version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2270 48.94 0 2523869..2524528 - 219 170081933 dedA ECDH10B_2479 - inner membrane protein 2271 55.35 0 2524611..2525423 - 270 170081934 truA ECDH10B_2480 - tRNA pseudouridine synthase A 2272 54.93 0 2525423..2526436 - 337 170081935 usg ECDH10B_2481 - semialdehyde dehydrogenase 2273 53.03 0 2526502..2527638 - 378 170081936 pdxB ECDH10B_2482 - erythronate-4-phosphate dehydrogenase 2274 52.01 0 2527737..2528732 + 331 170081937 flk ECDH10B_2483 - flagella assembly protein 2275 56.57 +1 2528729..2529907 - 392 170081938 yfcJ ECDH10B_2484 - transporter 2276 56.59 +1 2530172..2531392 - 406 170081939 fabB ECDH10B_2485 - 3-oxoacyl-[acyl-carrier-protein] synthase I 2277 52.86 0 2531551..2533557 + 668 170081940 mnmC ECDH10B_2486 - bifunctional 5-carboxymethylamino-methyl-2-thiouridine oxidoreductase and 5-aminomethyl-2-thiouridine methylase 2278 52.69 0 2533678..2533956 - 92 170081941 yfcL ECDH10B_2487 - hypothetical protein 2279 50.27 0 2533990..2534538 - 182 170081942 yfcM ECDH10B_2488 - hypothetical protein 2280 52.72 0 2534538..2535347 - 269 170081943 yfcA ECDH10B_2489 - inner membrane protein 2281 55.39 0 2535347..2536171 - 274 170081944 mepA ECDH10B_2490 - murein DD-endopeptidase 2282 56.72 +1 2536175..2537260 - 361 170081945 aroC ECDH10B_2491 - chorismate synthase 2283 52.52 0 2537295..2538227 - 310 170081946 prmB ECDH10B_2492 - ribosomal protein L3 N5-glutamine methyltransferase 2284 53.26 0 2538393..2538944 + 183 170081947 yfcN ECDH10B_2493 - hypothetical protein 2285 45.50 -1 2539015..2539836 - 273 170081948 yfcO ECDH10B_2494 - hypothetical protein 2286 48.70 0 2539838..2540377 - 179 170081949 yfcP ECDH10B_2495 - fimbrial-like adhesin protein 2287 46.63 0 2540374..2540862 - 162 170081950 yfcQ ECDH10B_2496 - fimbrial-like adhesin protein 2288 49.12 0 2540859..2541371 - 170 170081951 yfcR ECDH10B_2497 - fimbrial-like adhesin protein 2289 51.00 0 2541371..2542123 - 250 170081952 yfcS ECDH10B_2498 - periplasmic pilus chaperone 2290 53.29 0 2542143..2543039 - 298 170081953 yfcT ECDH10B_2499 - outer membrane export usher protein 2291 51.01 0 2543052..2544788 - 578 170081954 yfcU ECDH10B_2500 - export usher protein 2292 46.10 -1 2544870..2545433 - 187 170081955 yfcV ECDH10B_2502 - fimbrial-like adhesin protein 2293 53.29 0 2546114..2546599 - 161 170081956 sixA ECDH10B_2503 - phosphohistidine phosphatase 2294 52.26 0 2546802..2548946 - 714 170081957 fadJ ECDH10B_2504 - fused enoyl-CoA hydratase and epimerase and isomerase; 3-hydroxyacyl-CoA dehydrogenase 2295 55.84 0 2548946..2550256 - 436 170081958 yfcY ECDH10B_2505 - beta-ketoacyl-CoA thiolase, anaerobic, subunit 2296 51.58 0 2550437..2550721 - 94 170081959 yfcZ ECDH10B_2506 - hypothetical protein 2297 49.81 0 2551087..2552433 + 448 170081960 fadL ECDH10B_2507 - long-chain fatty acid outer membrane transporter 2298 35.51 -2 2552799..2553857 + 352 170081961 yfdF ECDH10B_2508 - hypothetical protein 2299 51.85 0 2554039..2554794 - 251 170081962 vacJ ECDH10B_2509 - lipoprotein 2300 48.55 0 2555088..2556020 + 310 170081963 yfdC ECDH10B_2510 - inner membrane protein 2301 47.75 0 2556332..2557489 + 385 170081964 intS ECDH10B_2512 - CPS-53 (KpLE1) prophage; prophage CPS-53 integrase 2302 46.01 -1 2557642..2558004 + 120 170081965 yfdG ECDH10B_2513 - CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) 2303 39.52 -2 2558001..2558921 + 306 170081966 yfdH ECDH10B_2514 - CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase 2304 27.55 -2 2558918..2560249 + 443 170081967 yfdI ECDH10B_2515 - CPS-53 (KpLE1) prophage; inner membrane protein 2305 45.58 -1 2560864..2561304 - 146 170081968 yfdK ECDH10B_2517 - CPS-53 (KpLE1) prophage; hypothetical protein 2306 49.52 0 2561331..2561849 - 172 170081969 yfdL ECDH10B_2518 - CPS-53 (KpLE1) prophage; hypothetical protein 2307 52.54 0 2561899..2562174 - 91 170081970 yfdM ECDH10B_2519 - CPS-53 (KpLE1) prophage; methyltransferase 2308 54.34 0 2562174..2562668 - 164 170081971 yfdN ECDH10B_2520 - CPS-53 (KpLE1) prophage; hypothetical protein 2309 56.10 +1 2562665..2563033 - 122 170081972 yfdO ECDH10B_2521 - CPS-53 (KpLE1) prophage; defective phage replication protein O 2310 49.44 0 2563307..2563753 + 148 170081973 yfdP ECDH10B_2522 - CPS-53 (KpLE1) prophage; hypothetical protein 2311 45.70 -1 2563819..2564643 + 274 170081974 yfdQ ECDH10B_2523 - CPS-53 (KpLE1) prophage; hypothetical protein 2312 46.18 -1 2564771..2565307 + 178 170081975 yfdR ECDH10B_2524 - CPS-53 (KpLE1) prophage; hypothetical protein 2313 47.11 0 2565298..2565660 + 120 170081976 yfdS ECDH10B_2525 - CPS-53 (KpLE1) prophage; hypothetical protein 2314 42.81 -1 2565660..2565965 + 101 170081977 yfdT ECDH10B_2526 - CPS-53 (KpLE1) prophage; hypothetical protein 2315 43.26 -1 2565881..2566021 + 46 170081978 ypdJ ECDH10B_2527 - hypothetical protein 2316 43.78 -1 2566097..2566297 + 66 170081979 torI ECDH10B_2528 - response regulator inhibitor for tor operon 2317 48.08 0 2566481..2567416 - 311 170081980 dsdC ECDH10B_2529 - DNA-binding transcriptional dual regulator 2318 48.73 0 2567634..2568971 + 445 170081981 dsdX ECDH10B_2530 - transporter 2319 50.87 0 2568989..2570317 + 442 170081982 dsdA ECDH10B_2531 - D-serine ammonia-lyase 2320 41.65 -1 2570425..2571963 - 512 170081983 emrY ECDH10B_2532 - multidrug efflux system 2321 41.92 -1 2571963..2573126 - 387 170081984 emrK ECDH10B_2533 - EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component 2322 40.00 -2 2573542..2574156 + 204 170081985 evgA ECDH10B_2534 - DNA-binding response regulator in two-component regulatory system with EvgS 2323 45.46 -1 2577810..2578955 - 381 170081986 yfdE ECDH10B_2536 - CoA-transferase, NAD(P)-binding 2324 44.76 -1 2579029..2579973 - 314 170081987 yfdV ECDH10B_2537 - transporter 2325 46.61 0 2580043..2581737 - 564 170081988 oxc ECDH10B_2538 - oxalyl-CoA decarboxylase 2326 47.08 0 2581791..2583041 - 416 170081989 frc ECDH10B_2539 - formyl-CoA transferase, NAD(P)-binding 2327 46.23 -1 2583554..2584189 - 211 170081990 yfdX ECDH10B_2540 - hypothetical protein 2328 40.22 -2 2584485..2584760 + 91 170081991 ypdI ECDH10B_2541 - lipoprotein involved in colanic acid biosynthesis 2329 48.15 0 2584837..2585079 - 80 170081992 yfdY ECDH10B_2542 - inner membrane protein 2330 51.47 0 2585432..2586352 + 306 170081993 lpxP ECDH10B_2543 - palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase 2331 54.96 0 2586844..2588082 - 412 170081994 yfdZ ECDH10B_2544 - prediected aminotransferase, PLP-dependent 2332 51.41 0 2588458..2590155 + 565 170081995 ypdA ECDH10B_2545 - sensory kinase in two-component system with YpdB 2333 47.48 0 2590170..2590904 + 244 170081996 ypdB ECDH10B_2546 - response regulator in two-component system withYpdA 2334 53.61 0 2590917..2591774 + 285 170081997 ypdC ECDH10B_2547 - DNA-binding protein 2335 55.21 0 2591777..2594272 - 831 170081998 ypdD ECDH10B_2548 - fused PTS enzymes: Hpr component; enzyme I component; enzyme IIA component 2336 58.29 +1 2594297..2595334 - 345 170081999 ypdE ECDH10B_2549 - peptidase 2337 56.81 +1 2595334..2596419 - 361 170082000 ypdF ECDH10B_2550 - peptidase 2338 54.33 0 2596434..2597681 - 415 170082001 ypdG ECDH10B_2551 - enzyme IIC component of PTS 2339 51.38 0 2597703..2598029 - 108 170082002 ypdH ECDH10B_2552 - enzyme IIB component of PTS 2340 51.55 0 2598248..2599213 - 321 170082003 glk ECDH10B_2553 - glucokinase 2341 53.86 0 2599417..2600673 + 418 170082004 yfeO ECDH10B_2554 - ion channel protein 2342 54.13 0 2600788..2601114 + 108 170082005 ypeC ECDH10B_2555 - hypothetical protein 2343 53.27 0 2601255..2602493 - 412 170082006 mntH ECDH10B_2556 - manganese/divalent cation transporter 2344 49.88 0 2602829..2604031 + 400 170082007 nupC ECDH10B_2557 - nucleoside (except guanosine) transporter 2345 51.93 0 2604118..2605230 + 370 170082008 insL-3 ECDH10B_2558 - IS186/IS421 transposase 2346 49.00 0 2605430..2607619 - 729 170082009 yfeA ECDH10B_2559 - diguanylate cyclase 2347 50.14 0 2608254..2608598 + 114 170082010 yfeC ECDH10B_2562 - DNA-binding transcriptional regulator 2348 46.06 -1 2608600..2608992 + 130 170082011 yfeD ECDH10B_2563 - DNA-binding transcriptional regulator 2349 52.54 0 2609044..2610459 - 471 170082012 gltX ECDH10B_2564 - glutamyl-tRNA synthetase 2350 50.51 0 2611380..2612264 - 294 170082013 xapR ECDH10B_2569 - DNA-binding transcriptional activator 2351 48.05 0 2612516..2613772 - 418 170082014 xapB ECDH10B_2570 - xanthosine transporter 2352 51.68 0 2613832..2614665 - 277 170082015 xapA ECDH10B_2571 - purine nucleoside phosphorylase II 2353 45.23 -1 2614914..2615678 + 254 170082016 yfeN ECDH10B_2572 - outer membrane protein 2354 53.94 0 2615717..2616643 - 308 170082017 yfeR ECDH10B_2573 - DNA-binding transcriptional regulator 2355 51.75 0 2616733..2617731 + 332 170082018 yfeH ECDH10B_2574 - inner membrane protein 2356 51.60 0 2617728..2617946 - 72 170082019 ypeB ECDH10B_2575 - hypothetical protein 2357 54.41 0 2617948..2619963 - 671 170082020 ligA ECDH10B_2576 - DNA ligase, NAD(+)-dependent 2358 55.12 0 2620034..2621020 - 328 170082021 zipA ECDH10B_2577 - cell division protein involved in Z ring assembly 2359 50.13 0 2621250..2622011 + 253 170082022 cysZ ECDH10B_2578 - inner membrane protein 2360 50.31 0 2622196..2623167 + 323 170082023 cysK ECDH10B_2579 - cysteine synthase A, O-acetylserine sulfhydrolase A subunit 2361 50.78 0 2623551..2623808 + 85 170082024 ptsH ECDH10B_2580 - phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) 2362 49.65 0 2623853..2625580 + 575 170082025 ptsI ECDH10B_2581 - PEP-protein phosphotransferase of PTS system (enzyme I) 2363 47.25 0 2625621..2626130 + 169 170082026 crr ECDH10B_2582 - glucose-specific enzyme IIA component of PTS 2364 52.23 0 2626173..2627024 - 283 170082027 pdxK ECDH10B_2583 - pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase 2365 46.40 0 2627129..2627503 + 124 170082028 yfeK ECDH10B_2584 - hypothetical protein 2366 39.18 -2 2627536..2628270 + 244 170082029 yfeS ECDH10B_2585 - hypothetical protein 2367 56.47 +1 2628459..2629370 - 303 170082030 cysM ECDH10B_2586 - cysteine synthase B (O-acetylserine sulfhydrolase B) 2368 58.65 +1 2629504..2630601 - 365 170082031 cysA ECDH10B_2587 - sulfate/thiosulfate ABC transporter ATP-binding protein 2369 56.62 +1 2630591..2631466 - 291 170082032 cysW ECDH10B_2588 - sulfate/thiosulfate ABC transporter membrane protein 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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