version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2466 56.72 +1 2734800..2737112 - 770 170082129 pbpC ECDH10B_2685 - fused transglycosylase; transpeptidase 2467 52.96 0 2737113..2742074 - 1653 170082130 yfhM ECDH10B_2686 - hypothetical protein 2468 53.19 0 2742281..2743126 + 281 170082131 sseA ECDH10B_2687 - 3-mercaptopyruvate sulfurtransferase 2469 47.10 0 2743944..2744720 - 258 170082132 sseB ECDH10B_2689 - rhodanase-like enzyme, sulfur transfer from thiosulfate 2470 56.85 +1 2744862..2746145 - 427 170082133 pepB ECDH10B_2690 - aminopeptidase B 2471 50.25 0 2746323..2746523 - 66 170082134 yfhJ ECDH10B_2691 - hypothetical protein 2472 51.79 0 2746535..2746870 - 111 170082135 fdx ECDH10B_2692 - [2Fe-2S] ferredoxin 2473 57.70 +1 2746872..2748722 - 616 170082136 hscA ECDH10B_2693 - DnaK-like molecular chaperone specific for IscU 2474 52.33 0 2748739..2749254 - 171 170082137 hscB ECDH10B_2694 - DnaJ-like molecular chaperone specific for IscU 2475 51.54 0 2749350..2749673 - 107 170082138 iscA ECDH10B_2695 - FeS cluster assembly protein 2476 50.13 0 2749690..2750076 - 128 170082139 iscU ECDH10B_2696 - scaffold protein 2477 53.33 0 2750104..2751318 - 404 170082140 iscS ECDH10B_2697 - cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent 2478 53.58 0 2751430..2751918 - 162 170082141 iscR ECDH10B_2698 - Fe-S cluster-containing transcription factor 2479 55.47 0 2752370..2753110 - 246 170082142 yfhQ ECDH10B_2699 - methyltransferase 2480 54.48 0 2753229..2754032 + 267 170082143 suhB ECDH10B_2700 - inositol monophosphatase 2481 50.11 0 2754150..2755031 + 293 170082144 yfhR ECDH10B_2701 - peptidase 2482 51.52 0 2755222..2756502 + 426 170082145 csiE ECDH10B_2702 - stationary phase inducible protein 2483 56.49 +1 2756494..2757633 - 379 170082146 hcaT ECDH10B_2703 - 3-phenylpropionic transporter 2484 49.83 0 2757793..2758683 - 296 170082147 hcaR ECDH10B_2704 - DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism 2485 52.94 0 2758819..2760180 + 453 170082148 hcaE ECDH10B_2705 - 3-phenylpropionate dioxygenase, large (alpha) subunit 2486 52.22 0 2760177..2760695 + 172 170082149 hcaF ECDH10B_2706 - 3-phenylpropionate dioxygenase, small (beta) subunit 2487 55.45 0 2760695..2761015 + 106 170082150 hcaC ECDH10B_2707 - 3-phenylpropionate dioxygenase ferredoxin subunit 2488 56.09 +1 2761012..2761824 + 270 170082151 hcaB ECDH10B_2708 - 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2489 54.03 0 2761834..2763036 + 400 170082152 hcaD ECDH10B_2709 - phenylpropionate dioxygenase, ferredoxin reductase subunit 2490 49.09 0 2763061..2763555 + 164 170082153 yphA ECDH10B_2710 - inner membrane protein 2491 55.21 0 2763603..2764475 - 290 170082154 yphB ECDH10B_2711 - hypothetical protein 2492 55.18 0 2764487..2765548 - 353 170082155 yphC ECDH10B_2712 - oxidoreductase, Zn-dependent and NAD(P)-binding 2493 56.16 +1 2765614..2766612 - 332 170082156 yphD ECDH10B_2713 - sugar ABC transporter membrane protein 2494 56.08 +1 2766637..2768148 - 503 170082157 yphE ECDH10B_2714 - sugar ABC transporter ATP-binding protein 2495 46.14 -1 2768171..2769154 - 327 170082158 yphF ECDH10B_2715 - sugar ABC transporter periplasmic-binding protein 2496 54.88 0 2769251..2772532 - 1093 170082159 yphG ECDH10B_2716 - hypothetical protein 2497 50.59 0 2772650..2773843 + 397 170082160 yphH ECDH10B_2717 - DNA-binding transcriptional regulator 2498 53.35 0 2774041..2775294 - 417 170082161 glyA ECDH10B_2718 - serine hydroxymethyltransferase 2499 52.48 0 2775622..2776812 + 396 170082162 hmp ECDH10B_2719 - fused nitric oxide dioxygenase; dihydropteridine reductase 2 2500 51.03 0 2776857..2777195 - 112 170082163 glnB ECDH10B_2720 - regulatory protein P-II for glutamine synthetase 2501 54.76 0 2777256..2778590 - 444 170082164 yfhA ECDH10B_2721 - DNA-binding response regulator in two-component system 2502 54.20 0 2778580..2779293 - 237 170082165 yfhG ECDH10B_2722 - hypothetical protein 2503 53.15 0 2779458..2780885 - 475 170082166 yfhK ECDH10B_2723 - sensory kinase in two-component system 2504 56.89 +1 2781443..2785330 - 1295 170082167 purL ECDH10B_2725 - phosphoribosylformyl-glycineamide synthetase 2505 50.39 0 2785726..2787144 + 472 170082168 yfhD ECDH10B_2726 - transglycosylase 2506 54.76 0 2787141..2787644 - 167 170082169 tadA ECDH10B_2727 - tRNA-specific adenosine deaminase 2507 52.20 0 2787702..2788337 - 211 170082170 yfhB ECDH10B_2728 - hypothetical protein 2508 51.71 0 2788546..2789394 + 282 170082171 yfhH ECDH10B_2729 - DNA-binding transcriptional regulator 2509 44.83 -1 2789450..2789710 + 86 170082172 yfhL ECDH10B_2730 - 4Fe-4S cluster-containing protein 2510 56.42 +1 2790785..2791516 - 243 170082173 pdxJ ECDH10B_2732 - pyridoxine 5'-phosphate synthase 2511 54.05 0 2791528..2792256 - 242 170082174 recO ECDH10B_2733 - gap repair protein 2512 52.32 0 2792268..2793173 - 301 170082175 era ECDH10B_2734 - membrane-associated, 16S rRNA-binding GTPase 2513 50.66 0 2793170..2793850 - 226 170082176 rnc ECDH10B_2735 - RNase III 2514 52.00 0 2794122..2795096 - 324 170082177 lepB ECDH10B_2736 - leader peptidase (signal peptidase I) 2515 53.72 0 2795112..2796911 - 599 170082178 lepA ECDH10B_2737 - GTP-binding membrane protein 2516 54.79 0 2797109..2797588 - 159 170082179 rseC ECDH10B_2738 - RseC 2517 50.78 0 2797585..2798541 - 318 170082180 rseB ECDH10B_2739 - anti-sigma factor 2518 52.23 0 2798541..2799191 - 216 170082181 rseA ECDH10B_2740 - anti-sigma factor 2519 48.78 0 2799224..2799799 - 191 170082182 rpoE ECDH10B_2741 - RNA polymerase, sigma 24 (sigma E) factor 2520 53.17 0 2800207..2801829 + 540 170082183 nadB ECDH10B_2742 - quinolinate synthase, L-aspartate oxidase (B protein) subunit 2521 52.44 0 2801814..2802551 - 245 170082184 yfiC ECDH10B_2743 - S-adenosyl-L-methionine-dependent methyltransferase 2522 54.76 0 2802683..2804017 + 444 170082185 srmB ECDH10B_2744 - ATP-dependent RNA helicase 2523 49.66 0 2804226..2805107 - 293 170082186 yfiE ECDH10B_2745 - DNA-binding transcriptional regulator 2524 51.19 0 2805210..2805797 + 195 170082187 yfiK ECDH10B_2746 - neutral amino-acid efflux system 2525 47.92 0 2805853..2806236 - 127 170082188 yfiD ECDH10B_2747 - pyruvate formate lyase subunit 2526 52.17 0 2806541..2807230 + 229 170082189 ung ECDH10B_2748 - uracil-DNA-glycosylase 2527 56.26 +1 2807278..2808315 - 345 170082190 yfiF ECDH10B_2749 - methyltransferase 2528 49.52 0 2808522..2808941 + 139 170082191 trxC ECDH10B_2750 - thioredoxin 2 2529 52.36 0 2809010..2809708 + 232 170082192 yfiP ECDH10B_2751 - hypothetical protein 2530 54.30 0 2809740..2812400 + 886 170082193 yfiQ ECDH10B_2752 - fused acyl-CoA synthetase: NAD(P)-binding subunit; ATP-binding subunit 2531 48.89 0 2812514..2813869 + 451 170082194 pssA ECDH10B_2753 - phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) 2532 56.41 +1 2813966..2814238 + 90 170082195 yfiM ECDH10B_2754 - hypothetical protein 2533 48.73 0 2814235..2815533 - 432 170082196 kgtP ECDH10B_2755 - alpha-ketoglutarate transporter 2534 51.44 0 2821387..2823960 - 857 170082197 clpB ECDH10B_2760 - protein disaggregation chaperone 2535 54.78 0 2824090..2824821 - 243 170082198 yfiH ECDH10B_2761 - hypothetical protein 2536 52.80 0 2824818..2825798 - 326 170082199 rluD ECDH10B_2762 - 23S rRNA pseudouridine synthase 2537 51.22 0 2825933..2826670 + 245 170082200 yfiO ECDH10B_2763 - lipoprotein 2538 46.20 -1 2826941..2827282 + 113 170082201 yfiA ECDH10B_2764 - cold shock protein associated with 30S ribosomal subunit 2539 37.50 -2 2827386..2827433 + 15 170082202 pheL ECDH10B_2765 - pheA gene leader peptide 2540 49.18 0 2827532..2828692 + 386 170082203 pheA ECDH10B_2766 - bifunctional chorismate mutase P and prephenate dehydratase 2541 52.32 0 2828735..2829856 - 373 170082204 tyrA ECDH10B_2767 - bifunctional chorismate mutase T and prephenate dehydrogenase 2542 51.82 0 2829867..2830937 - 356 170082205 aroF ECDH10B_2768 - 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible 2543 45.63 -1 2831147..2831512 + 121 170082206 yfiL ECDH10B_2769 - hypothetical protein 2544 45.66 -1 2831662..2832180 + 172 170082207 yfiR ECDH10B_2770 - hypothetical protein 2545 48.33 0 2832170..2833396 + 408 170082208 yfiN ECDH10B_2771 - diguanylate cyclase 2546 51.14 0 2833412..2833894 + 160 170082209 yfiB ECDH10B_2772 - outer membrane lipoprotein 2547 48.28 0 2833970..2834317 - 115 170082210 rplS ECDH10B_2773 - 50S ribosomal subunit protein L19 2548 53.39 0 2834359..2835126 - 255 170082211 trmD ECDH10B_2774 - tRNA (guanine-1-)-methyltransferase 2549 49.00 0 2835157..2835705 - 182 170082212 rimM ECDH10B_2775 - 16S rRNA processing protein 2550 51.41 0 2835724..2835972 - 82 170082213 rpsP ECDH10B_2776 - 30S ribosomal subunit protein S16 2551 54.19 0 2836221..2837582 - 453 170082214 ffh ECDH10B_2777 - Signal recognition particle (SRP) component with 4.5S RNA (ffs) 2552 51.13 0 2838561..2839847 + 428 170082215 yfjD ECDH10B_2779 - inner membrane protein 2553 50.34 0 2839902..2840495 - 197 170082216 grpE ECDH10B_2780 - heat shock protein 2554 49.94 0 2840618..2841496 + 292 170082217 yfjB ECDH10B_2781 - NAD kinase 2555 51.81 0 2841582..2843243 + 553 170082218 recN ECDH10B_2782 - recombination and repair protein 2556 49.42 0 2843392..2843733 + 113 170082219 smpA ECDH10B_2783 - small membrane lipoprotein 2557 50.86 0 2843795..2844085 - 96 170082220 yfjF ECDH10B_2784 - hypothetical protein 2558 47.17 0 2844075..2844551 - 158 170082221 yfjG ECDH10B_2785 - hypothetical protein 2559 51.76 0 2844683..2845165 + 160 170082222 smpB ECDH10B_2786 - trans-translation protein 2560 36.78 -2 2847431..2848387 - 318 170082223 yfjH ECDH10B_2789 - CP4-57 prophage; hypothetical protein 2561 46.95 0 2848431..2848643 + 70 170082224 alpA ECDH10B_2790 - CP4-57 prophage; DNA-binding transcriptional activator 2562 37.94 -2 2848772..2850181 + 469 170082225 yfjI ECDH10B_2791 - CP4-57 prophage; hypothetical protein 2563 40.35 -2 2850334..2850960 + 208 170082226 yfjJ ECDH10B_2792 - CP4-57 prophage; hypothetical protein 2564 48.90 0 2851138..2853327 - 729 170082227 yfjK ECDH10B_2793 - CP4-57 prophage; protein 2565 48.67 0 2853324..2854940 - 538 170082228 yfjL ECDH10B_2794 - CP4-57 prophage; hypothetical protein 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0