version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2116 53.74 0 2337748..2338629 - 293 170081779 yeiE ECDH10B_2314 - DNA-binding transcriptional regulator 2117 53.05 0 2338728..2339777 + 349 170081780 yeiH ECDH10B_2315 - inner membrane protein 2118 52.45 0 2339851..2340708 + 285 170081781 nfo ECDH10B_2316 - endonuclease IV with intrinsic 3'-5' exonuclease activity 2119 51.79 0 2340711..2341799 + 362 170081782 yeiI ECDH10B_2317 - kinase 2120 50.44 0 2341906..2343156 - 416 170081783 yeiJ ECDH10B_2318 - nucleoside transporter 2121 52.02 0 2343256..2344197 - 313 170081784 rihB ECDH10B_2319 - ribonucleoside hydrolase 2 2122 45.00 -1 2344366..2345025 + 219 170081785 yeiL ECDH10B_2320 - DNA-binding transcriptional activator of stationary phase nitrogen survival 2123 51.08 0 2345096..2346346 - 416 170081786 yeiM ECDH10B_2321 - nucleoside transporter 2124 49.73 0 2346440..2347378 - 312 170081787 yeiN ECDH10B_2322 - hypothetical protein 2125 47.03 0 2347366..2348307 - 313 170081788 yeiC ECDH10B_2323 - kinase 2126 55.73 0 2348730..2350421 - 563 170081789 fruA ECDH10B_2324 - fused fructose-specific PTS enzymes: iibcomponent; IIC components 2127 53.46 0 2350438..2351376 - 312 170081790 fruK ECDH10B_2325 - fructose-1-phosphate kinase 2128 53.05 0 2352873..2354054 + 393 170081791 setB ECDH10B_2327 - lactose/glucose efflux system 2129 55.69 0 2354051..2354305 - 84 170081792 yeiW ECDH10B_2328 - hypothetical protein 2130 49.91 0 2354460..2355032 + 190 170081793 yeiP ECDH10B_2329 - elongtion factor 2131 52.01 0 2355255..2356721 + 488 170081794 yeiQ ECDH10B_2330 - dehydrogenase, NAD-dependent 2132 54.51 0 2356839..2357825 + 328 170081795 yeiR ECDH10B_2331 - hypothetical protein 2133 44.12 -1 2357864..2358577 + 237 170081796 yeiU ECDH10B_2332 - undecaprenyl pyrophosphate phosphatase 2134 46.74 0 2358989..2359555 + 188 170081797 spr ECDH10B_2333 - peptidase, outer membrane lipoprotein 2135 50.55 0 2359736..2361292 + 518 170081798 rtn ECDH10B_2334 - EAL domain-containing protein 2136 51.18 0 2361374..2363188 + 604 170081799 yejA ECDH10B_2335 - oligopeptide ABC transporter periplasmic-binding protein 2137 51.23 0 2363189..2364283 + 364 170081800 yejB ECDH10B_2336 - oligopeptide ABC transporter membrane protein 2138 52.73 0 2364283..2365308 + 341 170081801 yejE ECDH10B_2337 - oligopeptide ABC transporter membrane protein 2139 51.38 0 2365310..2366899 + 529 170081802 yejF ECDH10B_2338 - fused oligopeptide transporter subunits of ABC superfamilly: ATP-binding components 2140 48.70 0 2366903..2367247 - 114 170081803 yejG ECDH10B_2339 - hypothetical protein 2141 53.32 0 2367580..2368770 - 396 170081804 bcr ECDH10B_2340 - bicyclomycin/multidrug efflux system 2142 52.87 0 2368798..2369493 - 231 170081805 rsuA ECDH10B_2341 - 16S rRNA pseudouridylate 516 synthase 2143 53.15 0 2369642..2371402 + 586 170081806 yejH ECDH10B_2342 - ATP-dependet helicase 2144 50.53 0 2371527..2371811 + 94 170081807 rplY ECDH10B_2343 - 50S ribosomal subunit protein L25 2145 52.28 0 2371950..2372957 - 335 170081808 yejK ECDH10B_2344 - nucleotide associated protein 2146 50.44 0 2373139..2373366 + 75 170081809 yejL ECDH10B_2345 - hypothetical protein 2147 52.07 0 2373386..2375146 + 586 170081810 yejM ECDH10B_2346 - hydrolase, inner membrane 2148 48.35 0 2375400..2377910 - 836 170081811 yejO ECDH10B_2348 - autotransporter outer membrane protein 2149 54.67 0 2378075..2379091 - 338 170081812 insH-8 ECDH10B_2349 - IS5 transposase and trans-activator 2150 52.47 0 2379510..2380157 + 215 170081813 narP ECDH10B_2350 - DNA-binding response regulator in two-component regulatory system with NarQ or NarX 2151 54.04 0 2380368..2381420 - 350 170081814 ccmH ECDH10B_2351 - heme lyase, CcmH subunit 2152 54.48 0 2381417..2381974 - 185 170081815 ccmG ECDH10B_2352 - periplasmic thioredoxin of cytochrome c-type biogenesis 2153 57.10 +1 2381971..2383914 - 647 170081816 ccmF ECDH10B_2353 - heme lyase, CcmF subunit 2154 53.54 0 2383911..2384390 - 159 170081817 ccmE ECDH10B_2354 - periplasmic heme chaperone 2155 57.14 +1 2384387..2384596 - 69 170081818 ccmD ECDH10B_2355 - cytochrome c biogenesis protein 2156 55.28 0 2384593..2385330 - 245 170081819 ccmC ECDH10B_2356 - heme ABC transporter membrane protein 2157 55.96 +1 2385372..2386034 - 220 170081820 ccmB ECDH10B_2357 - heme ABC transporter membrane protein 2158 55.93 +1 2386031..2386654 - 207 170081821 ccmA ECDH10B_2358 - heme ABC transporter ATP-binding protein 2159 51.58 0 2386667..2387269 - 200 170081822 napC ECDH10B_2359 - nitrate reductase, cytochrome c-type,periplasmic 2160 55.56 0 2387279..2387728 - 149 170081823 napB ECDH10B_2360 - nitrate reductase, small, cytochrome C550 subunit, periplasmic 2161 55.90 +1 2387725..2388588 - 287 170081824 napH ECDH10B_2361 - ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) 2162 59.05 +1 2388575..2389270 - 231 170081825 napG ECDH10B_2362 - ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) 2163 56.13 +1 2389277..2391763 - 828 170081826 napA ECDH10B_2363 - nitrate reductase, periplasmic, large subunit 2164 54.55 0 2391760..2392023 - 87 170081827 napD ECDH10B_2364 - assembly protein for periplasmic nitrate reductase 2165 55.35 0 2392013..2392507 - 164 170081828 napF ECDH10B_2365 - ferredoxin-type protein, role in electron transfer to periplasmic nitrate reductase (NapA) 2166 49.49 0 2392915..2393403 + 162 170081829 eco ECDH10B_2366 - ecotin, a serine protease inhibitor 2167 54.04 0 2394118..2395764 - 548 170081830 mqo ECDH10B_2367 - malate dehydrogenase FAD/NAD(P)-binding subunit 2168 53.41 0 2395982..2397625 - 547 170081831 yojI ECDH10B_2368 - multidrug ABC transporter membrane protein/ATP-binding protein 2169 52.69 0 2397701..2398351 - 216 170081832 alkB ECDH10B_2369 - oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions 2170 56.90 +1 2398351..2399415 - 354 170081833 ada ECDH10B_2370 - fused DNA-binding transcriptional dual regulator; O6-methylguanine-DNA methyltransferase 2171 53.41 0 2399489..2400544 - 351 170081834 yojL ECDH10B_2371 - thiamine biosynthesis lipoprotein 2172 50.63 0 2400656..2401759 - 367 170081835 ompC ECDH10B_2372 - outer membrane porin protein C 2173 49.38 0 2402498..2405170 + 890 170081836 rcsD ECDH10B_2374 - phosphotransfer intermediate protein in two-component regulatory system with RcsBC 2174 47.77 0 2405187..2405837 + 216 170081837 rcsB ECDH10B_2375 - DNA-binding response regulator in two-component regulatory system with RcsC and YojN 2175 50.91 0 2406037..2408886 - 949 170081838 rcsC ECDH10B_2376 - hybrid sensory kinase in two-component regulatory system with RcsB and YojN 2176 48.55 0 2409053..2410879 + 608 170081839 atoS ECDH10B_2377 - sensory histidine kinase in two-component regulatory system with AtoC 2177 48.99 0 2410876..2412261 + 461 170081840 atoC ECDH10B_2378 - fused response regulator of ato operon, in two-component system with AtoS: response regulator and sigma 54 interaction protein 2178 53.85 0 2412457..2413119 + 220 170081841 atoD ECDH10B_2379 - acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit 2179 53.61 0 2413119..2413769 + 216 170081842 atoA ECDH10B_2380 - acetyl-CoA:acetoacetyl-CoA transferase, beta subunit 2180 53.06 0 2413766..2415088 + 440 170081843 atoE ECDH10B_2381 - short chain fatty acid transporter 2181 53.00 0 2415119..2416303 + 394 170081844 atoB ECDH10B_2382 - acetyl-CoA acetyltransferase 2182 52.51 0 2416377..2417153 - 258 170081845 yfaP ECDH10B_2383 - hypothetical protein 2183 54.61 0 2417158..2418807 - 549 170081846 yfaQ ECDH10B_2384 - hypothetical protein 2184 51.44 0 2423346..2423969 - 207 170081847 yfaT ECDH10B_2388 - hypothetical protein 2185 51.15 0 2423966..2425654 - 562 170081848 yfaA ECDH10B_2389 - hypothetical protein 2186 54.00 0 2425803..2428430 - 875 170081849 gyrA ECDH10B_2390 - DNA gyrase (type II topoisomerase), subunit A 2187 54.22 0 2428577..2429299 + 240 170081850 ubiG ECDH10B_2391 - bifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase 2188 51.37 0 2429427..2433179 - 1250 170081851 yfaL ECDH10B_2392 - adhesin 2189 53.67 0 2433875..2436160 + 761 170081852 nrdA ECDH10B_2393 - ribonucleoside diphosphate reductase 1, alpha subunit 2190 50.57 0 2436394..2437524 + 376 170081853 nrdB ECDH10B_2394 - ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein 2191 56.08 +1 2437524..2437778 + 84 170081854 yfaE ECDH10B_2395 - 2Fe-2S cluster-containing protein 2192 49.46 0 2437832..2438482 - 216 170081855 inaA ECDH10B_2396 - hypothetical protein 2193 41.55 -2 2438697..2438903 + 68 170081856 yfaH ECDH10B_2397 - hypothetical protein 2194 45.59 -1 2438945..2440021 - 358 170081857 glpQ ECDH10B_2398 - periplasmic glycerophosphodiester phosphodiesterase 2195 52.61 0 2440026..2441384 - 452 170081858 glpT ECDH10B_2399 - sn-glycerol-3-phosphate transporter 2196 57.34 +1 2441657..2443285 + 542 170081859 glpA ECDH10B_2400 - sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding 2197 55.87 0 2443275..2444534 + 419 170081860 glpB ECDH10B_2401 - sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit 2198 53.99 0 2444531..2445721 + 396 170081861 glpC ECDH10B_2402 - sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit 2199 48.33 0 2445914..2446813 + 299 170081862 yfaD ECDH10B_2403 - hypothetical protein 2200 53.61 0 2447052..2447855 - 267 170081863 yfaU ECDH10B_2405 - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 2201 52.71 0 2447873..2449162 - 429 170081864 yfaV ECDH10B_2406 - transporter 2202 52.05 0 2449219..2450436 - 405 170081865 yfaW ECDH10B_2407 - enolase 2203 50.96 0 2450439..2451221 - 260 170081866 yfaX ECDH10B_2408 - DNA-binding transcriptional regulator 2204 54.20 0 2451441..2452643 - 400 170081867 yfaY ECDH10B_2409 - hypothetical protein 2205 53.22 0 2452743..2453285 - 180 170081868 yfaZ ECDH10B_2410 - outer membrane porin protein 2206 47.65 0 2453564..2453989 + 141 170081869 yfaO ECDH10B_2411 - NUDIX hydrolase 2207 43.28 -1 2454028..2454630 - 200 170081870 ais ECDH10B_2412 - hypothetical protein 2208 51.32 0 2454938..2456077 + 379 170081871 arnB ECDH10B_2413 - UDP-4-amino-4-deoxy-L-arabinose alpha-ketoglutarate aminotransferase 2209 49.85 0 2456081..2457049 + 322 170081872 arnC ECDH10B_2414 - undecaprenyl-phosphate 4-amino-4-deoxy-L-arabinose transferase 2210 51.13 0 2457049..2459031 + 660 170081873 arnA ECDH10B_2415 - fused UDP-L-Ara4N formyltransferase; UDP-GlcA C-4'-decarboxylase 2211 52.86 0 2459028..2459918 + 296 170081874 yfbH ECDH10B_2416 - hypothetical protein 2212 51.00 0 2459918..2461570 + 550 170081875 arnT ECDH10B_2417 - 4-amino-4-deoxy-L-arabinose transferase 2213 53.57 0 2461567..2461902 + 111 170081876 yfbW ECDH10B_2418 - hypothetical protein 2214 48.58 0 2461902..2462288 + 128 170081877 yfbJ ECDH10B_2419 - inner membrane protein 2215 46.82 0 2462282..2462548 - 88 170081878 pmrD ECDH10B_2420 - polymyxin resistance protein B 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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