version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2995 42.17 -1 3361894..3362832 - 312 170082658 tdcA ECDH10B_3292 - DNA-binding transcriptional activator 2996 28.77 -2 3363147..3363365 + 72 170082659 tdcR ECDH10B_3293 - DNA-binding transcriptional activator 2997 35.56 -2 3363621..3364160 + 179 170082660 yhaB ECDH10B_3294 - hypothetical protein 2998 31.82 -2 3364182..3365369 + 395 170082661 yhaC ECDH10B_3295 - hypothetical protein 2999 53.87 0 3366392..3367618 - 408 170082662 garK ECDH10B_3297 - glycerate kinase I 3000 52.86 0 3367634..3368524 - 296 170082663 garR ECDH10B_3298 - tartronate semialdehyde reductase 3001 52.92 0 3368554..3369324 - 256 170082664 garL ECDH10B_3299 - alpha-dehydro-beta-deoxy-D-glucarate aldolase 3002 51.31 0 3369340..3370674 - 444 170082665 garP ECDH10B_3300 - (D)-galactarate transporter 3003 52.86 0 3371049..3372620 + 523 170082666 garD ECDH10B_3301 - (D)-galactarate dehydrogenase 3004 47.62 0 3372769..3373104 + 111 170082667 sohA ECDH10B_3302 - regulator 3005 43.87 -1 3373104..3373568 + 154 170082668 yhaV ECDH10B_3303 - hypothetical protein 3006 52.22 0 3373623..3374432 - 269 170082669 agaR ECDH10B_3304 - DNA-binding transcriptional dual regulator 3007 55.27 0 3374681..3375961 + 426 170082670 kbaZ ECDH10B_3305 - tagatose 6-phosphate aldolase 1, kbaZ subunit 3008 50.63 0 3375984..3376457 + 157 170082671 agaV ECDH10B_3306 - N-acetylgalactosamine-specific enzyme IIB component of PTS 3009 56.94 +1 3376889..3377392 + 167 170082672 agaA ECDH10B_3308 - hypothetical protein 3010 56.62 +1 3377743..3378897 + 384 170082673 agaS ECDH10B_3309 - tagatose-6-phosphate ketose/aldose isomerase 3011 52.03 0 3378910..3379770 + 286 170082674 kbaY ECDH10B_3310 - tagatose 6-phosphate aldolase 1, kbaY subunit 3012 44.03 -1 3379937..3380413 + 158 170082675 agaB ECDH10B_3311 - N-acetylgalactosamine-specific enzyme IIB component of PTS 3013 51.37 0 3380452..3381255 + 267 170082676 agaC ECDH10B_3312 - N-acetylgalactosamine-specific enzyme IIC component of PTS 3014 49.37 0 3381245..3382036 + 263 170082677 agaD ECDH10B_3313 - N-acetylgalactosamine-specific enzyme IID component of PTS 3015 50.26 0 3382037..3382792 + 251 170082678 agaI ECDH10B_3314 - galactosamine-6-phosphate isomerase 3016 45.13 -1 3383193..3383777 + 194 170082679 yraH ECDH10B_3315 - fimbrial-like adhesin protein 3017 44.25 -1 3383857..3384552 + 231 170082680 yraI ECDH10B_3316 - periplasmic pilin chaperone 3018 47.60 0 3384581..3387097 + 838 170082681 yraJ ECDH10B_3317 - outer membrane protein 3019 47.89 0 3387108..3388199 + 363 170082682 yraK ECDH10B_3318 - fimbrial-like adhesin protein 3020 54.59 0 3388242..3389102 - 286 170082683 yraL ECDH10B_3319 - methyltransferase 3021 54.05 0 3389167..3391203 + 678 170082684 yraM ECDH10B_3320 - hypothetical protein 3022 54.55 0 3391161..3391556 + 131 170082685 yraN ECDH10B_3321 - hypothetical protein 3023 50.25 0 3391576..3392166 + 196 170082686 diaA ECDH10B_3322 - DnaA initiator-associating factor 3024 54.34 0 3392176..3392751 + 191 170082687 yraP ECDH10B_3323 - hypothetical protein 3025 57.73 +1 3392865..3393905 - 346 170082688 yraQ ECDH10B_3324 - permease 3026 54.87 0 3393978..3394613 - 211 170082689 yraR ECDH10B_3325 - nucleoside-diphosphate-sugar epimerase 3027 50.29 0 3394741..3395259 + 172 170082690 yhbO ECDH10B_3326 - intracellular protease 3028 53.83 0 3395239..3395682 - 147 170082691 yhbP ECDH10B_3327 - hypothetical protein 3029 54.46 0 3395733..3396035 + 100 170082692 yhbQ ECDH10B_3328 - endonuclease 3030 55.56 0 3396022..3396525 - 167 170082693 yhbS ECDH10B_3329 - acyltransferase 3031 51.81 0 3396519..3397043 - 174 170082694 yhbT ECDH10B_3330 - lipid carrier protein 3032 56.83 +1 3397252..3398247 + 331 170082695 yhbU ECDH10B_3331 - peptidase (collagenase-like) 3033 55.97 +1 3398256..3399134 + 292 170082696 yhbV ECDH10B_3332 - protease 3034 55.85 0 3399215..3400222 + 335 170082697 yhbW ECDH10B_3333 - hypothetical protein 3035 53.09 0 3400340..3401584 - 414 170082698 mtr ECDH10B_3334 - tryptophan transporter of high affinity 3036 55.56 0 3401738..3403627 - 629 170082699 deaD ECDH10B_3335 - ATP-dependent RNA helicase 3037 48.25 0 3403807..3404691 - 294 170082700 nlpI ECDH10B_3336 - hypothetical protein 3038 53.70 0 3404800..3407004 - 734 170082701 pnp ECDH10B_3337 - polynucleotide phosphorylase/polyadenylase 3039 51.85 0 3407182..3407451 - 89 170082702 rpsO ECDH10B_3339 - 30S ribosomal subunit protein S15 3040 52.49 0 3407600..3408544 - 314 170082703 truB ECDH10B_3340 - tRNA U55 pseudouridine synthase 3041 52.99 0 3408544..3408945 - 133 170082704 rbfA ECDH10B_3341 - 30s ribosome binding factor 3042 53.42 0 3409109..3411781 - 890 170082705 infB ECDH10B_3342 - fused protein chain initiation factor 2, IF2: membrane protein; protein 3043 52.76 0 3411806..3413293 - 495 170082706 nusA ECDH10B_3343 - transcription termination/antitermination L factor 3044 48.57 0 3413321..3413773 - 150 170082707 yhbC ECDH10B_3344 - hypothetical protein 3045 52.60 0 3414404..3415747 + 447 170082708 argG ECDH10B_3346 - argininosuccinate synthetase 3046 43.05 -1 3415755..3417380 - 541 170082709 yhbX ECDH10B_3347 - hydrolase, inner membrane 3047 49.55 0 3417940..3418272 - 110 170082710 secG ECDH10B_3349 - preprotein translocase membrane subunit 3048 54.41 0 3418500..3419837 - 445 170082711 glmM ECDH10B_3350 - phosphoglucosamine mutase 3049 51.59 0 3419830..3420678 - 282 170082712 folP ECDH10B_3351 - 7,8-dihydropteroate synthase 3050 53.59 0 3420768..3422702 - 644 170082713 ftsH ECDH10B_3352 - subunit of integral membrane ATP-dependent zinc metallopeptidase 3051 50.48 0 3422802..3423431 - 209 170082714 rrmJ ECDH10B_3353 - 23S rRNA methyltransferase 3052 48.64 0 3423557..3423850 + 97 170082715 yhbY ECDH10B_3354 - RNA-binding protein 3053 48.43 0 3424006..3424482 - 158 170082716 greA ECDH10B_3355 - transcription elongation factor 3054 53.14 0 3424730..3426163 + 477 170082717 dacB ECDH10B_3356 - D-alanyl-D-alanine carboxypeptidase 3055 53.20 0 3426349..3427521 - 390 170082718 obgE ECDH10B_3357 - GTPase involved in cell partioning and DNA repair 3056 53.00 0 3427537..3428502 - 321 170082719 yhbE ECDH10B_3358 - inner membrane protein 3057 50.00 0 3428629..3428886 - 85 170082720 rpmA ECDH10B_3359 - 50S ribosomal subunit protein L27 3058 48.40 0 3428907..3429218 - 103 170082721 rplU ECDH10B_3360 - 50S ribosomal subunit protein L21 3059 52.67 0 3429477..3430448 + 323 170082722 ispB ECDH10B_3361 - octaprenyl diphosphate synthase 3060 50.18 0 3430676..3430954 + 92 170082723 sfsB ECDH10B_3362 - DNA-binding transcriptional activator of maltose metabolism 3061 50.59 0 3432316..3432570 - 84 170082724 yrbA ECDH10B_3364 - DNA-binding transcriptional regulator 3062 53.40 0 3432730..3433023 - 97 170082725 yrbB ECDH10B_3365 - hypothetical protein 3063 52.36 0 3433023..3433658 - 211 170082726 yrbC ECDH10B_3366 - organic solvent ABC transporter 3064 49.82 0 3433677..3434228 - 183 170082727 yrbD ECDH10B_3367 - organic solvent ABC transporter 3065 55.17 0 3434233..3435015 - 260 170082728 yrbE ECDH10B_3368 - toluene ABC transporter membrane protein 3066 54.57 0 3435023..3435832 - 269 170082729 yrbF ECDH10B_3369 - toluene ABC transporter ATP-binding protein 3067 52.04 0 3436042..3437019 + 325 170082730 yrbG ECDH10B_3370 - calcium/sodium:proton antiporter 3068 51.87 0 3437033..3438019 + 328 170082731 kdsD ECDH10B_3371 - D-arabinose 5-phosphate isomerase 3069 52.56 0 3438040..3438606 + 188 170082732 kdsC ECDH10B_3372 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3070 46.35 -1 3438603..3439178 + 191 170082733 yrbK ECDH10B_3373 - hypothetical protein 3071 49.64 0 3439147..3439704 + 185 170082734 yhbN ECDH10B_3374 - ABC transporter periplasmic-binding protein 3072 54.41 0 3439711..3440436 + 241 170082735 yhbG ECDH10B_3375 - ABC transporter ATP-binding protein 3073 52.86 0 3440484..3441917 + 477 170082736 rpoN ECDH10B_3376 - RNA polymerase, sigma 54 (sigma N) factor 3074 44.79 -1 3441940..3442227 + 95 170082737 hpf ECDH10B_3377 - ribosomal hibernation promoting factor 3075 52.24 0 3442345..3442836 + 163 170082738 ptsN ECDH10B_3378 - sugar-specific enzyme IIA component of PTS 3076 52.16 0 3442882..3443736 + 284 170082739 yhbJ ECDH10B_3379 - nucleoside triphosphate hydrolase domain-containing protein 3077 49.08 0 3443733..3444005 + 90 170082740 npr ECDH10B_3380 - phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 3078 51.18 0 3444219..3444851 + 210 170082741 yrbL ECDH10B_3381 - hypothetical protein 3079 51.99 0 3444848..3445576 - 242 170082742 mtgA ECDH10B_3382 - biosynthetic peptidoglycan transglycosylase 3080 52.75 0 3445573..3446226 - 217 170082743 elbB ECDH10B_3383 - isoprenoid biosynthesis protein 3081 50.62 0 3446456..3448792 - 778 170082744 arcB ECDH10B_3385 - hybrid sensory histidine kinase in two-component regulatory system with ArcA 3082 56.02 +1 3448888..3449817 - 309 170082745 yhcC ECDH10B_3386 - Fe-S oxidoreductase 3083 57.05 +1 3450399..3454952 + 1517 170082746 gltB ECDH10B_3387 - glutamate synthase, large subunit 3084 56.17 +1 3454965..3456383 + 472 170082747 gltD ECDH10B_3388 - glutamate synthase, 4Fe-4S protein, small subunit 3085 45.36 -1 3456943..3457707 + 254 170082748 gltF ECDH10B_3389 - periplasmic protein 3086 41.63 -1 3457879..3458553 + 224 170082749 yhcA ECDH10B_3390 - periplasmic chaperone protein 3087 45.51 -1 3458574..3460955 + 793 170082750 yhcD ECDH10B_3391 - outer membrane protein 3088 54.67 0 3461469..3462485 - 338 170082751 insH-10 ECDH10B_3394 - IS5 transposase and trans-activator 3089 43.51 -1 3462693..3463409 + 238 170082752 yhcF ECDH10B_3396 - transcriptional regulator 3090 47.31 0 3464781..3465245 - 154 170082753 yhcH ECDH10B_3398 - hypothetical protein 3091 58.45 +1 3465242..3466117 - 291 170082754 nanK ECDH10B_3399 - N-acetylmannosamine kinase 3092 58.26 +1 3466114..3466803 - 229 170082755 nanE ECDH10B_3400 - N-acetylmannosamine-6-P epimerase 3093 55.06 0 3466851..3468341 - 496 170082756 nanT ECDH10B_3401 - sialic acid transporter 3094 52.01 0 3468450..3469343 - 297 170082757 nanA ECDH10B_3402 - N-acetylneuraminate lyase 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0