version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2368 58.65 +1 2629504..2630601 - 365 170082031 cysA ECDH10B_2587 - sulfate/thiosulfate ABC transporter ATP-binding protein 2369 56.62 +1 2630591..2631466 - 291 170082032 cysW ECDH10B_2588 - sulfate/thiosulfate ABC transporter membrane protein 2370 56.24 +1 2631466..2632299 - 277 170082033 cysU ECDH10B_2589 - sulfate/thiosulfate ABC transporter membrane protein 2371 53.79 0 2632299..2633315 - 338 170082034 cysP ECDH10B_2590 - thiosulfate ABC transporter periplasmic substrate-binding protein 2372 55.30 0 2633619..2634410 - 263 170082035 ucpA ECDH10B_2591 - oxidoredutase, sulfate metabolism protein 2373 51.63 0 2634539..2635396 - 285 170082036 yfeT ECDH10B_2592 - DNA-binding transcriptional regulator 2374 53.51 0 2635560..2636456 + 298 170082037 yfeU ECDH10B_2593 - PTS component 2375 56.56 +1 2636460..2637884 + 474 170082038 murP ECDH10B_2594 - fused PTS enzymes: IIB component; IIC component 2376 51.88 0 2637889..2639193 + 434 170082039 yfeW ECDH10B_2595 - periplasmic esterase 2377 56.00 +1 2639433..2640332 - 299 170082040 yfeX ECDH10B_2596 - hypothetical protein 2378 50.87 0 2640428..2641003 - 191 170082041 yfeY ECDH10B_2597 - hypothetical protein 2379 52.89 0 2641064..2641513 - 149 170082042 yfeZ ECDH10B_2598 - inner membrane protein 2380 51.64 0 2641500..2641925 - 141 170082043 ypeA ECDH10B_2599 - acyltransferase 2381 49.77 0 2642139..2643008 + 289 170082044 amiA ECDH10B_2600 - N-acetylmuramoyl-l-alanine amidase I 2382 54.67 0 2643012..2643911 + 299 170082045 hemF ECDH10B_2601 - coproporphyrinogen III oxidase 2383 53.37 0 2643917..2644969 - 350 170082046 yfeG ECDH10B_2602 - DNA-binding transcriptional regulator 2384 58.08 +1 2645015..2645515 - 166 170082047 yffI ECDH10B_2603 - carboxysome structural protein with role in ethanolamine utilization 2385 56.36 +1 2645528..2646187 - 219 170082048 eutL ECDH10B_2604 - carboxysome structural protein with role in ethanolamine utilization 2386 56.64 +1 2646197..2647084 - 295 170082049 eutC ECDH10B_2605 - ethanolamine ammonia-lyase, small subunit (light chain) 2387 55.65 0 2647105..2648466 - 453 170082050 eutB ECDH10B_2606 - ethanolamine ammonia-lyase, large subunit, heavy chain 2388 53.47 0 2648558..2649853 + 431 170082051 intZ ECDH10B_2607 - CPZ-55 prophage; integrase 2389 44.39 -1 2650044..2650685 + 213 170082052 yffL ECDH10B_2608 - CPZ-55 prophage; hypothetical protein 2390 48.78 0 2651155..2651400 + 81 170082053 yffM ECDH10B_2609 - CPZ-55 prophage; hypothetical protein 2391 46.61 0 2651397..2651780 + 127 170082054 yffN ECDH10B_2610 - CPZ-55 prophage; hypothetical protein 2392 48.92 0 2651898..2652314 + 138 170082055 yffO ECDH10B_2611 - CPZ-55 prophage; hypothetical protein 2393 52.36 0 2652311..2652904 + 197 170082056 yffP ECDH10B_2612 - CPZ-55 prophage; hypothetical protein 2394 44.02 -1 2653364..2653756 + 130 170082057 yffQ ECDH10B_2613 - CPZ-55 prophage; hypothetical protein 2395 44.02 -1 2653767..2654159 + 130 170082058 yffR ECDH10B_2614 - CPZ-55 prophage; hypothetical protein 2396 49.88 0 2654280..2655119 + 279 170082059 yffS ECDH10B_2615 - CPZ-55 prophage; hypothetical protein 2397 59.12 +1 2655268..2656671 - 467 170082060 eutA ECDH10B_2616 - reactivating factor for ethanolamine ammonia lyase 2398 55.18 0 2656668..2657894 - 408 170082061 eutH ECDH10B_2617 - inner membrane protein 2399 58.59 +1 2658111..2659298 - 395 170082062 eutG ECDH10B_2618 - alcohol dehydrogenase in ethanolamine utilization 2400 58.66 +1 2659288..2660124 - 278 170082063 eutJ ECDH10B_2619 - chaperonin, ethanolamine utilization protein 2401 57.12 +1 2660135..2661538 - 467 170082064 eutE ECDH10B_2620 - aldehyde dehydrogenase 2402 53.12 0 2661550..2661837 - 95 170082065 cchB ECDH10B_2621 - carboxysome structural protein, ethanolamine utilization protein 2403 58.16 +1 2661944..2662237 - 97 170082066 cchA ECDH10B_2622 - carboxysome structural protein, ethanolamine utilization protein 2404 58.21 +1 2662276..2663292 - 338 170082067 eutI ECDH10B_2623 - phosphotransacetylase subunit 2405 58.58 +1 2663289..2664092 - 267 170082068 eutT ECDH10B_2624 - cobalamin adenosyltransferase in ethanolamine utilization 2406 55.98 +1 2664089..2664790 - 233 170082069 eutQ ECDH10B_2625 - hypothetical protein 2407 49.79 0 2664765..2665244 - 159 170082070 eutP ECDH10B_2626 - hypothetical protein 2408 50.60 0 2665257..2665592 - 111 170082071 ypfE ECDH10B_2627 - carboxysome structural protein with role in ethanol utilization 2409 54.12 0 2665885..2668164 - 759 170082072 maeB ECDH10B_2628 - fused malic enzyme oxidoreductase; phosphotransacetylase 2410 50.26 0 2668453..2669403 + 316 170082073 talA ECDH10B_2629 - transaldolase A 2411 54.64 0 2669423..2671426 + 667 170082074 tktB ECDH10B_2630 - transketolase 2, thiamin-binding 2412 54.60 0 2671521..2672564 - 347 170082075 ypfG ECDH10B_2631 - hypothetical protein 2413 48.61 0 2672690..2673265 - 191 170082076 yffH ECDH10B_2632 - NUDIX hydrolase 2414 55.71 0 2673333..2675312 - 659 170082077 aegA ECDH10B_2633 - fused oxidoreductase: FeS binding subunit; NAD/FAD-binding subunit 2415 51.62 0 2675518..2677218 + 566 170082078 narQ ECDH10B_2634 - sensory histidine kinase in two-component regulatory system with NarP (NarL) 2416 54.46 0 2677382..2680495 + 1037 170082079 acrD ECDH10B_2635 - aminoglycoside/multidrug efflux system 2417 46.78 0 2681034..2681390 + 118 170082080 yffB ECDH10B_2636 - hypothetical protein 2418 53.46 0 2681394..2682521 + 375 170082081 dapE ECDH10B_2637 - N-succinyl-diaminopimelate deacylase 2419 48.26 0 2682549..2682749 + 66 170082082 ypfN ECDH10B_2638 - hypothetical protein 2420 53.93 0 2682859..2683557 - 232 170082083 ypfH ECDH10B_2639 - hydrolase 2421 55.26 0 2683631..2685646 - 671 170082084 ypfI ECDH10B_2640 - hydrolase 2422 53.59 0 2685661..2686524 - 287 170082085 ypfJ ECDH10B_2641 - hypothetical protein 2423 52.24 0 2686692..2687405 - 237 170082086 purC ECDH10B_2642 - phosphoribosylaminoimidazole-succinocarboxamide synthetase 2424 55.46 0 2687618..2688652 - 344 170082087 nlpB ECDH10B_2643 - lipoprotein 2425 51.76 0 2688669..2689547 - 292 170082088 dapA ECDH10B_2644 - dihydrodipicolinate synthase 2426 50.09 0 2689693..2690265 + 190 170082089 gcvR ECDH10B_2645 - DNA-binding transcriptional repressor, regulatory protein accessory to GcvA 2427 49.47 0 2690265..2690735 + 156 170082090 bcp ECDH10B_2646 - thiol peroxidase, thioredoxin-dependent 2428 56.31 +1 2690988..2691605 + 205 170082091 hyfA ECDH10B_2647 - hydrogenase 4, 4Fe-4S subunit 2429 54.73 0 2691605..2693623 + 672 170082092 hyfB ECDH10B_2648 - hydrogenase 4, membrane subunit 2430 53.69 0 2693634..2694581 + 315 170082093 hyfC ECDH10B_2649 - hydrogenase 4, membrane subunit 2431 55.35 0 2694598..2696037 + 479 170082094 hyfD ECDH10B_2650 - hydrogenase 4, membrane subunit 2432 53.30 0 2696049..2696699 + 216 170082095 hyfE ECDH10B_2651 - hydrogenase 4, membrane subunit 2433 53.89 0 2696704..2698284 + 526 170082096 hyfF ECDH10B_2652 - hydrogenase 4, membrane subunit 2434 54.32 0 2698274..2699941 + 555 170082097 hyfG ECDH10B_2653 - hydrogenase 4, subunit 2435 54.95 0 2699951..2700496 + 181 170082098 hyfH ECDH10B_2654 - hydrogenase 4, Fe-S subunit 2436 55.73 0 2700493..2701251 + 252 170082099 hyfI ECDH10B_2655 - hydrogenase 4, Fe-S subunit 2437 52.66 0 2701244..2701657 + 137 170082100 hyfJ ECDH10B_2656 - processing element hydrogenase 4 2438 52.61 0 2701687..2703699 + 670 170082101 hyfR ECDH10B_2657 - DNA-binding transcriptional activator, formate sensing 2439 51.24 0 2703721..2704569 + 282 170082102 focB ECDH10B_2658 - formate transporter 2440 54.14 0 2704607..2705668 - 353 170082103 yfgO ECDH10B_2659 - inner membrane protein 2441 53.89 0 2705881..2707344 + 487 170082104 yfgC ECDH10B_2660 - peptidase 2442 52.50 0 2707365..2707724 + 119 170082105 yfgD ECDH10B_2661 - oxidoreductase 2443 53.15 0 2707862..2708608 - 248 170082106 hda ECDH10B_2662 - ATPase regulatory factor involved in DnaA inactivation 2444 51.94 0 2708658..2709947 - 429 170082107 uraA ECDH10B_2663 - uracil transporter 2445 52.95 0 2710033..2710659 - 208 170082108 upp ECDH10B_2664 - uracil phosphoribosyltransferase 2446 52.89 0 2710984..2712021 + 345 170082109 purM ECDH10B_2665 - phosphoribosylaminoimidazole synthetase 2447 53.68 0 2712021..2712659 + 212 170082110 purN ECDH10B_2666 - phosphoribosylglycinamide formyltransferase 1 2448 48.86 0 2712831..2714897 + 688 170082111 ppk ECDH10B_2667 - polyphosphate kinase, component of RNA degradosome 2449 51.17 0 2714902..2716443 + 513 170082112 ppx ECDH10B_2668 - exopolyphosphatase 2450 46.61 0 2716482..2718725 - 747 170082113 yfgF ECDH10B_2669 - inner membrane protein 2451 49.48 0 2719077..2719268 + 63 170082114 yfgG ECDH10B_2670 - hypothetical protein 2452 47.21 0 2719579..2720097 + 172 170082115 yfgH ECDH10B_2671 - outer membrane lipoprotein 2453 49.26 0 2720113..2720652 + 179 170082116 yfgI ECDH10B_2672 - hypothetical protein 2454 54.12 0 2720745..2722322 - 525 170082117 guaA ECDH10B_2673 - GMP synthetase (glutamine aminotransferase) 2455 54.67 0 2722391..2723857 - 488 170082118 guaB ECDH10B_2674 - IMP dehydrogenase 2456 53.25 0 2724019..2725389 + 456 170082119 xseA ECDH10B_2675 - exonuclease VII, large subunit 2457 47.69 0 2725386..2725601 - 71 170082120 yfgJ ECDH10B_2676 - hypothetical protein 2458 52.21 0 2725671..2727143 - 490 170082121 der ECDH10B_2677 - GTP-binding protein 2459 53.27 0 2727261..2728439 - 392 170082122 yfgL ECDH10B_2678 - protein assembly complex, lipoprotein component 2460 49.76 0 2728450..2729070 - 206 170082123 yfgM ECDH10B_2679 - hypothetical protein 2461 54.75 0 2729088..2730362 - 424 170082124 hisS ECDH10B_2680 - histidyl tRNA synthetase 2462 53.26 0 2730473..2731591 - 372 170082125 ispG ECDH10B_2681 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 2463 54.54 0 2731618..2732631 - 337 170082126 yfgA ECDH10B_2682 - hypothetical protein 2464 52.99 0 2732916..2734070 - 384 170082127 yfgB ECDH10B_2683 - hypothetical protein 2465 52.31 0 2734220..2734651 - 143 170082128 ndk ECDH10B_2684 - multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase 2466 56.72 +1 2734800..2737112 - 770 170082129 pbpC ECDH10B_2685 - fused transglycosylase; transpeptidase 2467 52.96 0 2737113..2742074 - 1653 170082130 yfhM ECDH10B_2686 - hypothetical protein 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0