version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2217 58.98 +1 2464010..2464972 - 320 170081880 menC ECDH10B_2422 - o-succinylbenzoyl-CoA synthase 2218 55.59 0 2464972..2465829 - 285 170081881 menB ECDH10B_2423 - dihydroxynaphthoic acid synthetase 2219 56.13 +1 2465844..2466602 - 252 170081882 yfbB ECDH10B_2424 - peptidase 2220 58.11 +1 2466599..2468269 - 556 170081883 menD ECDH10B_2425 - bifunctional 2-oxoglutarate decarboxylase and SHCHC synthase 2221 53.40 0 2468358..2469653 - 431 170081884 menF ECDH10B_2426 - isochorismate synthase 2 2222 51.96 0 2469732..2470037 - 101 170081885 elaB ECDH10B_2427 - hypothetical protein 2223 47.84 0 2470092..2470553 - 153 170081886 elaA ECDH10B_2428 - acyltransferase 2224 35.40 -2 2472500..2473711 + 403 170081887 elaD ECDH10B_2431 - hypothetical protein 2225 45.06 -1 2475647..2476618 + 323 170081888 yfbL ECDH10B_2433 - peptidase 2226 45.63 -1 2476721..2477224 + 167 170081889 yfbM ECDH10B_2434 - hypothetical protein 2227 39.05 -2 2477497..2478213 - 238 170081890 yfbN ECDH10B_2435 - hypothetical protein 2228 38.36 -2 2478368..2478844 + 158 170081891 yfbO ECDH10B_2436 - hypothetical protein 2229 43.43 -1 2478900..2479751 + 283 170081892 yfbP ECDH10B_2437 - hypothetical protein 2230 57.43 +1 2479835..2481112 - 425 170081893 nuoN ECDH10B_2438 - NADH:ubiquinone oxidoreductase, membrane subunit N 2231 54.71 0 2481299..2482828 - 509 170081894 nuoM ECDH10B_2439 - NADH:ubiquinone oxidoreductase, membrane subunit M 2232 57.17 +1 2482992..2484833 - 613 170081895 nuoL ECDH10B_2440 - NADH:ubiquinone oxidoreductase, membrane subunit L 2233 54.79 0 2484830..2485132 - 100 170081896 nuoK ECDH10B_2441 - NADH:ubiquinone oxidoreductase, membrane subunit K 2234 53.87 0 2485129..2485683 - 184 170081897 nuoJ ECDH10B_2442 - NADH:ubiquinone oxidoreductase, membrane subunit J 2235 54.33 0 2485695..2486237 - 180 170081898 nuoI ECDH10B_2443 - NADH:ubiquinone oxidoreductase, chain I 2236 54.19 0 2486252..2487229 - 325 170081899 nuoH ECDH10B_2444 - NADH:ubiquinone oxidoreductase, membrane subunit H 2237 56.35 +1 2487226..2489958 - 910 170081900 nuoG ECDH10B_2445 - NADH:ubiquinone oxidoreductase, chain G 2238 56.20 +1 2490005..2491342 - 445 170081901 nuoF ECDH10B_2446 - NADH:ubiquinone oxidoreductase, chain F 2239 55.29 0 2491339..2491839 - 166 170081902 nuoE ECDH10B_2447 - NADH:ubiquinone oxidoreductase, chain E 2240 55.74 0 2491842..2493644 - 600 170081903 nuoC ECDH10B_2448 - NADH:ubiquinone oxidoreductase, chain C,D 2241 51.73 0 2493738..2494400 - 220 170081904 nuoB ECDH10B_2449 - NADH:ubiquinone oxidoreductase, chain B 2242 53.38 0 2494416..2494859 - 147 170081905 nuoA ECDH10B_2450 - NADH:ubiquinone oxidoreductase, membrane subunit A 2243 49.73 0 2495490..2496428 - 312 170081906 lrhA ECDH10B_2451 - DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes 2244 50.49 0 2497348..2498565 + 405 170081907 yfbQ ECDH10B_2452 - aminotransferase 2245 49.33 0 2498649..2499248 + 199 170081908 yfbR ECDH10B_2453 - deoxyribonucleoside 5'-monophosphatase 2246 56.53 +1 2501226..2501876 - 216 170081909 yfbT ECDH10B_2455 - hydrolase or phosphatase 2247 47.68 0 2501887..2502381 - 164 170081910 yfbU ECDH10B_2456 - hypothetical protein 2248 50.88 0 2502464..2502919 - 151 170081911 yfbV ECDH10B_2457 - inner membrane protein 2249 52.20 0 2503257..2504459 + 400 170081912 ackA ECDH10B_2458 - acetate kinase A and propionate kinase 2 2250 55.52 0 2504534..2506678 + 714 170081913 pta ECDH10B_2459 - phosphate acetyltransferase 2251 52.07 0 2506868..2508388 + 506 170081914 yfcC ECDH10B_2460 - inner membrane protein 2252 53.22 0 2508421..2508963 - 180 170081915 yfcD ECDH10B_2461 - NUDIX hydrolase 2253 51.89 0 2509021..2509575 - 184 170081916 yfcE ECDH10B_2462 - phosphatase 2254 51.63 0 2509628..2510272 - 214 170081917 yfcF ECDH10B_2463 - hypothetical protein 2255 51.39 0 2510408..2511055 + 215 170081918 yfcG ECDH10B_2464 - glutathione S-transferase 2256 44.90 -1 2511112..2511474 + 120 170081919 folX ECDH10B_2465 - D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase 2257 54.92 0 2511495..2512388 + 297 170081920 yfcH ECDH10B_2466 - hypothetical protein 2258 45.57 -1 2512436..2513326 - 296 170081921 yfcI ECDH10B_2467 - putative transposase 2259 51.94 0 2513523..2514296 - 257 170081922 hisP ECDH10B_2468 - histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein 2260 49.65 0 2514304..2515020 - 238 170081923 hisM ECDH10B_2469 - histidine/lysine/arginine/ornithine ABC transporter membrane protein 2261 52.55 0 2515017..2515703 - 228 170081924 hisQ ECDH10B_2470 - histidine/lysine/arginine/ornithine ABC transporter membrane protein 2262 48.79 0 2515793..2516575 - 260 170081925 hisJ ECDH10B_2471 - histidine/lysine/arginine/ornithine ABC transporter periplasmic-binding protein 2263 50.19 0 2516796..2517578 - 260 170081926 argT ECDH10B_2472 - lysine/arginine/ornithine ABC transporter periplasmic-binding protein 2264 53.16 0 2517844..2518413 - 189 170081927 ubiX ECDH10B_2473 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2265 52.90 0 2518508..2520025 - 505 170081928 purF ECDH10B_2474 - amidophosphoribosyltransferase 2266 49.08 0 2520062..2520550 - 162 170081929 cvpA ECDH10B_2475 - membrane protein required for colicin V production 2267 57.01 +1 2520809..2521471 - 220 170081930 dedD ECDH10B_2476 - hypothetical protein 2268 56.03 +1 2521461..2522729 - 422 170081931 folC ECDH10B_2477 - bifunctional folylpolyglutamate synthase and dihydrofolate synthase 2269 55.41 0 2522799..2523713 - 304 170081932 accD ECDH10B_2478 - acetyl-CoA carboxylase, beta (carboxyltranferase) subunit 2270 48.94 0 2523869..2524528 - 219 170081933 dedA ECDH10B_2479 - inner membrane protein 2271 55.35 0 2524611..2525423 - 270 170081934 truA ECDH10B_2480 - tRNA pseudouridine synthase A 2272 54.93 0 2525423..2526436 - 337 170081935 usg ECDH10B_2481 - semialdehyde dehydrogenase 2273 53.03 0 2526502..2527638 - 378 170081936 pdxB ECDH10B_2482 - erythronate-4-phosphate dehydrogenase 2274 52.01 0 2527737..2528732 + 331 170081937 flk ECDH10B_2483 - flagella assembly protein 2275 56.57 +1 2528729..2529907 - 392 170081938 yfcJ ECDH10B_2484 - transporter 2276 56.59 +1 2530172..2531392 - 406 170081939 fabB ECDH10B_2485 - 3-oxoacyl-[acyl-carrier-protein] synthase I 2277 52.86 0 2531551..2533557 + 668 170081940 mnmC ECDH10B_2486 - bifunctional 5-carboxymethylamino-methyl-2-thiouridine oxidoreductase and 5-aminomethyl-2-thiouridine methylase 2278 52.69 0 2533678..2533956 - 92 170081941 yfcL ECDH10B_2487 - hypothetical protein 2279 50.27 0 2533990..2534538 - 182 170081942 yfcM ECDH10B_2488 - hypothetical protein 2280 52.72 0 2534538..2535347 - 269 170081943 yfcA ECDH10B_2489 - inner membrane protein 2281 55.39 0 2535347..2536171 - 274 170081944 mepA ECDH10B_2490 - murein DD-endopeptidase 2282 56.72 +1 2536175..2537260 - 361 170081945 aroC ECDH10B_2491 - chorismate synthase 2283 52.52 0 2537295..2538227 - 310 170081946 prmB ECDH10B_2492 - ribosomal protein L3 N5-glutamine methyltransferase 2284 53.26 0 2538393..2538944 + 183 170081947 yfcN ECDH10B_2493 - hypothetical protein 2285 45.50 -1 2539015..2539836 - 273 170081948 yfcO ECDH10B_2494 - hypothetical protein 2286 48.70 0 2539838..2540377 - 179 170081949 yfcP ECDH10B_2495 - fimbrial-like adhesin protein 2287 46.63 0 2540374..2540862 - 162 170081950 yfcQ ECDH10B_2496 - fimbrial-like adhesin protein 2288 49.12 0 2540859..2541371 - 170 170081951 yfcR ECDH10B_2497 - fimbrial-like adhesin protein 2289 51.00 0 2541371..2542123 - 250 170081952 yfcS ECDH10B_2498 - periplasmic pilus chaperone 2290 53.29 0 2542143..2543039 - 298 170081953 yfcT ECDH10B_2499 - outer membrane export usher protein 2291 51.01 0 2543052..2544788 - 578 170081954 yfcU ECDH10B_2500 - export usher protein 2292 46.10 -1 2544870..2545433 - 187 170081955 yfcV ECDH10B_2502 - fimbrial-like adhesin protein 2293 53.29 0 2546114..2546599 - 161 170081956 sixA ECDH10B_2503 - phosphohistidine phosphatase 2294 52.26 0 2546802..2548946 - 714 170081957 fadJ ECDH10B_2504 - fused enoyl-CoA hydratase and epimerase and isomerase; 3-hydroxyacyl-CoA dehydrogenase 2295 55.84 0 2548946..2550256 - 436 170081958 yfcY ECDH10B_2505 - beta-ketoacyl-CoA thiolase, anaerobic, subunit 2296 51.58 0 2550437..2550721 - 94 170081959 yfcZ ECDH10B_2506 - hypothetical protein 2297 49.81 0 2551087..2552433 + 448 170081960 fadL ECDH10B_2507 - long-chain fatty acid outer membrane transporter 2298 35.51 -2 2552799..2553857 + 352 170081961 yfdF ECDH10B_2508 - hypothetical protein 2299 51.85 0 2554039..2554794 - 251 170081962 vacJ ECDH10B_2509 - lipoprotein 2300 48.55 0 2555088..2556020 + 310 170081963 yfdC ECDH10B_2510 - inner membrane protein 2301 47.75 0 2556332..2557489 + 385 170081964 intS ECDH10B_2512 - CPS-53 (KpLE1) prophage; prophage CPS-53 integrase 2302 46.01 -1 2557642..2558004 + 120 170081965 yfdG ECDH10B_2513 - CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) 2303 39.52 -2 2558001..2558921 + 306 170081966 yfdH ECDH10B_2514 - CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase 2304 27.55 -2 2558918..2560249 + 443 170081967 yfdI ECDH10B_2515 - CPS-53 (KpLE1) prophage; inner membrane protein 2305 45.58 -1 2560864..2561304 - 146 170081968 yfdK ECDH10B_2517 - CPS-53 (KpLE1) prophage; hypothetical protein 2306 49.52 0 2561331..2561849 - 172 170081969 yfdL ECDH10B_2518 - CPS-53 (KpLE1) prophage; hypothetical protein 2307 52.54 0 2561899..2562174 - 91 170081970 yfdM ECDH10B_2519 - CPS-53 (KpLE1) prophage; methyltransferase 2308 54.34 0 2562174..2562668 - 164 170081971 yfdN ECDH10B_2520 - CPS-53 (KpLE1) prophage; hypothetical protein 2309 56.10 +1 2562665..2563033 - 122 170081972 yfdO ECDH10B_2521 - CPS-53 (KpLE1) prophage; defective phage replication protein O 2310 49.44 0 2563307..2563753 + 148 170081973 yfdP ECDH10B_2522 - CPS-53 (KpLE1) prophage; hypothetical protein 2311 45.70 -1 2563819..2564643 + 274 170081974 yfdQ ECDH10B_2523 - CPS-53 (KpLE1) prophage; hypothetical protein 2312 46.18 -1 2564771..2565307 + 178 170081975 yfdR ECDH10B_2524 - CPS-53 (KpLE1) prophage; hypothetical protein 2313 47.11 0 2565298..2565660 + 120 170081976 yfdS ECDH10B_2525 - CPS-53 (KpLE1) prophage; hypothetical protein 2314 42.81 -1 2565660..2565965 + 101 170081977 yfdT ECDH10B_2526 - CPS-53 (KpLE1) prophage; hypothetical protein 2315 43.26 -1 2565881..2566021 + 46 170081978 ypdJ ECDH10B_2527 - hypothetical protein 2316 43.78 -1 2566097..2566297 + 66 170081979 torI ECDH10B_2528 - response regulator inhibitor for tor operon 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0