version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2404 58.21 +1 2662276..2663292 - 338 170082067 eutI ECDH10B_2623 - phosphotransacetylase subunit 2405 58.58 +1 2663289..2664092 - 267 170082068 eutT ECDH10B_2624 - cobalamin adenosyltransferase in ethanolamine utilization 2406 55.98 +1 2664089..2664790 - 233 170082069 eutQ ECDH10B_2625 - hypothetical protein 2407 49.79 0 2664765..2665244 - 159 170082070 eutP ECDH10B_2626 - hypothetical protein 2408 50.60 0 2665257..2665592 - 111 170082071 ypfE ECDH10B_2627 - carboxysome structural protein with role in ethanol utilization 2409 54.12 0 2665885..2668164 - 759 170082072 maeB ECDH10B_2628 - fused malic enzyme oxidoreductase; phosphotransacetylase 2410 50.26 0 2668453..2669403 + 316 170082073 talA ECDH10B_2629 - transaldolase A 2411 54.64 0 2669423..2671426 + 667 170082074 tktB ECDH10B_2630 - transketolase 2, thiamin-binding 2412 54.60 0 2671521..2672564 - 347 170082075 ypfG ECDH10B_2631 - hypothetical protein 2413 48.61 0 2672690..2673265 - 191 170082076 yffH ECDH10B_2632 - NUDIX hydrolase 2414 55.71 0 2673333..2675312 - 659 170082077 aegA ECDH10B_2633 - fused oxidoreductase: FeS binding subunit; NAD/FAD-binding subunit 2415 51.62 0 2675518..2677218 + 566 170082078 narQ ECDH10B_2634 - sensory histidine kinase in two-component regulatory system with NarP (NarL) 2416 54.46 0 2677382..2680495 + 1037 170082079 acrD ECDH10B_2635 - aminoglycoside/multidrug efflux system 2417 46.78 0 2681034..2681390 + 118 170082080 yffB ECDH10B_2636 - hypothetical protein 2418 53.46 0 2681394..2682521 + 375 170082081 dapE ECDH10B_2637 - N-succinyl-diaminopimelate deacylase 2419 48.26 0 2682549..2682749 + 66 170082082 ypfN ECDH10B_2638 - hypothetical protein 2420 53.93 0 2682859..2683557 - 232 170082083 ypfH ECDH10B_2639 - hydrolase 2421 55.26 0 2683631..2685646 - 671 170082084 ypfI ECDH10B_2640 - hydrolase 2422 53.59 0 2685661..2686524 - 287 170082085 ypfJ ECDH10B_2641 - hypothetical protein 2423 52.24 0 2686692..2687405 - 237 170082086 purC ECDH10B_2642 - phosphoribosylaminoimidazole-succinocarboxamide synthetase 2424 55.46 0 2687618..2688652 - 344 170082087 nlpB ECDH10B_2643 - lipoprotein 2425 51.76 0 2688669..2689547 - 292 170082088 dapA ECDH10B_2644 - dihydrodipicolinate synthase 2426 50.09 0 2689693..2690265 + 190 170082089 gcvR ECDH10B_2645 - DNA-binding transcriptional repressor, regulatory protein accessory to GcvA 2427 49.47 0 2690265..2690735 + 156 170082090 bcp ECDH10B_2646 - thiol peroxidase, thioredoxin-dependent 2428 56.31 +1 2690988..2691605 + 205 170082091 hyfA ECDH10B_2647 - hydrogenase 4, 4Fe-4S subunit 2429 54.73 0 2691605..2693623 + 672 170082092 hyfB ECDH10B_2648 - hydrogenase 4, membrane subunit 2430 53.69 0 2693634..2694581 + 315 170082093 hyfC ECDH10B_2649 - hydrogenase 4, membrane subunit 2431 55.35 0 2694598..2696037 + 479 170082094 hyfD ECDH10B_2650 - hydrogenase 4, membrane subunit 2432 53.30 0 2696049..2696699 + 216 170082095 hyfE ECDH10B_2651 - hydrogenase 4, membrane subunit 2433 53.89 0 2696704..2698284 + 526 170082096 hyfF ECDH10B_2652 - hydrogenase 4, membrane subunit 2434 54.32 0 2698274..2699941 + 555 170082097 hyfG ECDH10B_2653 - hydrogenase 4, subunit 2435 54.95 0 2699951..2700496 + 181 170082098 hyfH ECDH10B_2654 - hydrogenase 4, Fe-S subunit 2436 55.73 0 2700493..2701251 + 252 170082099 hyfI ECDH10B_2655 - hydrogenase 4, Fe-S subunit 2437 52.66 0 2701244..2701657 + 137 170082100 hyfJ ECDH10B_2656 - processing element hydrogenase 4 2438 52.61 0 2701687..2703699 + 670 170082101 hyfR ECDH10B_2657 - DNA-binding transcriptional activator, formate sensing 2439 51.24 0 2703721..2704569 + 282 170082102 focB ECDH10B_2658 - formate transporter 2440 54.14 0 2704607..2705668 - 353 170082103 yfgO ECDH10B_2659 - inner membrane protein 2441 53.89 0 2705881..2707344 + 487 170082104 yfgC ECDH10B_2660 - peptidase 2442 52.50 0 2707365..2707724 + 119 170082105 yfgD ECDH10B_2661 - oxidoreductase 2443 53.15 0 2707862..2708608 - 248 170082106 hda ECDH10B_2662 - ATPase regulatory factor involved in DnaA inactivation 2444 51.94 0 2708658..2709947 - 429 170082107 uraA ECDH10B_2663 - uracil transporter 2445 52.95 0 2710033..2710659 - 208 170082108 upp ECDH10B_2664 - uracil phosphoribosyltransferase 2446 52.89 0 2710984..2712021 + 345 170082109 purM ECDH10B_2665 - phosphoribosylaminoimidazole synthetase 2447 53.68 0 2712021..2712659 + 212 170082110 purN ECDH10B_2666 - phosphoribosylglycinamide formyltransferase 1 2448 48.86 0 2712831..2714897 + 688 170082111 ppk ECDH10B_2667 - polyphosphate kinase, component of RNA degradosome 2449 51.17 0 2714902..2716443 + 513 170082112 ppx ECDH10B_2668 - exopolyphosphatase 2450 46.61 0 2716482..2718725 - 747 170082113 yfgF ECDH10B_2669 - inner membrane protein 2451 49.48 0 2719077..2719268 + 63 170082114 yfgG ECDH10B_2670 - hypothetical protein 2452 47.21 0 2719579..2720097 + 172 170082115 yfgH ECDH10B_2671 - outer membrane lipoprotein 2453 49.26 0 2720113..2720652 + 179 170082116 yfgI ECDH10B_2672 - hypothetical protein 2454 54.12 0 2720745..2722322 - 525 170082117 guaA ECDH10B_2673 - GMP synthetase (glutamine aminotransferase) 2455 54.67 0 2722391..2723857 - 488 170082118 guaB ECDH10B_2674 - IMP dehydrogenase 2456 53.25 0 2724019..2725389 + 456 170082119 xseA ECDH10B_2675 - exonuclease VII, large subunit 2457 47.69 0 2725386..2725601 - 71 170082120 yfgJ ECDH10B_2676 - hypothetical protein 2458 52.21 0 2725671..2727143 - 490 170082121 der ECDH10B_2677 - GTP-binding protein 2459 53.27 0 2727261..2728439 - 392 170082122 yfgL ECDH10B_2678 - protein assembly complex, lipoprotein component 2460 49.76 0 2728450..2729070 - 206 170082123 yfgM ECDH10B_2679 - hypothetical protein 2461 54.75 0 2729088..2730362 - 424 170082124 hisS ECDH10B_2680 - histidyl tRNA synthetase 2462 53.26 0 2730473..2731591 - 372 170082125 ispG ECDH10B_2681 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 2463 54.54 0 2731618..2732631 - 337 170082126 yfgA ECDH10B_2682 - hypothetical protein 2464 52.99 0 2732916..2734070 - 384 170082127 yfgB ECDH10B_2683 - hypothetical protein 2465 52.31 0 2734220..2734651 - 143 170082128 ndk ECDH10B_2684 - multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase 2466 56.72 +1 2734800..2737112 - 770 170082129 pbpC ECDH10B_2685 - fused transglycosylase; transpeptidase 2467 52.96 0 2737113..2742074 - 1653 170082130 yfhM ECDH10B_2686 - hypothetical protein 2468 53.19 0 2742281..2743126 + 281 170082131 sseA ECDH10B_2687 - 3-mercaptopyruvate sulfurtransferase 2469 47.10 0 2743944..2744720 - 258 170082132 sseB ECDH10B_2689 - rhodanase-like enzyme, sulfur transfer from thiosulfate 2470 56.85 +1 2744862..2746145 - 427 170082133 pepB ECDH10B_2690 - aminopeptidase B 2471 50.25 0 2746323..2746523 - 66 170082134 yfhJ ECDH10B_2691 - hypothetical protein 2472 51.79 0 2746535..2746870 - 111 170082135 fdx ECDH10B_2692 - [2Fe-2S] ferredoxin 2473 57.70 +1 2746872..2748722 - 616 170082136 hscA ECDH10B_2693 - DnaK-like molecular chaperone specific for IscU 2474 52.33 0 2748739..2749254 - 171 170082137 hscB ECDH10B_2694 - DnaJ-like molecular chaperone specific for IscU 2475 51.54 0 2749350..2749673 - 107 170082138 iscA ECDH10B_2695 - FeS cluster assembly protein 2476 50.13 0 2749690..2750076 - 128 170082139 iscU ECDH10B_2696 - scaffold protein 2477 53.33 0 2750104..2751318 - 404 170082140 iscS ECDH10B_2697 - cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent 2478 53.58 0 2751430..2751918 - 162 170082141 iscR ECDH10B_2698 - Fe-S cluster-containing transcription factor 2479 55.47 0 2752370..2753110 - 246 170082142 yfhQ ECDH10B_2699 - methyltransferase 2480 54.48 0 2753229..2754032 + 267 170082143 suhB ECDH10B_2700 - inositol monophosphatase 2481 50.11 0 2754150..2755031 + 293 170082144 yfhR ECDH10B_2701 - peptidase 2482 51.52 0 2755222..2756502 + 426 170082145 csiE ECDH10B_2702 - stationary phase inducible protein 2483 56.49 +1 2756494..2757633 - 379 170082146 hcaT ECDH10B_2703 - 3-phenylpropionic transporter 2484 49.83 0 2757793..2758683 - 296 170082147 hcaR ECDH10B_2704 - DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism 2485 52.94 0 2758819..2760180 + 453 170082148 hcaE ECDH10B_2705 - 3-phenylpropionate dioxygenase, large (alpha) subunit 2486 52.22 0 2760177..2760695 + 172 170082149 hcaF ECDH10B_2706 - 3-phenylpropionate dioxygenase, small (beta) subunit 2487 55.45 0 2760695..2761015 + 106 170082150 hcaC ECDH10B_2707 - 3-phenylpropionate dioxygenase ferredoxin subunit 2488 56.09 +1 2761012..2761824 + 270 170082151 hcaB ECDH10B_2708 - 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2489 54.03 0 2761834..2763036 + 400 170082152 hcaD ECDH10B_2709 - phenylpropionate dioxygenase, ferredoxin reductase subunit 2490 49.09 0 2763061..2763555 + 164 170082153 yphA ECDH10B_2710 - inner membrane protein 2491 55.21 0 2763603..2764475 - 290 170082154 yphB ECDH10B_2711 - hypothetical protein 2492 55.18 0 2764487..2765548 - 353 170082155 yphC ECDH10B_2712 - oxidoreductase, Zn-dependent and NAD(P)-binding 2493 56.16 +1 2765614..2766612 - 332 170082156 yphD ECDH10B_2713 - sugar ABC transporter membrane protein 2494 56.08 +1 2766637..2768148 - 503 170082157 yphE ECDH10B_2714 - sugar ABC transporter ATP-binding protein 2495 46.14 -1 2768171..2769154 - 327 170082158 yphF ECDH10B_2715 - sugar ABC transporter periplasmic-binding protein 2496 54.88 0 2769251..2772532 - 1093 170082159 yphG ECDH10B_2716 - hypothetical protein 2497 50.59 0 2772650..2773843 + 397 170082160 yphH ECDH10B_2717 - DNA-binding transcriptional regulator 2498 53.35 0 2774041..2775294 - 417 170082161 glyA ECDH10B_2718 - serine hydroxymethyltransferase 2499 52.48 0 2775622..2776812 + 396 170082162 hmp ECDH10B_2719 - fused nitric oxide dioxygenase; dihydropteridine reductase 2 2500 51.03 0 2776857..2777195 - 112 170082163 glnB ECDH10B_2720 - regulatory protein P-II for glutamine synthetase 2501 54.76 0 2777256..2778590 - 444 170082164 yfhA ECDH10B_2721 - DNA-binding response regulator in two-component system 2502 54.20 0 2778580..2779293 - 237 170082165 yfhG ECDH10B_2722 - hypothetical protein 2503 53.15 0 2779458..2780885 - 475 170082166 yfhK ECDH10B_2723 - sensory kinase in two-component system 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0