version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2141 53.32 0 2367580..2368770 - 396 170081804 bcr ECDH10B_2340 - bicyclomycin/multidrug efflux system 2142 52.87 0 2368798..2369493 - 231 170081805 rsuA ECDH10B_2341 - 16S rRNA pseudouridylate 516 synthase 2143 53.15 0 2369642..2371402 + 586 170081806 yejH ECDH10B_2342 - ATP-dependet helicase 2144 50.53 0 2371527..2371811 + 94 170081807 rplY ECDH10B_2343 - 50S ribosomal subunit protein L25 2145 52.28 0 2371950..2372957 - 335 170081808 yejK ECDH10B_2344 - nucleotide associated protein 2146 50.44 0 2373139..2373366 + 75 170081809 yejL ECDH10B_2345 - hypothetical protein 2147 52.07 0 2373386..2375146 + 586 170081810 yejM ECDH10B_2346 - hydrolase, inner membrane 2148 48.35 0 2375400..2377910 - 836 170081811 yejO ECDH10B_2348 - autotransporter outer membrane protein 2149 54.67 0 2378075..2379091 - 338 170081812 insH-8 ECDH10B_2349 - IS5 transposase and trans-activator 2150 52.47 0 2379510..2380157 + 215 170081813 narP ECDH10B_2350 - DNA-binding response regulator in two-component regulatory system with NarQ or NarX 2151 54.04 0 2380368..2381420 - 350 170081814 ccmH ECDH10B_2351 - heme lyase, CcmH subunit 2152 54.48 0 2381417..2381974 - 185 170081815 ccmG ECDH10B_2352 - periplasmic thioredoxin of cytochrome c-type biogenesis 2153 57.10 +1 2381971..2383914 - 647 170081816 ccmF ECDH10B_2353 - heme lyase, CcmF subunit 2154 53.54 0 2383911..2384390 - 159 170081817 ccmE ECDH10B_2354 - periplasmic heme chaperone 2155 57.14 +1 2384387..2384596 - 69 170081818 ccmD ECDH10B_2355 - cytochrome c biogenesis protein 2156 55.28 0 2384593..2385330 - 245 170081819 ccmC ECDH10B_2356 - heme ABC transporter membrane protein 2157 55.96 +1 2385372..2386034 - 220 170081820 ccmB ECDH10B_2357 - heme ABC transporter membrane protein 2158 55.93 +1 2386031..2386654 - 207 170081821 ccmA ECDH10B_2358 - heme ABC transporter ATP-binding protein 2159 51.58 0 2386667..2387269 - 200 170081822 napC ECDH10B_2359 - nitrate reductase, cytochrome c-type,periplasmic 2160 55.56 0 2387279..2387728 - 149 170081823 napB ECDH10B_2360 - nitrate reductase, small, cytochrome C550 subunit, periplasmic 2161 55.90 +1 2387725..2388588 - 287 170081824 napH ECDH10B_2361 - ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) 2162 59.05 +1 2388575..2389270 - 231 170081825 napG ECDH10B_2362 - ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) 2163 56.13 +1 2389277..2391763 - 828 170081826 napA ECDH10B_2363 - nitrate reductase, periplasmic, large subunit 2164 54.55 0 2391760..2392023 - 87 170081827 napD ECDH10B_2364 - assembly protein for periplasmic nitrate reductase 2165 55.35 0 2392013..2392507 - 164 170081828 napF ECDH10B_2365 - ferredoxin-type protein, role in electron transfer to periplasmic nitrate reductase (NapA) 2166 49.49 0 2392915..2393403 + 162 170081829 eco ECDH10B_2366 - ecotin, a serine protease inhibitor 2167 54.04 0 2394118..2395764 - 548 170081830 mqo ECDH10B_2367 - malate dehydrogenase FAD/NAD(P)-binding subunit 2168 53.41 0 2395982..2397625 - 547 170081831 yojI ECDH10B_2368 - multidrug ABC transporter membrane protein/ATP-binding protein 2169 52.69 0 2397701..2398351 - 216 170081832 alkB ECDH10B_2369 - oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions 2170 56.90 +1 2398351..2399415 - 354 170081833 ada ECDH10B_2370 - fused DNA-binding transcriptional dual regulator; O6-methylguanine-DNA methyltransferase 2171 53.41 0 2399489..2400544 - 351 170081834 yojL ECDH10B_2371 - thiamine biosynthesis lipoprotein 2172 50.63 0 2400656..2401759 - 367 170081835 ompC ECDH10B_2372 - outer membrane porin protein C 2173 49.38 0 2402498..2405170 + 890 170081836 rcsD ECDH10B_2374 - phosphotransfer intermediate protein in two-component regulatory system with RcsBC 2174 47.77 0 2405187..2405837 + 216 170081837 rcsB ECDH10B_2375 - DNA-binding response regulator in two-component regulatory system with RcsC and YojN 2175 50.91 0 2406037..2408886 - 949 170081838 rcsC ECDH10B_2376 - hybrid sensory kinase in two-component regulatory system with RcsB and YojN 2176 48.55 0 2409053..2410879 + 608 170081839 atoS ECDH10B_2377 - sensory histidine kinase in two-component regulatory system with AtoC 2177 48.99 0 2410876..2412261 + 461 170081840 atoC ECDH10B_2378 - fused response regulator of ato operon, in two-component system with AtoS: response regulator and sigma 54 interaction protein 2178 53.85 0 2412457..2413119 + 220 170081841 atoD ECDH10B_2379 - acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit 2179 53.61 0 2413119..2413769 + 216 170081842 atoA ECDH10B_2380 - acetyl-CoA:acetoacetyl-CoA transferase, beta subunit 2180 53.06 0 2413766..2415088 + 440 170081843 atoE ECDH10B_2381 - short chain fatty acid transporter 2181 53.00 0 2415119..2416303 + 394 170081844 atoB ECDH10B_2382 - acetyl-CoA acetyltransferase 2182 52.51 0 2416377..2417153 - 258 170081845 yfaP ECDH10B_2383 - hypothetical protein 2183 54.61 0 2417158..2418807 - 549 170081846 yfaQ ECDH10B_2384 - hypothetical protein 2184 51.44 0 2423346..2423969 - 207 170081847 yfaT ECDH10B_2388 - hypothetical protein 2185 51.15 0 2423966..2425654 - 562 170081848 yfaA ECDH10B_2389 - hypothetical protein 2186 54.00 0 2425803..2428430 - 875 170081849 gyrA ECDH10B_2390 - DNA gyrase (type II topoisomerase), subunit A 2187 54.22 0 2428577..2429299 + 240 170081850 ubiG ECDH10B_2391 - bifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase 2188 51.37 0 2429427..2433179 - 1250 170081851 yfaL ECDH10B_2392 - adhesin 2189 53.67 0 2433875..2436160 + 761 170081852 nrdA ECDH10B_2393 - ribonucleoside diphosphate reductase 1, alpha subunit 2190 50.57 0 2436394..2437524 + 376 170081853 nrdB ECDH10B_2394 - ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein 2191 56.08 +1 2437524..2437778 + 84 170081854 yfaE ECDH10B_2395 - 2Fe-2S cluster-containing protein 2192 49.46 0 2437832..2438482 - 216 170081855 inaA ECDH10B_2396 - hypothetical protein 2193 41.55 -2 2438697..2438903 + 68 170081856 yfaH ECDH10B_2397 - hypothetical protein 2194 45.59 -1 2438945..2440021 - 358 170081857 glpQ ECDH10B_2398 - periplasmic glycerophosphodiester phosphodiesterase 2195 52.61 0 2440026..2441384 - 452 170081858 glpT ECDH10B_2399 - sn-glycerol-3-phosphate transporter 2196 57.34 +1 2441657..2443285 + 542 170081859 glpA ECDH10B_2400 - sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding 2197 55.87 0 2443275..2444534 + 419 170081860 glpB ECDH10B_2401 - sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit 2198 53.99 0 2444531..2445721 + 396 170081861 glpC ECDH10B_2402 - sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit 2199 48.33 0 2445914..2446813 + 299 170081862 yfaD ECDH10B_2403 - hypothetical protein 2200 53.61 0 2447052..2447855 - 267 170081863 yfaU ECDH10B_2405 - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 2201 52.71 0 2447873..2449162 - 429 170081864 yfaV ECDH10B_2406 - transporter 2202 52.05 0 2449219..2450436 - 405 170081865 yfaW ECDH10B_2407 - enolase 2203 50.96 0 2450439..2451221 - 260 170081866 yfaX ECDH10B_2408 - DNA-binding transcriptional regulator 2204 54.20 0 2451441..2452643 - 400 170081867 yfaY ECDH10B_2409 - hypothetical protein 2205 53.22 0 2452743..2453285 - 180 170081868 yfaZ ECDH10B_2410 - outer membrane porin protein 2206 47.65 0 2453564..2453989 + 141 170081869 yfaO ECDH10B_2411 - NUDIX hydrolase 2207 43.28 -1 2454028..2454630 - 200 170081870 ais ECDH10B_2412 - hypothetical protein 2208 51.32 0 2454938..2456077 + 379 170081871 arnB ECDH10B_2413 - UDP-4-amino-4-deoxy-L-arabinose alpha-ketoglutarate aminotransferase 2209 49.85 0 2456081..2457049 + 322 170081872 arnC ECDH10B_2414 - undecaprenyl-phosphate 4-amino-4-deoxy-L-arabinose transferase 2210 51.13 0 2457049..2459031 + 660 170081873 arnA ECDH10B_2415 - fused UDP-L-Ara4N formyltransferase; UDP-GlcA C-4'-decarboxylase 2211 52.86 0 2459028..2459918 + 296 170081874 yfbH ECDH10B_2416 - hypothetical protein 2212 51.00 0 2459918..2461570 + 550 170081875 arnT ECDH10B_2417 - 4-amino-4-deoxy-L-arabinose transferase 2213 53.57 0 2461567..2461902 + 111 170081876 yfbW ECDH10B_2418 - hypothetical protein 2214 48.58 0 2461902..2462288 + 128 170081877 yfbJ ECDH10B_2419 - inner membrane protein 2215 46.82 0 2462282..2462548 - 88 170081878 pmrD ECDH10B_2420 - polymyxin resistance protein B 2216 56.05 +1 2462658..2464013 - 451 170081879 menE ECDH10B_2421 - o-succinylbenzoate-CoA ligase 2217 58.98 +1 2464010..2464972 - 320 170081880 menC ECDH10B_2422 - o-succinylbenzoyl-CoA synthase 2218 55.59 0 2464972..2465829 - 285 170081881 menB ECDH10B_2423 - dihydroxynaphthoic acid synthetase 2219 56.13 +1 2465844..2466602 - 252 170081882 yfbB ECDH10B_2424 - peptidase 2220 58.11 +1 2466599..2468269 - 556 170081883 menD ECDH10B_2425 - bifunctional 2-oxoglutarate decarboxylase and SHCHC synthase 2221 53.40 0 2468358..2469653 - 431 170081884 menF ECDH10B_2426 - isochorismate synthase 2 2222 51.96 0 2469732..2470037 - 101 170081885 elaB ECDH10B_2427 - hypothetical protein 2223 47.84 0 2470092..2470553 - 153 170081886 elaA ECDH10B_2428 - acyltransferase 2224 35.40 -2 2472500..2473711 + 403 170081887 elaD ECDH10B_2431 - hypothetical protein 2225 45.06 -1 2475647..2476618 + 323 170081888 yfbL ECDH10B_2433 - peptidase 2226 45.63 -1 2476721..2477224 + 167 170081889 yfbM ECDH10B_2434 - hypothetical protein 2227 39.05 -2 2477497..2478213 - 238 170081890 yfbN ECDH10B_2435 - hypothetical protein 2228 38.36 -2 2478368..2478844 + 158 170081891 yfbO ECDH10B_2436 - hypothetical protein 2229 43.43 -1 2478900..2479751 + 283 170081892 yfbP ECDH10B_2437 - hypothetical protein 2230 57.43 +1 2479835..2481112 - 425 170081893 nuoN ECDH10B_2438 - NADH:ubiquinone oxidoreductase, membrane subunit N 2231 54.71 0 2481299..2482828 - 509 170081894 nuoM ECDH10B_2439 - NADH:ubiquinone oxidoreductase, membrane subunit M 2232 57.17 +1 2482992..2484833 - 613 170081895 nuoL ECDH10B_2440 - NADH:ubiquinone oxidoreductase, membrane subunit L 2233 54.79 0 2484830..2485132 - 100 170081896 nuoK ECDH10B_2441 - NADH:ubiquinone oxidoreductase, membrane subunit K 2234 53.87 0 2485129..2485683 - 184 170081897 nuoJ ECDH10B_2442 - NADH:ubiquinone oxidoreductase, membrane subunit J 2235 54.33 0 2485695..2486237 - 180 170081898 nuoI ECDH10B_2443 - NADH:ubiquinone oxidoreductase, chain I 2236 54.19 0 2486252..2487229 - 325 170081899 nuoH ECDH10B_2444 - NADH:ubiquinone oxidoreductase, membrane subunit H 2237 56.35 +1 2487226..2489958 - 910 170081900 nuoG ECDH10B_2445 - NADH:ubiquinone oxidoreductase, chain G 2238 56.20 +1 2490005..2491342 - 445 170081901 nuoF ECDH10B_2446 - NADH:ubiquinone oxidoreductase, chain F 2239 55.29 0 2491339..2491839 - 166 170081902 nuoE ECDH10B_2447 - NADH:ubiquinone oxidoreductase, chain E 2240 55.74 0 2491842..2493644 - 600 170081903 nuoC ECDH10B_2448 - NADH:ubiquinone oxidoreductase, chain C,D 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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