version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1936 51.39 0 2115355..2117049 - 564 170081599 yedQ ECDH10B_2098 - diguanylate cyclase 1937 53.01 0 2117220..2117402 - 60 170081600 yodC ECDH10B_2099 - hypothetical protein 1938 53.05 0 2117481..2118398 - 305 170081601 yedI ECDH10B_2100 - inner membrane protein 1939 53.64 0 2118571..2119491 + 306 170081602 yedA ECDH10B_2101 - inner membrane protein 1940 56.05 +1 2119480..2119950 - 156 170081603 vsr ECDH10B_2102 - DNA mismatch endonuclease of very short patch repair 1941 52.15 0 2119931..2121349 - 472 170081604 dcm ECDH10B_2103 - DNA cytosine methylase 1942 54.45 0 2121416..2122111 - 231 170081605 yedJ ECDH10B_2104 - phosphohydrolase 1943 50.00 0 2122151..2122516 - 121 170081606 yedR ECDH10B_2105 - inner membrane protein 1944 48.59 0 2124867..2125718 + 283 170081607 hchA ECDH10B_2110 - Hsp31 molecular chaperone 1945 39.66 -2 2125826..2127184 - 452 170081608 yedV ECDH10B_2111 - sensory kinase in two-component regulatory system with YedW 1946 44.79 -1 2127184..2127855 - 223 170081609 yedW ECDH10B_2112 - DNA-binding response regulator in two-component system with YedV 1947 41.79 -1 2127988..2128401 + 137 170081610 yedX ECDH10B_2113 - hypothetical protein 1948 47.96 0 2129515..2130150 + 211 170081611 yedZ ECDH10B_2115 - inner membrane protein 1949 38.25 -2 2130407..2131057 + 216 170081612 yodA ECDH10B_2116 - metal-binding protein 1950 42.18 -1 2131400..2131930 + 176 170081613 yodB ECDH10B_2117 - cytochrome 1951 45.86 -1 2132683..2133480 + 265 170081614 yeeI ECDH10B_2119 - hypothetical protein 1952 49.99 0 2133943..2141046 + 2367 170081615 yeeJ ECDH10B_2121 - adhesin 1953 50.42 0 2142675..2143991 + 438 170081616 shiA ECDH10B_2125 - shikimate transporter 1954 50.24 0 2144093..2145547 + 484 170081617 amn ECDH10B_2126 - AMP nucleosidase 1955 39.89 -2 2145890..2146606 + 238 170081618 yeeN ECDH10B_2127 - hypothetical protein 1956 48.30 0 2147235..2148878 - 547 170081619 yeeO ECDH10B_2129 - multidrug efflux system 1957 48.26 0 2148996..2149946 - 316 170081620 cbl ECDH10B_2131 - DNA-binding transcriptional activator of cysteine biosynthesis 1958 48.15 0 2150048..2150965 - 305 170081621 nac ECDH10B_2132 - DNA-binding transcriptional dual regulator of nitrogen assimilation 1959 49.62 0 2151423..2152355 - 310 170081622 erfK ECDH10B_2134 - hypothetical protein 1960 51.30 0 2152420..2153499 - 359 170081623 cobT ECDH10B_2135 - nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase 1961 53.49 0 2153511..2154254 - 247 170081624 cobS ECDH10B_2136 - cobalamin 5'-phosphate synthase 1962 50.55 0 2154251..2154796 - 181 170081625 cobU ECDH10B_2137 - bifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase 1963 54.67 0 2155337..2156353 - 338 170081626 insH-6 ECDH10B_2138 - CP4-44 prophage; IS5 transposase and trans-activator 1964 55.08 0 2157984..2158889 - 301 170081627 insD-3 ECDH10B_2141 - CP4-44 prophage; IS2 insertion element transposase InsAB' 1965 50.85 0 2158847..2159257 - 136 170081628 insC-3 ECDH10B_2142 - CP4-44 prophage; IS2 insertion element repressor InsA 1966 58.24 +1 2160571..2163690 + 1039 170081629 flu ECDH10B_2146 - CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter 1967 50.29 0 2163811..2165343 + 510 170081630 yeeR ECDH10B_2147 - CP4-44 prophage; membrane protein 1968 58.17 +1 2165340..2165786 + 148 170081631 yeeS ECDH10B_2148 - CP4-44 prophage; DNA repair protein 1969 52.70 0 2165849..2166070 + 73 170081632 yeeT ECDH10B_2149 - CP4-44 prophage; protein 1970 57.18 +1 2166144..2166512 + 122 170081633 yeeU ECDH10B_2150 - CP4-44 prophage; antitoxin of the YeeV-YeeU toxin-antitoxin system 1971 53.07 0 2166601..2166975 + 124 170081634 yeeV ECDH10B_2151 - CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system 1972 49.23 0 2166972..2167166 + 64 170081635 yeeW ECDH10B_2152 - CP4-44 prophage; protein 1973 48.46 0 2167607..2167963 + 118 170081636 yoeF ECDH10B_2153 - hypothetical protein 1974 46.97 0 2168064..2168459 - 131 170081637 yeeX ECDH10B_2154 - hypothetical protein 1975 50.80 0 2168565..2169623 - 352 170081638 yeeA ECDH10B_2155 - inner membrane protein 1976 47.26 0 2169821..2170294 - 157 170081639 sbmC ECDH10B_2156 - DNA gyrase inhibitor 1977 49.27 0 2170413..2171579 - 388 170081640 dacD ECDH10B_2157 - D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b) 1978 50.07 0 2171788..2173215 + 475 170081641 sbcB ECDH10B_2158 - exonuclease I 1979 50.44 0 2173258..2173485 - 75 170081642 yeeD ECDH10B_2159 - hypothetical protein 1980 50.42 0 2173499..2174557 - 352 170081643 yeeE ECDH10B_2160 - inner membrane protein 1981 52.69 0 2174736..2176094 - 452 170081644 yeeF ECDH10B_2161 - amino-acid transporter 1982 50.43 0 2176361..2177290 - 309 170081645 yeeY ECDH10B_2162 - DNA-binding transcriptional regulator 1983 51.88 0 2177336..2178160 - 274 170081646 yeeZ ECDH10B_2163 - epimerase 1984 44.31 -1 2178243..2178497 - 84 170081647 yoeB ECDH10B_2164 - toxin of the YoeB-YefM toxin-antitoxin system 1985 48.41 0 2178494..2178745 - 83 170081648 yefM ECDH10B_2165 - antitoxin of the YoeB-YefM toxin-antitoxin system 1986 43.14 -1 2179028..2179078 + 16 170081649 hisL ECDH10B_2166 - his operon leader peptide 1987 54.11 0 2179224..2180123 + 299 170081650 hisG ECDH10B_2167 - ATP phosphoribosyltransferase 1988 58.08 +1 2180129..2181433 + 434 170081651 hisD ECDH10B_2168 - bifunctional histidinal dehydrogenase and histidinol dehydrogenase 1989 55.37 0 2181430..2182500 + 356 170081652 hisC ECDH10B_2169 - histidinol-phosphate aminotransferase 1990 53.37 0 2182500..2183567 + 355 170081653 hisB ECDH10B_2170 - fused histidinol-phosphatase; imidazoleglycerol-phosphate dehydratase 1991 56.68 +1 2183567..2184157 + 196 170081654 hisH ECDH10B_2171 - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with HisF 1992 57.18 +1 2184157..2184894 + 245 170081655 hisA ECDH10B_2172 - N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase 1993 51.87 0 2184876..2185652 + 258 170081656 hisF ECDH10B_2173 - imidazole glycerol phosphate synthase, catalytic subunit with HisH 1994 54.58 0 2185646..2186257 + 203 170081657 hisI ECDH10B_2174 - fused phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphatase 1995 45.87 -1 2186353..2187333 - 326 170081658 cld ECDH10B_2175 - regulator of length of O-antigen component of lipopolysaccharide chains 1996 43.79 -1 2187479..2188645 - 388 170081659 ugd ECDH10B_2176 - UDP-glucose 6-dehydrogenase 1997 50.18 0 2188894..2190300 - 468 170081660 gnd ECDH10B_2177 - gluconate-6-phosphate dehydrogenase, decarboxylating 1998 54.67 0 2190927..2191943 - 338 170081661 insH-7 ECDH10B_2180 - IS5 transposase and trans-activator 1999 31.90 -2 2192423..2193541 - 372 170081662 wbbK ECDH10B_2182 - lipopolysaccharide biosynthesis protein 2000 40.61 -2 2193526..2194116 - 196 170081663 wbbJ ECDH10B_2183 - acyl transferase 2001 35.95 -2 2194097..2195089 - 330 170081664 wbbI ECDH10B_2184 - hypothetical protein 2002 32.31 -2 2195092..2196258 - 388 170081665 wbbH ECDH10B_2185 - O-antigen polymerase 2003 35.60 -2 2196258..2197361 - 367 170081666 glf ECDH10B_2186 - UDP-galactopyranose mutase, FAD/NAD(P)-binding 2004 35.42 -2 2197369..2198616 - 415 170081667 rfbX ECDH10B_2187 - polisoprenol-linked O-antigen transporter 2005 38.71 -2 2198613..2199170 - 185 170081668 rfbC ECDH10B_2188 - dTDP-4-deoxyrhamnose-3,5-epimerase 2006 42.74 -1 2199170..2200051 - 293 170081669 rfbA ECDH10B_2189 - glucose-1-phosphate thymidylyltransferase 2007 46.56 0 2200109..2201008 - 299 170081670 rfbD ECDH10B_2190 - dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase 2008 43.65 -1 2201008..2202093 - 361 170081671 rfbB ECDH10B_2191 - dTDP-glucose 4,6 dehydratase, NAD(P)-binding 2009 51.68 0 2202466..2203359 - 297 170081672 galF ECDH10B_2192 - subunit with GalU 2010 47.10 0 2203534..2204928 - 464 170081673 wcaM ECDH10B_2193 - colanic acid biosynthesis protein 2011 54.87 0 2204939..2206159 - 406 170081674 wcaL ECDH10B_2194 - glycosyl transferase 2012 54.33 0 2206156..2207436 - 426 170081675 wcaK ECDH10B_2195 - pyruvyl transferase 2013 54.09 0 2207712..2209190 - 492 170081676 wzxC ECDH10B_2196 - colanic acid exporter 2014 54.62 0 2209192..2210586 - 464 170081677 wcaJ ECDH10B_2197 - UDP-glucose lipid carrier transferase 2015 55.07 0 2210641..2212011 - 456 170081678 cpsG ECDH10B_2198 - phosphomannomutase 2016 55.18 0 2212116..2213552 - 478 170081679 cpsB ECDH10B_2199 - mannose-1-phosphate guanyltransferase 2017 55.56 0 2213555..2214778 - 407 170081680 wcaI ECDH10B_2200 - glycosyl transferase 2018 54.58 0 2214775..2215254 - 159 170081681 nudD ECDH10B_2201 - GDP-mannose mannosyl hydrolase 2019 56.42 +1 2215257..2216222 - 321 170081682 fcl ECDH10B_2202 - bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase and GDP-4-dehydro-6-L-deoxygalactose reductase 2020 54.81 0 2216225..2217346 - 373 170081683 gmd ECDH10B_2203 - GDP-D-mannose dehydratase, NAD(P)-binding 2021 47.91 0 2217372..2217920 - 182 170081684 wcaF ECDH10B_2204 - acyl transferase 2022 45.52 -1 2217936..2218682 - 248 170081685 wcaE ECDH10B_2205 - glycosyl transferase 2023 42.04 -1 2218693..2219910 - 405 170081686 wcaD ECDH10B_2206 - colanic acid polymerase 2024 53.61 0 2219885..2221102 - 405 170081687 wcaC ECDH10B_2207 - glycosyl transferase 2025 53.99 0 2221099..2221587 - 162 170081688 wcaB ECDH10B_2208 - acyl transferase 2026 51.55 0 2221590..2222429 - 279 170081689 wcaA ECDH10B_2209 - glycosyl transferase 2027 52.66 0 2222522..2224684 - 720 170081690 wzc ECDH10B_2210 - protein-tyrosine kinase 2028 54.50 0 2224687..2225130 - 147 170081691 wzb ECDH10B_2211 - protein-tyrosine phosphatase 2029 53.77 0 2225136..2226275 - 379 170081692 wza ECDH10B_2212 - lipoprotein required for capsular polysaccharide translocation through the outer membrane 2030 53.16 0 2226934..2228517 + 527 170081693 yegH ECDH10B_2213 - fused membrane protein; membrane protein 2031 52.54 0 2228791..2230644 - 617 170081694 asmA ECDH10B_2214 - assembly protein 2032 60.31 +1 2230666..2231247 - 193 170081695 dcd ECDH10B_2215 - 2'-deoxycytidine 5'-triphosphate deaminase 2033 48.75 0 2231339..2231980 - 213 170081696 udk ECDH10B_2216 - uridine/cytidine kinase 2034 52.35 0 2232298..2235615 + 1105 170081697 yegE ECDH10B_2217 - diguanylate cyclase domain-containing signalling protein 2035 55.59 0 2235724..2236572 - 282 170081698 alkA ECDH10B_2218 - 3-methyl-adenine DNA glycosylase II 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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