version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2437 52.66 0 2701244..2701657 + 137 170082100 hyfJ ECDH10B_2656 - processing element hydrogenase 4 2438 52.61 0 2701687..2703699 + 670 170082101 hyfR ECDH10B_2657 - DNA-binding transcriptional activator, formate sensing 2439 51.24 0 2703721..2704569 + 282 170082102 focB ECDH10B_2658 - formate transporter 2440 54.14 0 2704607..2705668 - 353 170082103 yfgO ECDH10B_2659 - inner membrane protein 2441 53.89 0 2705881..2707344 + 487 170082104 yfgC ECDH10B_2660 - peptidase 2442 52.50 0 2707365..2707724 + 119 170082105 yfgD ECDH10B_2661 - oxidoreductase 2443 53.15 0 2707862..2708608 - 248 170082106 hda ECDH10B_2662 - ATPase regulatory factor involved in DnaA inactivation 2444 51.94 0 2708658..2709947 - 429 170082107 uraA ECDH10B_2663 - uracil transporter 2445 52.95 0 2710033..2710659 - 208 170082108 upp ECDH10B_2664 - uracil phosphoribosyltransferase 2446 52.89 0 2710984..2712021 + 345 170082109 purM ECDH10B_2665 - phosphoribosylaminoimidazole synthetase 2447 53.68 0 2712021..2712659 + 212 170082110 purN ECDH10B_2666 - phosphoribosylglycinamide formyltransferase 1 2448 48.86 0 2712831..2714897 + 688 170082111 ppk ECDH10B_2667 - polyphosphate kinase, component of RNA degradosome 2449 51.17 0 2714902..2716443 + 513 170082112 ppx ECDH10B_2668 - exopolyphosphatase 2450 46.61 0 2716482..2718725 - 747 170082113 yfgF ECDH10B_2669 - inner membrane protein 2451 49.48 0 2719077..2719268 + 63 170082114 yfgG ECDH10B_2670 - hypothetical protein 2452 47.21 0 2719579..2720097 + 172 170082115 yfgH ECDH10B_2671 - outer membrane lipoprotein 2453 49.26 0 2720113..2720652 + 179 170082116 yfgI ECDH10B_2672 - hypothetical protein 2454 54.12 0 2720745..2722322 - 525 170082117 guaA ECDH10B_2673 - GMP synthetase (glutamine aminotransferase) 2455 54.67 0 2722391..2723857 - 488 170082118 guaB ECDH10B_2674 - IMP dehydrogenase 2456 53.25 0 2724019..2725389 + 456 170082119 xseA ECDH10B_2675 - exonuclease VII, large subunit 2457 47.69 0 2725386..2725601 - 71 170082120 yfgJ ECDH10B_2676 - hypothetical protein 2458 52.21 0 2725671..2727143 - 490 170082121 der ECDH10B_2677 - GTP-binding protein 2459 53.27 0 2727261..2728439 - 392 170082122 yfgL ECDH10B_2678 - protein assembly complex, lipoprotein component 2460 49.76 0 2728450..2729070 - 206 170082123 yfgM ECDH10B_2679 - hypothetical protein 2461 54.75 0 2729088..2730362 - 424 170082124 hisS ECDH10B_2680 - histidyl tRNA synthetase 2462 53.26 0 2730473..2731591 - 372 170082125 ispG ECDH10B_2681 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 2463 54.54 0 2731618..2732631 - 337 170082126 yfgA ECDH10B_2682 - hypothetical protein 2464 52.99 0 2732916..2734070 - 384 170082127 yfgB ECDH10B_2683 - hypothetical protein 2465 52.31 0 2734220..2734651 - 143 170082128 ndk ECDH10B_2684 - multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase 2466 56.72 +1 2734800..2737112 - 770 170082129 pbpC ECDH10B_2685 - fused transglycosylase; transpeptidase 2467 52.96 0 2737113..2742074 - 1653 170082130 yfhM ECDH10B_2686 - hypothetical protein 2468 53.19 0 2742281..2743126 + 281 170082131 sseA ECDH10B_2687 - 3-mercaptopyruvate sulfurtransferase 2469 47.10 0 2743944..2744720 - 258 170082132 sseB ECDH10B_2689 - rhodanase-like enzyme, sulfur transfer from thiosulfate 2470 56.85 +1 2744862..2746145 - 427 170082133 pepB ECDH10B_2690 - aminopeptidase B 2471 50.25 0 2746323..2746523 - 66 170082134 yfhJ ECDH10B_2691 - hypothetical protein 2472 51.79 0 2746535..2746870 - 111 170082135 fdx ECDH10B_2692 - [2Fe-2S] ferredoxin 2473 57.70 +1 2746872..2748722 - 616 170082136 hscA ECDH10B_2693 - DnaK-like molecular chaperone specific for IscU 2474 52.33 0 2748739..2749254 - 171 170082137 hscB ECDH10B_2694 - DnaJ-like molecular chaperone specific for IscU 2475 51.54 0 2749350..2749673 - 107 170082138 iscA ECDH10B_2695 - FeS cluster assembly protein 2476 50.13 0 2749690..2750076 - 128 170082139 iscU ECDH10B_2696 - scaffold protein 2477 53.33 0 2750104..2751318 - 404 170082140 iscS ECDH10B_2697 - cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent 2478 53.58 0 2751430..2751918 - 162 170082141 iscR ECDH10B_2698 - Fe-S cluster-containing transcription factor 2479 55.47 0 2752370..2753110 - 246 170082142 yfhQ ECDH10B_2699 - methyltransferase 2480 54.48 0 2753229..2754032 + 267 170082143 suhB ECDH10B_2700 - inositol monophosphatase 2481 50.11 0 2754150..2755031 + 293 170082144 yfhR ECDH10B_2701 - peptidase 2482 51.52 0 2755222..2756502 + 426 170082145 csiE ECDH10B_2702 - stationary phase inducible protein 2483 56.49 +1 2756494..2757633 - 379 170082146 hcaT ECDH10B_2703 - 3-phenylpropionic transporter 2484 49.83 0 2757793..2758683 - 296 170082147 hcaR ECDH10B_2704 - DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism 2485 52.94 0 2758819..2760180 + 453 170082148 hcaE ECDH10B_2705 - 3-phenylpropionate dioxygenase, large (alpha) subunit 2486 52.22 0 2760177..2760695 + 172 170082149 hcaF ECDH10B_2706 - 3-phenylpropionate dioxygenase, small (beta) subunit 2487 55.45 0 2760695..2761015 + 106 170082150 hcaC ECDH10B_2707 - 3-phenylpropionate dioxygenase ferredoxin subunit 2488 56.09 +1 2761012..2761824 + 270 170082151 hcaB ECDH10B_2708 - 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2489 54.03 0 2761834..2763036 + 400 170082152 hcaD ECDH10B_2709 - phenylpropionate dioxygenase, ferredoxin reductase subunit 2490 49.09 0 2763061..2763555 + 164 170082153 yphA ECDH10B_2710 - inner membrane protein 2491 55.21 0 2763603..2764475 - 290 170082154 yphB ECDH10B_2711 - hypothetical protein 2492 55.18 0 2764487..2765548 - 353 170082155 yphC ECDH10B_2712 - oxidoreductase, Zn-dependent and NAD(P)-binding 2493 56.16 +1 2765614..2766612 - 332 170082156 yphD ECDH10B_2713 - sugar ABC transporter membrane protein 2494 56.08 +1 2766637..2768148 - 503 170082157 yphE ECDH10B_2714 - sugar ABC transporter ATP-binding protein 2495 46.14 -1 2768171..2769154 - 327 170082158 yphF ECDH10B_2715 - sugar ABC transporter periplasmic-binding protein 2496 54.88 0 2769251..2772532 - 1093 170082159 yphG ECDH10B_2716 - hypothetical protein 2497 50.59 0 2772650..2773843 + 397 170082160 yphH ECDH10B_2717 - DNA-binding transcriptional regulator 2498 53.35 0 2774041..2775294 - 417 170082161 glyA ECDH10B_2718 - serine hydroxymethyltransferase 2499 52.48 0 2775622..2776812 + 396 170082162 hmp ECDH10B_2719 - fused nitric oxide dioxygenase; dihydropteridine reductase 2 2500 51.03 0 2776857..2777195 - 112 170082163 glnB ECDH10B_2720 - regulatory protein P-II for glutamine synthetase 2501 54.76 0 2777256..2778590 - 444 170082164 yfhA ECDH10B_2721 - DNA-binding response regulator in two-component system 2502 54.20 0 2778580..2779293 - 237 170082165 yfhG ECDH10B_2722 - hypothetical protein 2503 53.15 0 2779458..2780885 - 475 170082166 yfhK ECDH10B_2723 - sensory kinase in two-component system 2504 56.89 +1 2781443..2785330 - 1295 170082167 purL ECDH10B_2725 - phosphoribosylformyl-glycineamide synthetase 2505 50.39 0 2785726..2787144 + 472 170082168 yfhD ECDH10B_2726 - transglycosylase 2506 54.76 0 2787141..2787644 - 167 170082169 tadA ECDH10B_2727 - tRNA-specific adenosine deaminase 2507 52.20 0 2787702..2788337 - 211 170082170 yfhB ECDH10B_2728 - hypothetical protein 2508 51.71 0 2788546..2789394 + 282 170082171 yfhH ECDH10B_2729 - DNA-binding transcriptional regulator 2509 44.83 -1 2789450..2789710 + 86 170082172 yfhL ECDH10B_2730 - 4Fe-4S cluster-containing protein 2510 56.42 +1 2790785..2791516 - 243 170082173 pdxJ ECDH10B_2732 - pyridoxine 5'-phosphate synthase 2511 54.05 0 2791528..2792256 - 242 170082174 recO ECDH10B_2733 - gap repair protein 2512 52.32 0 2792268..2793173 - 301 170082175 era ECDH10B_2734 - membrane-associated, 16S rRNA-binding GTPase 2513 50.66 0 2793170..2793850 - 226 170082176 rnc ECDH10B_2735 - RNase III 2514 52.00 0 2794122..2795096 - 324 170082177 lepB ECDH10B_2736 - leader peptidase (signal peptidase I) 2515 53.72 0 2795112..2796911 - 599 170082178 lepA ECDH10B_2737 - GTP-binding membrane protein 2516 54.79 0 2797109..2797588 - 159 170082179 rseC ECDH10B_2738 - RseC 2517 50.78 0 2797585..2798541 - 318 170082180 rseB ECDH10B_2739 - anti-sigma factor 2518 52.23 0 2798541..2799191 - 216 170082181 rseA ECDH10B_2740 - anti-sigma factor 2519 48.78 0 2799224..2799799 - 191 170082182 rpoE ECDH10B_2741 - RNA polymerase, sigma 24 (sigma E) factor 2520 53.17 0 2800207..2801829 + 540 170082183 nadB ECDH10B_2742 - quinolinate synthase, L-aspartate oxidase (B protein) subunit 2521 52.44 0 2801814..2802551 - 245 170082184 yfiC ECDH10B_2743 - S-adenosyl-L-methionine-dependent methyltransferase 2522 54.76 0 2802683..2804017 + 444 170082185 srmB ECDH10B_2744 - ATP-dependent RNA helicase 2523 49.66 0 2804226..2805107 - 293 170082186 yfiE ECDH10B_2745 - DNA-binding transcriptional regulator 2524 51.19 0 2805210..2805797 + 195 170082187 yfiK ECDH10B_2746 - neutral amino-acid efflux system 2525 47.92 0 2805853..2806236 - 127 170082188 yfiD ECDH10B_2747 - pyruvate formate lyase subunit 2526 52.17 0 2806541..2807230 + 229 170082189 ung ECDH10B_2748 - uracil-DNA-glycosylase 2527 56.26 +1 2807278..2808315 - 345 170082190 yfiF ECDH10B_2749 - methyltransferase 2528 49.52 0 2808522..2808941 + 139 170082191 trxC ECDH10B_2750 - thioredoxin 2 2529 52.36 0 2809010..2809708 + 232 170082192 yfiP ECDH10B_2751 - hypothetical protein 2530 54.30 0 2809740..2812400 + 886 170082193 yfiQ ECDH10B_2752 - fused acyl-CoA synthetase: NAD(P)-binding subunit; ATP-binding subunit 2531 48.89 0 2812514..2813869 + 451 170082194 pssA ECDH10B_2753 - phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) 2532 56.41 +1 2813966..2814238 + 90 170082195 yfiM ECDH10B_2754 - hypothetical protein 2533 48.73 0 2814235..2815533 - 432 170082196 kgtP ECDH10B_2755 - alpha-ketoglutarate transporter 2534 51.44 0 2821387..2823960 - 857 170082197 clpB ECDH10B_2760 - protein disaggregation chaperone 2535 54.78 0 2824090..2824821 - 243 170082198 yfiH ECDH10B_2761 - hypothetical protein 2536 52.80 0 2824818..2825798 - 326 170082199 rluD ECDH10B_2762 - 23S rRNA pseudouridine synthase 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0