version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2302 46.01 -1 2557642..2558004 + 120 170081965 yfdG ECDH10B_2513 - CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) 2303 39.52 -2 2558001..2558921 + 306 170081966 yfdH ECDH10B_2514 - CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase 2304 27.55 -2 2558918..2560249 + 443 170081967 yfdI ECDH10B_2515 - CPS-53 (KpLE1) prophage; inner membrane protein 2305 45.58 -1 2560864..2561304 - 146 170081968 yfdK ECDH10B_2517 - CPS-53 (KpLE1) prophage; hypothetical protein 2306 49.52 0 2561331..2561849 - 172 170081969 yfdL ECDH10B_2518 - CPS-53 (KpLE1) prophage; hypothetical protein 2307 52.54 0 2561899..2562174 - 91 170081970 yfdM ECDH10B_2519 - CPS-53 (KpLE1) prophage; methyltransferase 2308 54.34 0 2562174..2562668 - 164 170081971 yfdN ECDH10B_2520 - CPS-53 (KpLE1) prophage; hypothetical protein 2309 56.10 +1 2562665..2563033 - 122 170081972 yfdO ECDH10B_2521 - CPS-53 (KpLE1) prophage; defective phage replication protein O 2310 49.44 0 2563307..2563753 + 148 170081973 yfdP ECDH10B_2522 - CPS-53 (KpLE1) prophage; hypothetical protein 2311 45.70 -1 2563819..2564643 + 274 170081974 yfdQ ECDH10B_2523 - CPS-53 (KpLE1) prophage; hypothetical protein 2312 46.18 -1 2564771..2565307 + 178 170081975 yfdR ECDH10B_2524 - CPS-53 (KpLE1) prophage; hypothetical protein 2313 47.11 0 2565298..2565660 + 120 170081976 yfdS ECDH10B_2525 - CPS-53 (KpLE1) prophage; hypothetical protein 2314 42.81 -1 2565660..2565965 + 101 170081977 yfdT ECDH10B_2526 - CPS-53 (KpLE1) prophage; hypothetical protein 2315 43.26 -1 2565881..2566021 + 46 170081978 ypdJ ECDH10B_2527 - hypothetical protein 2316 43.78 -1 2566097..2566297 + 66 170081979 torI ECDH10B_2528 - response regulator inhibitor for tor operon 2317 48.08 0 2566481..2567416 - 311 170081980 dsdC ECDH10B_2529 - DNA-binding transcriptional dual regulator 2318 48.73 0 2567634..2568971 + 445 170081981 dsdX ECDH10B_2530 - transporter 2319 50.87 0 2568989..2570317 + 442 170081982 dsdA ECDH10B_2531 - D-serine ammonia-lyase 2320 41.65 -1 2570425..2571963 - 512 170081983 emrY ECDH10B_2532 - multidrug efflux system 2321 41.92 -1 2571963..2573126 - 387 170081984 emrK ECDH10B_2533 - EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component 2322 40.00 -2 2573542..2574156 + 204 170081985 evgA ECDH10B_2534 - DNA-binding response regulator in two-component regulatory system with EvgS 2323 45.46 -1 2577810..2578955 - 381 170081986 yfdE ECDH10B_2536 - CoA-transferase, NAD(P)-binding 2324 44.76 -1 2579029..2579973 - 314 170081987 yfdV ECDH10B_2537 - transporter 2325 46.61 0 2580043..2581737 - 564 170081988 oxc ECDH10B_2538 - oxalyl-CoA decarboxylase 2326 47.08 0 2581791..2583041 - 416 170081989 frc ECDH10B_2539 - formyl-CoA transferase, NAD(P)-binding 2327 46.23 -1 2583554..2584189 - 211 170081990 yfdX ECDH10B_2540 - hypothetical protein 2328 40.22 -2 2584485..2584760 + 91 170081991 ypdI ECDH10B_2541 - lipoprotein involved in colanic acid biosynthesis 2329 48.15 0 2584837..2585079 - 80 170081992 yfdY ECDH10B_2542 - inner membrane protein 2330 51.47 0 2585432..2586352 + 306 170081993 lpxP ECDH10B_2543 - palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase 2331 54.96 0 2586844..2588082 - 412 170081994 yfdZ ECDH10B_2544 - prediected aminotransferase, PLP-dependent 2332 51.41 0 2588458..2590155 + 565 170081995 ypdA ECDH10B_2545 - sensory kinase in two-component system with YpdB 2333 47.48 0 2590170..2590904 + 244 170081996 ypdB ECDH10B_2546 - response regulator in two-component system withYpdA 2334 53.61 0 2590917..2591774 + 285 170081997 ypdC ECDH10B_2547 - DNA-binding protein 2335 55.21 0 2591777..2594272 - 831 170081998 ypdD ECDH10B_2548 - fused PTS enzymes: Hpr component; enzyme I component; enzyme IIA component 2336 58.29 +1 2594297..2595334 - 345 170081999 ypdE ECDH10B_2549 - peptidase 2337 56.81 +1 2595334..2596419 - 361 170082000 ypdF ECDH10B_2550 - peptidase 2338 54.33 0 2596434..2597681 - 415 170082001 ypdG ECDH10B_2551 - enzyme IIC component of PTS 2339 51.38 0 2597703..2598029 - 108 170082002 ypdH ECDH10B_2552 - enzyme IIB component of PTS 2340 51.55 0 2598248..2599213 - 321 170082003 glk ECDH10B_2553 - glucokinase 2341 53.86 0 2599417..2600673 + 418 170082004 yfeO ECDH10B_2554 - ion channel protein 2342 54.13 0 2600788..2601114 + 108 170082005 ypeC ECDH10B_2555 - hypothetical protein 2343 53.27 0 2601255..2602493 - 412 170082006 mntH ECDH10B_2556 - manganese/divalent cation transporter 2344 49.88 0 2602829..2604031 + 400 170082007 nupC ECDH10B_2557 - nucleoside (except guanosine) transporter 2345 51.93 0 2604118..2605230 + 370 170082008 insL-3 ECDH10B_2558 - IS186/IS421 transposase 2346 49.00 0 2605430..2607619 - 729 170082009 yfeA ECDH10B_2559 - diguanylate cyclase 2347 50.14 0 2608254..2608598 + 114 170082010 yfeC ECDH10B_2562 - DNA-binding transcriptional regulator 2348 46.06 -1 2608600..2608992 + 130 170082011 yfeD ECDH10B_2563 - DNA-binding transcriptional regulator 2349 52.54 0 2609044..2610459 - 471 170082012 gltX ECDH10B_2564 - glutamyl-tRNA synthetase 2350 50.51 0 2611380..2612264 - 294 170082013 xapR ECDH10B_2569 - DNA-binding transcriptional activator 2351 48.05 0 2612516..2613772 - 418 170082014 xapB ECDH10B_2570 - xanthosine transporter 2352 51.68 0 2613832..2614665 - 277 170082015 xapA ECDH10B_2571 - purine nucleoside phosphorylase II 2353 45.23 -1 2614914..2615678 + 254 170082016 yfeN ECDH10B_2572 - outer membrane protein 2354 53.94 0 2615717..2616643 - 308 170082017 yfeR ECDH10B_2573 - DNA-binding transcriptional regulator 2355 51.75 0 2616733..2617731 + 332 170082018 yfeH ECDH10B_2574 - inner membrane protein 2356 51.60 0 2617728..2617946 - 72 170082019 ypeB ECDH10B_2575 - hypothetical protein 2357 54.41 0 2617948..2619963 - 671 170082020 ligA ECDH10B_2576 - DNA ligase, NAD(+)-dependent 2358 55.12 0 2620034..2621020 - 328 170082021 zipA ECDH10B_2577 - cell division protein involved in Z ring assembly 2359 50.13 0 2621250..2622011 + 253 170082022 cysZ ECDH10B_2578 - inner membrane protein 2360 50.31 0 2622196..2623167 + 323 170082023 cysK ECDH10B_2579 - cysteine synthase A, O-acetylserine sulfhydrolase A subunit 2361 50.78 0 2623551..2623808 + 85 170082024 ptsH ECDH10B_2580 - phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) 2362 49.65 0 2623853..2625580 + 575 170082025 ptsI ECDH10B_2581 - PEP-protein phosphotransferase of PTS system (enzyme I) 2363 47.25 0 2625621..2626130 + 169 170082026 crr ECDH10B_2582 - glucose-specific enzyme IIA component of PTS 2364 52.23 0 2626173..2627024 - 283 170082027 pdxK ECDH10B_2583 - pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase 2365 46.40 0 2627129..2627503 + 124 170082028 yfeK ECDH10B_2584 - hypothetical protein 2366 39.18 -2 2627536..2628270 + 244 170082029 yfeS ECDH10B_2585 - hypothetical protein 2367 56.47 +1 2628459..2629370 - 303 170082030 cysM ECDH10B_2586 - cysteine synthase B (O-acetylserine sulfhydrolase B) 2368 58.65 +1 2629504..2630601 - 365 170082031 cysA ECDH10B_2587 - sulfate/thiosulfate ABC transporter ATP-binding protein 2369 56.62 +1 2630591..2631466 - 291 170082032 cysW ECDH10B_2588 - sulfate/thiosulfate ABC transporter membrane protein 2370 56.24 +1 2631466..2632299 - 277 170082033 cysU ECDH10B_2589 - sulfate/thiosulfate ABC transporter membrane protein 2371 53.79 0 2632299..2633315 - 338 170082034 cysP ECDH10B_2590 - thiosulfate ABC transporter periplasmic substrate-binding protein 2372 55.30 0 2633619..2634410 - 263 170082035 ucpA ECDH10B_2591 - oxidoredutase, sulfate metabolism protein 2373 51.63 0 2634539..2635396 - 285 170082036 yfeT ECDH10B_2592 - DNA-binding transcriptional regulator 2374 53.51 0 2635560..2636456 + 298 170082037 yfeU ECDH10B_2593 - PTS component 2375 56.56 +1 2636460..2637884 + 474 170082038 murP ECDH10B_2594 - fused PTS enzymes: IIB component; IIC component 2376 51.88 0 2637889..2639193 + 434 170082039 yfeW ECDH10B_2595 - periplasmic esterase 2377 56.00 +1 2639433..2640332 - 299 170082040 yfeX ECDH10B_2596 - hypothetical protein 2378 50.87 0 2640428..2641003 - 191 170082041 yfeY ECDH10B_2597 - hypothetical protein 2379 52.89 0 2641064..2641513 - 149 170082042 yfeZ ECDH10B_2598 - inner membrane protein 2380 51.64 0 2641500..2641925 - 141 170082043 ypeA ECDH10B_2599 - acyltransferase 2381 49.77 0 2642139..2643008 + 289 170082044 amiA ECDH10B_2600 - N-acetylmuramoyl-l-alanine amidase I 2382 54.67 0 2643012..2643911 + 299 170082045 hemF ECDH10B_2601 - coproporphyrinogen III oxidase 2383 53.37 0 2643917..2644969 - 350 170082046 yfeG ECDH10B_2602 - DNA-binding transcriptional regulator 2384 58.08 +1 2645015..2645515 - 166 170082047 yffI ECDH10B_2603 - carboxysome structural protein with role in ethanolamine utilization 2385 56.36 +1 2645528..2646187 - 219 170082048 eutL ECDH10B_2604 - carboxysome structural protein with role in ethanolamine utilization 2386 56.64 +1 2646197..2647084 - 295 170082049 eutC ECDH10B_2605 - ethanolamine ammonia-lyase, small subunit (light chain) 2387 55.65 0 2647105..2648466 - 453 170082050 eutB ECDH10B_2606 - ethanolamine ammonia-lyase, large subunit, heavy chain 2388 53.47 0 2648558..2649853 + 431 170082051 intZ ECDH10B_2607 - CPZ-55 prophage; integrase 2389 44.39 -1 2650044..2650685 + 213 170082052 yffL ECDH10B_2608 - CPZ-55 prophage; hypothetical protein 2390 48.78 0 2651155..2651400 + 81 170082053 yffM ECDH10B_2609 - CPZ-55 prophage; hypothetical protein 2391 46.61 0 2651397..2651780 + 127 170082054 yffN ECDH10B_2610 - CPZ-55 prophage; hypothetical protein 2392 48.92 0 2651898..2652314 + 138 170082055 yffO ECDH10B_2611 - CPZ-55 prophage; hypothetical protein 2393 52.36 0 2652311..2652904 + 197 170082056 yffP ECDH10B_2612 - CPZ-55 prophage; hypothetical protein 2394 44.02 -1 2653364..2653756 + 130 170082057 yffQ ECDH10B_2613 - CPZ-55 prophage; hypothetical protein 2395 44.02 -1 2653767..2654159 + 130 170082058 yffR ECDH10B_2614 - CPZ-55 prophage; hypothetical protein 2396 49.88 0 2654280..2655119 + 279 170082059 yffS ECDH10B_2615 - CPZ-55 prophage; hypothetical protein 2397 59.12 +1 2655268..2656671 - 467 170082060 eutA ECDH10B_2616 - reactivating factor for ethanolamine ammonia lyase 2398 55.18 0 2656668..2657894 - 408 170082061 eutH ECDH10B_2617 - inner membrane protein 2399 58.59 +1 2658111..2659298 - 395 170082062 eutG ECDH10B_2618 - alcohol dehydrogenase in ethanolamine utilization 2400 58.66 +1 2659288..2660124 - 278 170082063 eutJ ECDH10B_2619 - chaperonin, ethanolamine utilization protein 2401 57.12 +1 2660135..2661538 - 467 170082064 eutE ECDH10B_2620 - aldehyde dehydrogenase 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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