner membrane protein 3408 41.10 -2 3822524..3822961 - 145 170083071 yiaA ECDH10B_3743 - inner membrane protein 3409 41.52 -2 3823007..3823348 - 113 170083072 yiaB ECDH10B_3744 - inner membrane protein 3410 54.78 0 3823517..3824971 - 484 170083073 xylB ECDH10B_3745 - xylulokinase 3411 50.87 0 3825043..3826365 - 440 170083074 xylA ECDH10B_3746 - D-xylose isomerase 3412 44.01 -1 3826731..3827723 + 330 170083075 xylF ECDH10B_3747 - D-xylose ABC transporter periplasmic-binding protein 3413 47.08 0 3827801..3829342 + 513 170083076 xylG ECDH10B_3748 - D-xylose ABC transporter ATP-binding protein 3414 53.89 0 3829320..3830501 + 393 170083077 xylH ECDH10B_3749 - D-xylose ABC transporter membrane protein 3415 48.77 0 3830579..3831757 + 392 170083078 xylR ECDH10B_3750 - DNA-binding transcriptional activator, xylose-binding 3416 48.24 0 3831953..3832777 - 274 170083079 bax ECDH10B_3751 - hypothetical protein 3417 52.83 0 3833097..3835127 + 676 170083080 malS ECDH10B_3752 - alpha-amylase 3418 52.15 0 3835305..3836558 + 417 170083081 avtA ECDH10B_3753 - valine-pyruvate aminotransferase 3419 53.59 0 3836709..3837182 - 157 170083082 ysaA ECDH10B_3754 - hydrogenase, 4Fe-4S ferredoxin-type component 3420 52.18 0 3837284..3838132 - 282 170083083 yiaJ ECDH10B_3755 - DNA-binding transcriptional repressor 3421 53.05 0 3838333..3839331 + 332 170083084 yiaK ECDH10B_3756 - 2,3-diketo-L-gulonate dehydrogenase, NADH-dependent 3422 45.30 -1 3839343..3839810 + 155 170083085 yiaL ECDH10B_3757 - hypothetical protein 3423 44.09 -1 3839928..3840401 + 157 170083086 yiaM ECDH10B_3758 - transporter 3424 50.86 0 3840404..3841681 + 425 170083087 yiaN ECDH10B_3759 - transporter 3425 51.17 0 3841694..3842680 + 328 170083088 yiaO ECDH10B_3760 - transporter 3426 57.45 +1 3842684..3844180 + 498 170083089 lyxK ECDH10B_3761 - L-xylulose kinase 3427 59.43 +1 3844177..3844839 + 220 170083090 sgbH ECDH10B_3762 - 3-keto-L-gulonate 6-phosphate decarboxylase 3428 55.75 0 3844832..3845692 + 286 170083091 sgbU ECDH10B_3763 - L-xylulose 5-phosphate 3-epimerase 3429 57.33 +1 3845686..3846381 + 231 170083092 sgbE ECDH10B_3764 - L-ribulose-5-phosphate 4-epimerase 3430 48.72 0 3846728..3847468 - 246 170083093 yiaT ECDH10B_3765 - hypothetical protein 3431 47.69 0 3847592..3848566 + 324 170083094 yiaU ECDH10B_3766 - DNA-binding transcriptional regulator 3432 50.66 0 3848563..3849699 - 378 170083095 yiaV ECDH10B_3767 - membrane fusion protein (MFP) component of efflux pump, signal anchor 3433 46.60 0 3849705..3850028 - 107 170083096 yiaW ECDH10B_3768 - inner membrane protein 3434 54.78 0 3850573..3852111 - 512 170083097 aldB ECDH10B_3769 - aldehyde dehydrogenase B 3435 50.52 0 3852276..3853427 - 383 170083098 yiaY ECDH10B_3770 - Fe-containing alcohol dehydrogenase 3436 56.37 +1 3853617..3855461 - 614 170083099 selB ECDH10B_3771 - selenocysteinyl-tRNA-specific translation factor 3437 52.71 0 3856947..3857555 - 202 170083100 yibF ECDH10B_3773 - glutathione S-transferase 3438 33.69 -2 3861937..3862779 + 280 170083101 yibA ECDH10B_3775 - HEAT repeat-containing lyase 3439 50.28 0 3862821..3863522 + 233 170083102 yibJ ECDH10B_3776 - Rhs-family protein 3440 32.25 -2 3863777..3864238 + 153 170083103 yibG ECDH10B_3777 - hypothetical protein 3441 52.68 0 3865843..3866979 - 378 170083104 yibH ECDH10B_3778 - hypothetical protein 3442 51.52 0 3866982..3867344 - 120 170083105 yibI ECDH10B_3779 - inner membrane protein 3443 53.87 0 3867881..3869794 + 637 170083106 mtlA ECDH10B_3780 - fused mannitol-specific PTS enzymes: IIA components; IIB components; IIC components 3444 52.39 0 3870024..3871172 + 382 170083107 mtlD ECDH10B_3781 - mannitol-1-phosphate dehydrogenase, NAD(P)-binding 3445 51.02 0 3871172..3871759 + 195 170083108 mtlR ECDH10B_3782 - DNA-binding repressor 3446 49.05 0 3871771..3871980 - 69 170083109 yibT ECDH10B_3783 - hypothetical protein 3447 50.96 0 3872265..3872627 + 120 170083110 yibL ECDH10B_3784 - hypothetical protein 3448 55.13 0 3872999..3874654 + 551 170083111 lldP ECDH10B_3785 - L-lactate permease 3449 54.05 0 3874654..3875430 + 258 170083112 lldR ECDH10B_3786 - DNA-binding transcriptional repressor 3450 55.67 0 3875427..3876617 + 396 170083113 lldD ECDH10B_3787 - L-lactate dehydrogenase, FMN-linked 3451 55.06 0 3876815..3877288 + 157 170083114 yibK ECDH10B_3788 - rRNA methylase 3452 53.53 0 3877341..3878162 - 273 170083115 cysE ECDH10B_3789 - serine acetyltransferase 3453 56.76 +1 3878242..3879261 - 339 170083116 gpsA ECDH10B_3790 - glycerol-3-phosphate dehydrogenase (NAD+) 3454 50.85 0 3879261..3879728 - 155 170083117 secB ECDH10B_3791 - protein export chaperone 3455 52.38 0 3879791..3880042 - 83 170083118 grxC ECDH10B_3792 - glutaredoxin 3 3456 49.54 0 3880184..3880615 - 143 170083119 yibN ECDH10B_3793 - rhodanese-related sulfurtransferase 3457 53.46 0 3880860..3882404 + 514 170083120 gpmI ECDH10B_3794 - phosphoglycero mutase III, cofactor-independent 3458 57.06 +1 3882438..3883697 + 419 170083121 envC ECDH10B_3795 - protease with a role in cell division 3459 52.71 0 3883701..3884660 + 319 170083122 yibQ ECDH10B_3796 - polysaccharide deacetylase 3460 45.99 -1 3884647..3885681 - 344 170083123 yibD ECDH10B_3797 - glycosyl transferase 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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