version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1847 52.81 0 2026244..2027686 + 480 170081510 pykA ECDH10B_1995 - pyruvate kinase II 1848 51.54 0 2027817..2028788 - 323 170081511 lpxM ECDH10B_1996 - myristoyl-acyl carrier protein (ACP)-dependent acyltransferase 1849 52.46 0 2028908..2030230 - 440 170081512 yebA ECDH10B_1997 - peptidase 1850 49.09 0 2030246..2031178 - 310 170081513 znuA ECDH10B_1998 - zinc ABC transporter periplasmic substrate-binding protein 1851 49.21 0 2031257..2032012 + 251 170081514 znuC ECDH10B_1999 - zinc ABC transporter ATP-binding protein 1852 51.91 0 2032009..2032794 + 261 170081515 znuB ECDH10B_2000 - zinc ABC transporter membrane protein 1853 52.72 0 2032941..2033951 - 336 170081516 ruvB ECDH10B_2001 - ATP-dependent DNA helicase, component of RuvABC resolvasome 1854 53.27 0 2033960..2034571 - 203 170081517 ruvA ECDH10B_2002 - component of RuvABC resolvasome, regulatory subunit 1855 44.11 -1 2034846..2035448 + 200 170081518 yebB ECDH10B_2003 - hypothetical protein 1856 55.94 +1 2035450..2035971 - 173 170081519 ruvC ECDH10B_2004 - component of RuvABC resolvasome, endonuclease 1857 52.23 0 2036006..2036746 - 246 170081520 yebC ECDH10B_2005 - hypothetical protein 1858 52.54 0 2036775..2037227 - 150 170081521 nudB ECDH10B_2006 - dATP pyrophosphohydrolase 1859 53.75 0 2037345..2039117 - 590 170081522 aspS ECDH10B_2007 - aspartyl-tRNA synthetase 1860 53.09 0 2039427..2039993 + 188 170081523 yecD ECDH10B_2008 - hydrolase 1861 51.04 0 2039990..2040808 + 272 170081524 yecE ECDH10B_2009 - hypothetical protein 1862 50.76 0 2040861..2041256 + 131 170081525 yecN ECDH10B_2010 - inner membrane protein 1863 50.67 0 2041297..2042040 + 247 170081526 yecO ECDH10B_2011 - methyltransferase 1864 52.06 0 2042037..2043008 + 323 170081527 yecP ECDH10B_2012 - S-adenosyl-L-methionine-dependent methyltransferase 1865 51.32 0 2043173..2045602 - 809 170081528 torZ ECDH10B_2013 - trimethylamine N-oxide reductase system III, catalytic subunit 1866 47.41 0 2045627..2046727 - 366 170081529 torY ECDH10B_2014 - TMAO reductase III (TorYZ), cytochrome c-type subunit 1867 51.94 0 2047115..2047861 - 248 170081530 cutC ECDH10B_2015 - copper homeostasis protein 1868 50.79 0 2047875..2048441 - 188 170081531 yecM ECDH10B_2016 - metal-binding protein 1869 53.29 0 2048657..2050390 + 577 170081532 argS ECDH10B_2017 - arginyl-tRNA synthetase 1870 38.85 -2 2050567..2051055 + 162 170081533 yecT ECDH10B_2018 - hypothetical protein 1871 52.67 0 2051175..2051567 - 130 170081534 flhE ECDH10B_2019 - hypothetical protein 1872 54.88 0 2051567..2053645 - 692 170081535 flhA ECDH10B_2020 - flagellar export pore protein 1873 54.92 0 2053638..2054786 - 382 170081536 flhB ECDH10B_2021 - flagellar export pore protein 1874 53.49 0 2054988..2055632 - 214 170081537 cheZ ECDH10B_2022 - chemotaxis regulator, protein phosphatase for CheY 1875 49.23 0 2055643..2056032 - 129 170081538 cheY ECDH10B_2023 - chemotaxis regulator transmitting signal to flagellar motor component 1876 54.29 0 2056047..2057096 - 349 170081539 cheB ECDH10B_2024 - fused chemotaxis regulator and protein-glutamate methylesterase in two-component regulatory system with CheA 1877 54.24 0 2057099..2057959 - 286 170081540 cheR ECDH10B_2025 - chemotaxis regulator, protein-glutamate methyltransferase 1878 53.56 0 2057978..2059579 - 533 170081541 tap ECDH10B_2026 - methyl-accepting protein IV 1879 52.77 0 2059625..2061286 - 553 170081542 tar ECDH10B_2027 - methyl-accepting chemotaxis protein II 1880 51.98 0 2061431..2061934 - 167 170081543 cheW ECDH10B_2028 - purine-binding chemotaxis protein 1881 53.18 0 2063924..2064850 - 308 170081544 motB ECDH10B_2030 - hypothetical protein 1882 51.35 0 2064847..2065734 - 295 170081545 motA ECDH10B_2031 - proton conductor component of flagella motor 1883 46.39 0 2066456..2066815 - 119 170081546 flhD ECDH10B_2033 - DNA-binding transcriptional dual regulator with FlhC 1884 44.99 -1 2068785..2069213 + 142 170081547 yecG ECDH10B_2036 - universal stress protein 1885 49.19 0 2069220..2070644 - 474 170081548 otsA ECDH10B_2037 - trehalose-6-phosphate synthase 1886 50.56 0 2070619..2071419 - 266 170081549 otsB ECDH10B_2038 - trehalose-6-phosphate phosphatase, biosynthetic 1887 51.11 0 2071586..2072575 - 329 170081550 araH ECDH10B_2039 - subunit of L-arabinose ABC transporter containing membrane components 1888 52.28 0 2072587..2074101 - 504 170081551 araG ECDH10B_2040 - subunit of L-arabinose ABC transporter containing ATP-binding components 1889 51.82 0 2074171..2075160 - 329 170081552 araF ECDH10B_2041 - periplasmic-binding component of L-arabinose ABC transporter (precursor) 1890 47.82 0 2075957..2076460 + 167 170081553 yecI ECDH10B_2042 - ferritin-like protein 1891 48.41 0 2076539..2076790 - 83 170081554 yecJ ECDH10B_2043 - hypothetical protein 1892 50.31 0 2077254..2077577 + 107 170081555 yecR ECDH10B_2045 - hypothetical protein 1893 42.77 -1 2077748..2078245 + 165 170081556 ftn ECDH10B_2046 - ferritin iron storage protein (cytoplasmic) 1894 47.08 0 2078283..2078522 - 79 170081557 yecH ECDH10B_2047 - hypothetical protein 1895 51.24 0 2078713..2079924 + 403 170081558 tyrP ECDH10B_2048 - tyrosine transporter 1896 53.00 0 2079986..2080651 - 221 170081559 yecA ECDH10B_2049 - metal-binding protein 1897 52.46 0 2081301..2081849 - 182 170081560 pgsA ECDH10B_2053 - phosphatidylglycerophosphate synthetase 1898 51.72 0 2081906..2083738 - 610 170081561 uvrC ECDH10B_2054 - excinuclease UvrABC, endonuclease subunit 1899 49.77 0 2083735..2084391 - 218 170081562 uvrY ECDH10B_2055 - DNA-binding response regulator in two-component regulatory system with BarA 1900 48.00 0 2084850..2085074 + 74 170081563 yecF ECDH10B_2056 - hypothetical protein 1901 46.75 0 2085142..2085864 - 240 170081564 sdiA ECDH10B_2057 - DNA-binding transcriptional activator 1902 54.32 0 2086094..2086846 - 250 170081565 yecC ECDH10B_2058 - ABC transporter ATP-binding protein 1903 52.77 0 2086843..2087511 - 222 170081566 yecS ECDH10B_2059 - ABC transporter membrane protein 1904 54.00 0 2087526..2088512 - 328 170081567 dcyD ECDH10B_2060 - D-cysteine desulfhydrase, PLP-dependent 1905 49.81 0 2088617..2089417 - 266 170081568 fliY ECDH10B_2061 - cysteine ABC transporter periplasmic substrate binding protein 1906 46.56 0 2089505..2090056 - 183 170081569 fliZ ECDH10B_2062 - regulator of FliA activity 1907 54.17 0 2090102..2090821 - 239 170081570 fliA ECDH10B_2063 - RNA polymerase, sigma 28 (sigma F) factor 1908 52.24 0 2092904..2094310 + 468 170081571 fliD ECDH10B_2065 - flagellar filament capping protein 1909 49.88 0 2094335..2094745 + 136 170081572 fliS ECDH10B_2066 - flagellar protein potentiates polymerization 1910 51.64 0 2094745..2095110 + 121 170081573 fliT ECDH10B_2067 - chaperone 1911 49.80 0 2095188..2096675 + 495 170081574 amyA ECDH10B_2068 - cytoplasmic alpha-amylase 1912 57.00 +1 2096709..2097122 - 137 170081575 yedD ECDH10B_2069 - hypothetical protein 1913 54.89 0 2097309..2098514 + 401 170081576 yedE ECDH10B_2070 - inner membrane protein 1914 48.29 0 2098511..2098744 + 77 170081577 yedF ECDH10B_2071 - hypothetical protein 1915 51.87 0 2098853..2099521 + 222 170081578 yedK ECDH10B_2072 - hypothetical protein 1916 47.08 0 2099632..2100111 + 159 170081579 yedL ECDH10B_2073 - acyltransferase 1917 31.62 -2 2101033..2101383 - 116 170081580 yedM ECDH10B_2077 - hypothetical protein 1918 53.97 0 2101732..2102046 - 104 170081581 fliE ECDH10B_2079 - flagellar basal-body component 1919 54.61 0 2102261..2103919 + 552 170081582 fliF ECDH10B_2080 - flagellar basal-body MS-ring and collar protein 1920 55.62 0 2103912..2104907 + 331 170081583 fliG ECDH10B_2081 - flagellar motor switching and energizing component 1921 57.06 +1 2104900..2105586 + 228 170081584 fliH ECDH10B_2082 - flagellar biosynthesis protein 1922 58.59 +1 2105586..2106959 + 457 170081585 fliI ECDH10B_2083 - flagellum-specific ATP synthase 1923 51.58 0 2106978..2107421 + 147 170081586 fliJ ECDH10B_2084 - flagellar protein 1924 54.88 0 2107418..2108545 + 375 170081587 fliK ECDH10B_2085 - flagellar hook-length control protein 1925 53.33 0 2108650..2109114 + 154 170081588 fliL ECDH10B_2086 - flagellar biosynthesis protein 1926 53.33 0 2109119..2110123 + 334 170081589 fliM ECDH10B_2087 - flagellar motor switching and energizing component 1927 55.07 0 2110120..2110533 + 137 170081590 fliN ECDH10B_2088 - flagellar motor switching and energizing component 1928 54.64 0 2110536..2110901 + 121 170081591 fliO ECDH10B_2089 - flagellar biosynthesis protein 1929 53.12 0 2110901..2111638 + 245 170081592 fliP ECDH10B_2090 - flagellar biosynthesis protein 1930 50.37 0 2111648..2111917 + 89 170081593 fliQ ECDH10B_2091 - flagellar biosynthesis protein 1931 47.46 0 2111925..2112710 + 261 170081594 fliR ECDH10B_2092 - flagellar export pore protein 1932 38.14 -2 2113000..2113623 + 207 170081595 rcsA ECDH10B_2093 - DNA-binding transcriptional activator, co-regulator with RcsB 1933 51.32 0 2113667..2113855 - 62 170081596 dsrB ECDH10B_2094 - hypothetical protein 1934 48.68 0 2114018..2114245 + 75 170081597 yodD ECDH10B_2095 - hypothetical protein 1935 52.08 0 2114543..2115358 + 271 170081598 yedP ECDH10B_2097 - hypothetical protein 1936 51.39 0 2115355..2117049 - 564 170081599 yedQ ECDH10B_2098 - diguanylate cyclase 1937 53.01 0 2117220..2117402 - 60 170081600 yodC ECDH10B_2099 - hypothetical protein 1938 53.05 0 2117481..2118398 - 305 170081601 yedI ECDH10B_2100 - inner membrane protein 1939 53.64 0 2118571..2119491 + 306 170081602 yedA ECDH10B_2101 - inner membrane protein 1940 56.05 +1 2119480..2119950 - 156 170081603 vsr ECDH10B_2102 - DNA mismatch endonuclease of very short patch repair 1941 52.15 0 2119931..2121349 - 472 170081604 dcm ECDH10B_2103 - DNA cytosine methylase 1942 54.45 0 2121416..2122111 - 231 170081605 yedJ ECDH10B_2104 - phosphohydrolase 1943 50.00 0 2122151..2122516 - 121 170081606 yedR ECDH10B_2105 - inner membrane protein 1944 48.59 0 2124867..2125718 + 283 170081607 hchA ECDH10B_2110 - Hsp31 molecular chaperone 1945 39.66 -2 2125826..2127184 - 452 170081608 yedV ECDH10B_2111 - sensory kinase in two-component regulatory system with YedW 1946 44.79 -1 2127184..2127855 - 223 170081609 yedW ECDH10B_2112 - DNA-binding response regulator in two-component system with YedV 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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