version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 258 45.83 -1 287288..287551 - 87 170079921 ykgM ECDH10B_0285 - rpmE (L31) paralog 259 48.31 0 289131..290018 + 295 170079922 eaeH ECDH10B_0286 - attaching and effacing protein, pathogenesis factor 260 50.16 0 290056..290364 + 102 170079923 insE-1 ECDH10B_0287 - IS3 element protein InsE 261 55.13 0 290361..291227 + 288 170079924 insF-1 ECDH10B_0288 - IS3 element protein InsF 262 43.09 -1 291224..291910 - 228 170079925 ykgA ECDH10B_0289 - DNA-binding transcriptional regulator 263 44.95 -1 292500..293093 - 197 170079926 ykgB ECDH10B_0290 - inner membrane protein 264 35.44 -2 293105..293341 - 78 170079927 ykgI ECDH10B_0291 - hypothetical protein 265 45.55 -1 293450..294775 - 441 170079928 ykgC ECDH10B_0292 - oxidoreductase 266 51.23 0 295001..295855 + 284 170079929 ykgD ECDH10B_0293 - DNA-binding transcriptional regulator 267 50.56 0 296382..297101 + 239 170079930 ykgE ECDH10B_0294 - oxidoreductase 268 50.21 0 297112..298539 + 475 170079931 ykgF ECDH10B_0295 - amino acid dehydrogenase 269 52.16 0 298532..299227 + 231 170079932 ykgG ECDH10B_0296 - transporter 270 36.92 -2 299470..300138 - 222 170079933 ykgH ECDH10B_0297 - inner membrane protein 271 57.09 +1 300351..302021 - 556 170079934 betA ECDH10B_0298 - choline dehydrogenase, a flavoprotein 272 58.25 +1 302035..303507 - 490 170079935 betB ECDH10B_0299 - betaine aldehyde dehydrogenase, NAD-dependent 273 56.80 +1 303521..304108 - 195 170079936 betI ECDH10B_0300 - DNA-binding transcriptional repressor 274 55.31 0 304237..306270 + 677 170079937 betT ECDH10B_0301 - choline transporter of high affinity 275 45.91 -1 307145..308233 + 362 170079938 yahA ECDH10B_0302 - DNA-binding transcriptional regulator 276 49.30 0 308275..309207 - 310 170079939 yahB ECDH10B_0303 - DNA-bindng transcriptional regulator 277 52.81 0 309299..309796 - 165 170079940 yahC ECDH10B_0304 - inner membrane protein 278 45.38 -1 310054..310659 + 201 170079941 yahD ECDH10B_0305 - transcription regulator 279 47.11 0 310699..311562 + 287 170079942 yahE ECDH10B_0306 - hypothetical protein 280 55.56 0 311552..313099 + 515 170079943 yahF ECDH10B_0307 - acyl-CoA synthetase 281 57.43 +1 314014..315225 + 403 170079944 mhpT ECDH10B_0308 - 3-hydroxyphenylpropionic transporter 282 48.15 0 315327..315866 + 179 170079945 yaiL ECDH10B_0309 - nucleoprotein/polynucleotide-associated enzyme 283 48.56 0 316090..316923 - 277 170079946 frmB ECDH10B_0310 - esterase 284 53.69 0 317017..318126 - 369 170079947 frmA ECDH10B_0311 - alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase 285 53.26 0 318161..318436 - 91 170079948 frmR ECDH10B_0312 - regulator protein that represses frmRAB operon 286 50.13 0 318624..319397 - 257 170079949 yaiO ECDH10B_0313 - hypothetical protein 287 50.85 0 319861..320271 + 136 170079950 insC-1 ECDH10B_0316 - IS2 insertion element repressor InsA 288 55.08 0 320229..321134 + 301 170079951 insD-1 ECDH10B_0317 - IS2 insertion element transposase InsAB' 289 49.96 0 321294..322490 - 398 170079952 yaiP ECDH10B_0319 - glucosyltransferase 290 43.37 -1 322614..323171 - 185 170079953 yaiS ECDH10B_0320 - hypothetical protein 291 56.28 +1 323787..324749 + 320 170079954 tauA ECDH10B_0321 - taurine ABC transporter periplasmic substrate-binding protein 292 55.99 +1 324762..325529 + 255 170079955 tauB ECDH10B_0322 - taurine ABC transporter ATP-binding protein 293 57.25 +1 325526..326353 + 275 170079956 tauC ECDH10B_0323 - taurine ABC transporter membrane protein 294 54.46 0 326350..327201 + 283 170079957 tauD ECDH10B_0324 - taurine dioxygenase, 2-oxoglutarate-dependent 295 53.95 0 327308..328282 - 324 170079958 hemB ECDH10B_0325 - porphobilinogen synthase 296 30.37 -2 328452..328721 - 89 170079959 ykiB ECDH10B_0326 - hypothetical protein 297 55.13 0 330294..331160 - 288 170079960 insF-2 ECDH10B_0329 - IS3 element protein InsF 298 50.16 0 331157..331465 - 102 170079961 insE-2 ECDH10B_0330 - IS3 element protein InsE 299 40.36 -2 333016..333684 + 222 170079962 yaiV ECDH10B_0332 - DNA-binding transcriptional regulator 300 55.35 0 333685..334842 - 385 170079963 ampH ECDH10B_0333 - beta-lactamase/D-alanine carboxypeptidase 301 51.35 0 335194..336414 + 406 170079964 sbmA ECDH10B_0334 - transporter 302 53.42 0 336427..337521 + 364 170079965 yaiW ECDH10B_0335 - DNA-binding transcriptional regulator 303 52.43 0 337580..337888 - 102 170079966 yaiY ECDH10B_0336 - inner membrane protein 304 48.83 0 338148..338360 + 70 170079967 yaiZ ECDH10B_0337 - inner membrane protein 305 51.05 0 338384..339478 - 364 170079968 ddlA ECDH10B_0338 - D-alanine-D-alanine ligase A 306 46.36 -1 339941..340201 + 86 170079969 iraP ECDH10B_0339 - anti-adaptor protein 307 53.39 0 340302..341717 + 471 170079970 phoA ECDH10B_0340 - alkaline phosphatase 308 47.66 0 341836..342156 + 106 170079971 psiF ECDH10B_0341 - hypothetical protein 309 53.67 0 342258..343373 + 371 170079972 adrA ECDH10B_0342 - diguanylate cyclase 310 54.57 0 343390..344199 - 269 170079973 proC ECDH10B_0343 - pyrroline-5-carboxylate reductase, NAD(P)-binding 311 56.43 +1 344319..344777 + 152 170079974 yaiI ECDH10B_0344 - hypothetical protein 312 52.19 0 344960..345484 + 174 170079975 aroL ECDH10B_0345 - shikimate kinase II 313 48.44 0 345534..345725 + 63 170079976 yaiA ECDH10B_0346 - hypothetical protein 314 46.46 0 345983..346660 + 225 170079977 aroM ECDH10B_0347 - hypothetical protein 315 51.93 0 346732..347016 + 94 170079978 yaiE ECDH10B_0348 - hypothetical protein 316 48.58 0 347224..347505 + 93 170079979 ykiA ECDH10B_0349 - hypothetical protein 317 51.54 0 347663..348574 - 303 170079980 rdgC ECDH10B_0350 - DNA-binding protein, non-specific 318 55.67 0 348699..349607 + 302 170079981 mak ECDH10B_0351 - manno(fructo)kinase 319 50.72 0 349852..351036 - 394 170079982 araJ ECDH10B_0352 - transporter 320 53.80 0 351162..354308 - 1048 170079983 sbcC ECDH10B_0353 - exonuclease, dsDNA, ATP-dependent 321 53.28 0 354305..355507 - 400 170079984 sbcD ECDH10B_0354 - exonuclease, dsDNA, ATP-dependent 322 54.49 0 355697..356386 + 229 170079985 phoB ECDH10B_0355 - DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) 323 53.01 0 356444..357739 + 431 170079986 phoR ECDH10B_0356 - sensory histidine kinase in two-component regulatory system with PhoB 324 55.61 0 358146..359465 + 439 170079987 brnQ ECDH10B_0357 - branched chain amino acid ABC transporter 325 52.91 0 359541..360914 + 457 170079988 proY ECDH10B_0358 - cryptic proline transporter 326 54.57 0 361070..362887 + 605 170079989 malZ ECDH10B_0359 - maltodextrin glucosidase 327 53.09 0 362892..363473 - 193 170079990 acpH ECDH10B_0360 - ACP phosphodiesterase 328 54.15 0 363566..364636 + 356 170079991 queA ECDH10B_0361 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 329 51.33 0 364692..365819 + 375 170079992 tgt ECDH10B_0362 - tRNA-guanine transglycosylase 330 49.55 0 365842..366174 + 110 170079993 yajC ECDH10B_0363 - SecYEG protein translocase auxillary subunit 331 53.19 0 366202..368049 + 615 170079994 secD ECDH10B_0364 - SecYEG protein translocase auxillary subunit 332 51.65 0 368060..369031 + 323 170079995 secF ECDH10B_0365 - SecYEG protein translocase auxillary subunit 333 47.13 0 369160..369507 + 115 170079996 yajD ECDH10B_0366 - hypothetical protein 334 50.51 0 369684..370568 - 294 170079997 tsx ECDH10B_0367 - nucleoside channel, receptor of phage T6 and colicin K 335 47.59 0 370867..371406 - 179 170079998 yajI ECDH10B_0368 - lipoprotein 336 51.33 0 371557..372006 + 149 170079999 nrdR ECDH10B_0369 - DNA-binding transcriptional regulator 337 55.34 0 372010..373113 + 367 170080000 ribD ECDH10B_0370 - fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase 338 52.23 0 373202..373672 + 156 170080001 ribE ECDH10B_0371 - riboflavin synthase beta chain 339 53.81 0 373692..374111 + 139 170080002 nusB ECDH10B_0372 - transcription antitermination protein 340 54.40 0 374189..375166 + 325 170080003 thiL ECDH10B_0373 - thiamin-monophosphate kinase 341 53.18 0 375144..375662 + 172 170080004 pgpA ECDH10B_0374 - phosphatidylglycerophosphatase A 342 53.03 0 375716..376690 - 324 170080005 yajO ECDH10B_0375 - oxidoreductase, NAD(P)-binding 343 54.27 0 376870..378732 - 620 170080006 dxs ECDH10B_0376 - 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring 344 54.22 0 378757..379656 - 299 170080007 ispA ECDH10B_0377 - geranyltranstransferase 345 55.14 0 379656..379898 - 80 170080008 xseB ECDH10B_0378 - exonuclease VII small subunit 346 52.17 0 380104..381552 + 482 170080009 thiI ECDH10B_0379 - sulfurtransferase required for thiamine and 4-thiouridine biosynthesis 347 56.51 +1 381606..382196 - 196 170080010 yajL ECDH10B_0380 - hypothetical protein 348 51.86 0 382159..383070 - 303 170080011 panE ECDH10B_0381 - 2-dehydropantoate reductase, NADPH-specific 349 50.00 0 383238..383729 + 163 170080012 yajQ ECDH10B_0382 - nucleotide binding protein 350 52.60 0 383857..385221 - 454 170080013 yajR ECDH10B_0383 - transporter 351 53.76 0 385370..386260 - 296 170080014 cyoE ECDH10B_0384 - protoheme IX farnesyltransferase 352 49.70 0 386272..386601 - 109 170080015 cyoD ECDH10B_0385 - cytochrome o ubiquinol oxidase subunit IV 353 53.50 0 386601..387215 - 204 170080016 cyoC ECDH10B_0386 - cytochrome o ubiquinol oxidase subunit III 354 52.96 0 387205..389196 - 663 170080017 cyoB ECDH10B_0387 - cytochrome o ubiquinol oxidase subunit I 355 50.95 0 389218..390165 - 315 170080018 cyoA ECDH10B_0388 - cytochrome o ubiquinol oxidase subunit II 356 53.66 0 390625..392100 - 491 170080019 ampG ECDH10B_0389 - muropeptide transporter 357 51.30 0 392144..392722 - 192 170080020 yajG ECDH10B_0390 - lipoprotein 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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